RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 AHNAK2Q8IVF2 5795 aa4.77□□□□□ -1.65
LINC00339-203ENST00000420503 LINC01558Q9Y6Z2 57 aa4.76□□□□□ -1.65
LINC00339-203ENST00000420503 A0A0D9SG42 100 aa4.71□□□□□ -1.66
LINC00339-203ENST00000420503 PCP4P48539 62 aa4.69□□□□□ -1.66
LINC00339-203ENST00000420503 PRR15LQ9BU68 103 aa4.69□□□□□ -1.66
LINC00339-203ENST00000420503 KRTAP12-1P59990 96 aa4.67□□□□□ -1.66
LINC00339-203ENST00000420503 KRTAP19-5Q3LI72 72 aa4.67□□□□□ -1.66
LINC00339-203ENST00000420503 KRTAP5-10Q6L8G5 202 aa4.66□□□□□ -1.66
LINC00339-203ENST00000420503 CAMK2N1Q7Z7J9 78 aa4.66□□□□□ -1.66
LINC00339-203ENST00000420503 SMIM26A0A096LP01 95 aa4.65□□□□□ -1.67
LINC00339-203ENST00000420503 A8MU10 97 aa4.64□□□□□ -1.67
LINC00339-203ENST00000420503 KRTAP4-3Q9BYR4 195 aa4.64□□□□□ -1.67
LINC00339-203ENST00000420503 MT1MQ8N339 61 aa4.63□□□□□ -1.67
LINC00339-203ENST00000420503 MT1GP13640 62 aa4.62□□□□□ -1.67
LINC00339-203ENST00000420503 SPINT4Q6UDR6 99 aa4.62□□□□□ -1.67
LINC00339-203ENST00000420503 Q1T7F1 81 aa4.59□□□□□ -1.67
LINC00339-203ENST00000420503 UQCR11O14957 56 aa4.58□□□□□ -1.68
LINC00339-203ENST00000420503 KRTAP5-4Q6L8H1 288 aa4.58□□□□□ -1.68
LINC00339-203ENST00000420503 V9GYY9 64 aa4.57□□□□□ -1.68
LINC00339-203ENST00000420503 MT1LQ93083 61 aa4.56□□□□□ -1.68
LINC00339-203ENST00000420503 RPS28P62857 69 aaKnown RBP4.54□□□□□ -1.68
LINC00339-203ENST00000420503 PP632Q6XCG6 107 aa4.53□□□□□ -1.68
LINC00339-203ENST00000420503 PSPHP1O15172 72 aa4.52□□□□□ -1.69
LINC00339-203ENST00000420503 KRTAP5-7Q6L8G8 165 aa4.49□□□□□ -1.69
LINC00339-203ENST00000420503 MIR22HGQ0VDD5 57 aa4.48□□□□□ -1.69
LINC00339-203ENST00000420503 C10orf95Q9H7T3 257 aa4.45□□□□□ -1.7
LINC00339-203ENST00000420503 LCE3AQ5TA76 89 aa4.4□□□□□ -1.71
LINC00339-203ENST00000420503 A6NED7 52 aa4.36□□□□□ -1.71
LINC00339-203ENST00000420503 KRTAP20-2Q3LI61 65 aa4.36□□□□□ -1.71
LINC00339-203ENST00000420503 TNP1P09430 55 aa4.35□□□□□ -1.71
LINC00339-203ENST00000420503 A0A0A0MQY5 61 aa4.34□□□□□ -1.71
LINC00339-203ENST00000420503 SPRR5A0A1B0GTR4 108 aa4.33□□□□□ -1.72
LINC00339-203ENST00000420503 K7ERS5 55 aa4.31□□□□□ -1.72
LINC00339-203ENST00000420503 KRTAP23-1A1A580 65 aa4.3□□□□□ -1.72
LINC00339-203ENST00000420503 KRTAP5-5Q701N2 237 aaPredicted RBP4.28□□□□□ -1.72
LINC00339-203ENST00000420503 CDC42SE1Q9NRR8 79 aa4.25□□□□□ -1.73
LINC00339-203ENST00000420503 KRTAP25-1Q3LHN0 102 aa4.22□□□□□ -1.73
LINC00339-203ENST00000420503 SYNE1Q8NF91 8797 aaKnown RBP4.2□□□□□ -1.74
LINC00339-203ENST00000420503 KRTAP12-3P60328 96 aa4.16□□□□□ -1.74
