RNA–Protein interactions for RNA: ENST00000418988.2

PSMA1-202, Transcript of proteasome subunit alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PSMA1, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA1-202ENST00000418988 MT1EP04732 61 aa5.2□□□□□ -1.58
PSMA1-202ENST00000418988 LCE5AQ5TCM9 118 aa5.16□□□□□ -1.58
PSMA1-202ENST00000418988 TNP1P09430 55 aa5.15□□□□□ -1.59
PSMA1-202ENST00000418988 KRTAP19-3Q7Z4W3 81 aa5.15□□□□□ -1.59
PSMA1-202ENST00000418988 KRTAP4-7Q9BYR0 210 aa5.14□□□□□ -1.59
PSMA1-202ENST00000418988 A6NED7 52 aa5.13□□□□□ -1.59
PSMA1-202ENST00000418988 LCE1DQ5T752 114 aa5.13□□□□□ -1.59
PSMA1-202ENST00000418988 C10orf95Q9H7T3 257 aa5.13□□□□□ -1.59
PSMA1-202ENST00000418988 KRTAP19-5Q3LI72 72 aa5.1□□□□□ -1.59
PSMA1-202ENST00000418988 BRK1Q8WUW1 75 aa5.08□□□□□ -1.6
PSMA1-202ENST00000418988 CDC42SE1Q9NRR8 79 aa5.08□□□□□ -1.6
PSMA1-202ENST00000418988 MIR22HGQ0VDD5 57 aa5.06□□□□□ -1.6
PSMA1-202ENST00000418988 LCE3AQ5TA76 89 aa5.06□□□□□ -1.6
PSMA1-202ENST00000418988 MT1GP13640 62 aa5.04□□□□□ -1.6
PSMA1-202ENST00000418988 PP632Q6XCG6 107 aa5.04□□□□□ -1.6
PSMA1-202ENST00000418988 HMCN1Q96RW7 5635 aa5.04□□□□□ -1.6
PSMA1-202ENST00000418988 MT4P47944 62 aa5.03□□□□□ -1.6
PSMA1-202ENST00000418988 PRO0628Q9UI54 55 aa5.01□□□□□ -1.61
PSMA1-202ENST00000418988 AHNAK2Q8IVF2 5795 aa5□□□□□ -1.61
PSMA1-202ENST00000418988 K7ERS5 55 aa5□□□□□ -1.61
PSMA1-202ENST00000418988 MT1LQ93083 61 aa4.99□□□□□ -1.61
PSMA1-202ENST00000418988 H3BS24 57 aa4.97□□□□□ -1.61
PSMA1-202ENST00000418988 KRTAP25-1Q3LHN0 102 aa4.94□□□□□ -1.62
PSMA1-202ENST00000418988 LCE4AQ5TA78 99 aa4.94□□□□□ -1.62
PSMA1-202ENST00000418988 MT1MQ8N339 61 aa4.94□□□□□ -1.62
PSMA1-202ENST00000418988 KRTAP4-2Q9BYR5 136 aa4.94□□□□□ -1.62
PSMA1-202ENST00000418988 KRTAP5-10Q6L8G5 202 aa4.91□□□□□ -1.62
PSMA1-202ENST00000418988 KRTAP12-3P60328 96 aa4.89□□□□□ -1.63
PSMA1-202ENST00000418988 KRTAP23-1A1A580 65 aa4.8□□□□□ -1.64
PSMA1-202ENST00000418988 KRTAP4-11Q9BYQ6 195 aa4.8□□□□□ -1.64
PSMA1-202ENST00000418988 PMAIP1Q13794 54 aa4.79□□□□□ -1.64
PSMA1-202ENST00000418988 KRTAP5-4Q6L8H1 288 aa4.78□□□□□ -1.64
PSMA1-202ENST00000418988 KRTAP4-3Q9BYR4 195 aa4.78□□□□□ -1.64
PSMA1-202ENST00000418988 KRTAP5-7Q6L8G8 165 aa4.76□□□□□ -1.65
PSMA1-202ENST00000418988 KRTAP19-4Q3LI73 84 aa4.73□□□□□ -1.65
PSMA1-202ENST00000418988 KRTAP5-3Q6L8H2 238 aa4.73□□□□□ -1.65
PSMA1-202ENST00000418988 KTN1-AS1Q86SY8 53 aa4.65□□□□□ -1.67
PSMA1-202ENST00000418988 SPRR5A0A1B0GTR4 108 aa4.64□□□□□ -1.67