LINC00339-203ENST00000420503 KRTAP12-4P60329 112 aa4.14□□□□□ -1.75
LINC00339-203ENST00000420503 ROMO1P60602 79 aa4.1□□□□□ -1.75
LINC00339-203ENST00000420503 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.09□□□□□ -1.75
LINC00339-203ENST00000420503 AHNAKQ09666 5890 aaKnown RBP3.99□□□□□ -1.77
LINC00339-203ENST00000420503 BRK1Q8WUW1 75 aa3.98□□□□□ -1.77
LINC00339-203ENST00000420503 MUC5ACP98088 5654 aa3.96□□□□□ -1.78
LINC00339-203ENST00000420503 KRTAP5-2Q701N4 177 aa3.96□□□□□ -1.78
LINC00339-203ENST00000420503 KRTAP5-8O75690 187 aa3.95□□□□□ -1.78
LINC00339-203ENST00000420503 KRTAP15-1Q3LI76 137 aa3.92□□□□□ -1.78
LINC00339-203ENST00000420503 MUC5BQ9HC84 5762 aaPredicted RBP3.92□□□□□ -1.78
LINC00339-203ENST00000420503 KRTAP6-1Q3LI64 71 aa3.91□□□□□ -1.78
LINC00339-203ENST00000420503 KRTAP5-11Q6L8G4 156 aa3.9□□□□□ -1.79
LINC00339-203ENST00000420503 MT1AP04731 61 aa3.85□□□□□ -1.79
LINC00339-203ENST00000420503 LCE3CQ5T5A8 94 aa3.82□□□□□ -1.8
LINC00339-203ENST00000420503 KRTAP6-2Q3LI66 62 aa3.78□□□□□ -1.8
LINC00339-203ENST00000420503 OBSCNQ5VST9 7968 aa3.77□□□□□ -1.81
LINC00339-203ENST00000420503 PMAIP1Q13794 54 aa3.75□□□□□ -1.81
LINC00339-203ENST00000420503 KRTAP9-6A8MVA2 160 aa3.71□□□□□ -1.82
LINC00339-203ENST00000420503 PRO0628Q9UI54 55 aa3.67□□□□□ -1.82
LINC00339-203ENST00000420503 KRTAP5-1Q6L8H4 278 aa3.63□□□□□ -1.83
LINC00339-203ENST00000420503 PRAC1Q96KF2 57 aa3.58□□□□□ -1.84
LINC00339-203ENST00000420503 MT3P25713 68 aa3.49□□□□□ -1.85
LINC00339-203ENST00000420503 KTN1-AS1Q86SY8 53 aa3.46□□□□□ -1.86
LINC00339-203ENST00000420503 KRTAP4-4Q9BYR3 166 aa3.44□□□□□ -1.86
LINC00339-203ENST00000420503 LCE1EQ5T753 118 aa3.42□□□□□ -1.86
LINC00339-203ENST00000420503 LCE1BQ5T7P3 118 aa3.2□□□□□ -1.9
LINC00339-203ENST00000420503 NDUFAF8A1L188 74 aa3.1□□□□□ -1.91
LINC00339-203ENST00000420503 LCE1CQ5T751 118 aa3.04□□□□□ -1.92
LINC00339-203ENST00000420503 LUZP6Q538Z0 58 aa2.94□□□□□ -1.94
LINC00339-203ENST00000420503 LCE3DQ9BYE3 92 aa2.79□□□□□ -1.96
LINC00339-203ENST00000420503 LCE1FQ5T754 118 aa2.76□□□□□ -1.97
LINC00339-203ENST00000420503 PHGR1C9JFL3 82 aa2.72□□□□□ -1.97
LINC00339-203ENST00000420503 LCE3EQ5T5B0 92 aa2.66□□□□□ -1.98
LINC00339-203ENST00000420503 KRTAP21-2Q3LI59 83 aa2.57□□□□□ -2
LINC00339-203ENST00000420503 MUC19Q7Z5P9 8384 aa2.36□□□□□ -2.03
LINC00339-203ENST00000420503 INE1O15225 51 aa2.11□□□□□ -2.07
LINC00339-203ENST00000420503 PRM1P04553 51 aa2.11□□□□□ -2.07
LINC00339-203ENST00000420503 KRTAP21-1Q3LI58 79 aa2.01□□□□□ -2.09
LINC00339-203ENST00000420503 MUC16Q8WXI7 14507 aa1.63□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 274.1 ms