PSMA1-202ENST00000418988 ROMO1P60602 79 aa4.64□□□□□ -1.67
PSMA1-202ENST00000418988 KRTAP15-1Q3LI76 137 aa4.6□□□□□ -1.67
PSMA1-202ENST00000418988 KRTAP20-2Q3LI61 65 aa4.57□□□□□ -1.68
PSMA1-202ENST00000418988 KRTAP5-5Q701N2 237 aaPredicted RBP4.56□□□□□ -1.68
PSMA1-202ENST00000418988 LCE3CQ5T5A8 94 aa4.5□□□□□ -1.69
PSMA1-202ENST00000418988 PRAC1Q96KF2 57 aa4.5□□□□□ -1.69
PSMA1-202ENST00000418988 KRTAP12-4P60329 112 aa4.41□□□□□ -1.7
PSMA1-202ENST00000418988 SYNE1Q8NF91 8797 aaKnown RBP4.35□□□□□ -1.71
PSMA1-202ENST00000418988 MT1AP04731 61 aa4.26□□□□□ -1.73
PSMA1-202ENST00000418988 KRTAP9-6A8MVA2 160 aa4.22□□□□□ -1.73
PSMA1-202ENST00000418988 AHNAKQ09666 5890 aaKnown RBP4.19□□□□□ -1.74
PSMA1-202ENST00000418988 KRTAP6-1Q3LI64 71 aa4.18□□□□□ -1.74
PSMA1-202ENST00000418988 MUC5ACP98088 5654 aa4.16□□□□□ -1.74
PSMA1-202ENST00000418988 MUC5BQ9HC84 5762 aaPredicted RBP4.14□□□□□ -1.75
PSMA1-202ENST00000418988 KRTAP5-8O75690 187 aa4.14□□□□□ -1.75
PSMA1-202ENST00000418988 KRTAP5-2Q701N4 177 aa4.14□□□□□ -1.75
PSMA1-202ENST00000418988 A0A0A0MQY5 61 aa4.04□□□□□ -1.76
PSMA1-202ENST00000418988 OBSCNQ5VST9 7968 aa4□□□□□ -1.77
PSMA1-202ENST00000418988 KRTAP6-2Q3LI66 62 aa3.98□□□□□ -1.77
PSMA1-202ENST00000418988 MT3P25713 68 aa3.89□□□□□ -1.79
PSMA1-202ENST00000418988 KRTAP5-1Q6L8H4 278 aa3.78□□□□□ -1.8
PSMA1-202ENST00000418988 LUZP6Q538Z0 58 aa3.64□□□□□ -1.83
PSMA1-202ENST00000418988 LCE1EQ5T753 118 aa3.59□□□□□ -1.83
PSMA1-202ENST00000418988 NDUFAF8A1L188 74 aa3.57□□□□□ -1.84
PSMA1-202ENST00000418988 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.45□□□□□ -1.86
PSMA1-202ENST00000418988 LCE1BQ5T7P3 118 aa3.37□□□□□ -1.87
PSMA1-202ENST00000418988 LCE1CQ5T751 118 aa3.32□□□□□ -1.88
PSMA1-202ENST00000418988 LCE3DQ9BYE3 92 aa3.27□□□□□ -1.89
PSMA1-202ENST00000418988 KRTAP5-11Q6L8G4 156 aa3.26□□□□□ -1.89
PSMA1-202ENST00000418988 LCE3EQ5T5B0 92 aa3.09□□□□□ -1.91
PSMA1-202ENST00000418988 INE1O15225 51 aa2.98□□□□□ -1.93
PSMA1-202ENST00000418988 LCE1FQ5T754 118 aa2.92□□□□□ -1.94
PSMA1-202ENST00000418988 PHGR1C9JFL3 82 aa2.9□□□□□ -1.95
PSMA1-202ENST00000418988 KRTAP4-4Q9BYR3 166 aa2.86□□□□□ -1.95
PSMA1-202ENST00000418988 KRTAP21-2Q3LI59 83 aa2.77□□□□□ -1.97
PSMA1-202ENST00000418988 MUC19Q7Z5P9 8384 aa2.5□□□□□ -2.01
PSMA1-202ENST00000418988 PRM1P04553 51 aa2.41□□□□□ -2.02
PSMA1-202ENST00000418988 KRTAP21-1Q3LI58 79 aa2.17□□□□□ -2.06
PSMA1-202ENST00000418988 MUC16Q8WXI7 14507 aa1.75□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 7.2 ms