RNA–Protein interactions for RNA: ENST00000418288.5

RFC4-205, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-205ENST00000418288 WT1-ASQ06250 92 aa1.04□□□□□ -2.24
RFC4-205ENST00000418288 IGLV5-48A0A075B6I7 105 aa1.03□□□□□ -2.24
RFC4-205ENST00000418288 M0R2T5 61 aa1.03□□□□□ -2.24
RFC4-205ENST00000418288 KAAG1Q9UBP8 84 aa1.02□□□□□ -2.25
RFC4-205ENST00000418288 FLGP20930 4061 aaPredicted RBP1□□□□□ -2.25
RFC4-205ENST00000418288 POLR2KP53803 58 aaKnown RBP1□□□□□ -2.25
RFC4-205ENST00000418288 ARHGAP5-AS1Q96IT6 56 aa1□□□□□ -2.25
RFC4-205ENST00000418288 MMP24-AS1A0A0U1RRL7 71 aa0.99□□□□□ -2.25
RFC4-205ENST00000418288 RPL39P62891 51 aaKnown RBP0.99□□□□□ -2.25
RFC4-205ENST00000418288 S4R3F8 94 aa0.99□□□□□ -2.25
RFC4-205ENST00000418288 H3BUA1 57 aa0.98□□□□□ -2.25
RFC4-205ENST00000418288 MT4P47944 62 aa0.98□□□□□ -2.25
RFC4-205ENST00000418288 H3BSH0 61 aa0.97□□□□□ -2.25
RFC4-205ENST00000418288 DEFB131AP59861 70 aa0.97□□□□□ -2.25
RFC4-205ENST00000418288 SPINK6Q6UWN8 80 aa0.97□□□□□ -2.25
RFC4-205ENST00000418288 PRLHP81277 87 aa0.96□□□□□ -2.26
RFC4-205ENST00000418288 DEFB110Q30KQ9 67 aa0.96□□□□□ -2.26
RFC4-205ENST00000418288 RPL39LQ96EH5 51 aaKnown RBP0.96□□□□□ -2.26
RFC4-205ENST00000418288 SPRR2FQ96RM1 72 aa0.96□□□□□ -2.26
RFC4-205ENST00000418288 KRTAP19-2Q3LHN2 52 aa0.94□□□□□ -2.26
RFC4-205ENST00000418288 DEFB106AQ8N104 65 aa0.94□□□□□ -2.26
RFC4-205ENST00000418288 TTTY10Q9BZA0 68 aa0.94□□□□□ -2.26
RFC4-205ENST00000418288 COX14Q96I36 57 aa0.93□□□□□ -2.26
RFC4-205ENST00000418288 KRTAP21-2Q3LI59 83 aa0.92□□□□□ -2.26
RFC4-205ENST00000418288 LINC01590Q5TEZ4 76 aa0.92□□□□□ -2.26
RFC4-205ENST00000418288 H3BUX3 64 aa0.91□□□□□ -2.26
RFC4-205ENST00000418288 LEAP2Q969E1 77 aa0.91□□□□□ -2.26
RFC4-205ENST00000418288 KRTAP4-1Q9BYQ7 146 aa0.91□□□□□ -2.26
RFC4-205ENST00000418288 CLPSL2Q6UWE3 100 aa0.9□□□□□ -2.27
RFC4-205ENST00000418288 A8MTW9 85 aa0.87□□□□□ -2.27
RFC4-205ENST00000418288 M0QY20 66 aa0.87□□□□□ -2.27
RFC4-205ENST00000418288 NOP10Q9NPE3 64 aaKnown RBP0.87□□□□□ -2.27
RFC4-205ENST00000418288 DEFB136Q30KP8 78 aa0.86□□□□□ -2.27
RFC4-205ENST00000418288 SPINK1P00995 79 aa0.85□□□□□ -2.27
RFC4-205ENST00000418288 PRCDQ00LT1 54 aa0.84□□□□□ -2.27
RFC4-205ENST00000418288 DEFB135Q30KP9 77 aa0.84□□□□□ -2.27
RFC4-205ENST00000418288 MT2AP02795 61 aa0.83□□□□□ -2.28
RFC4-205ENST00000418288 SYNE1Q8NF91 8797 aaKnown RBP0.83□□□□□ -2.28
RFC4-205ENST00000418288 H0YGG7 62 aa0.82□□□□□ -2.28
RFC4-205ENST00000418288 TOMM7Q9P0U1 55 aa0.82□□□□□ -2.28
RFC4-205ENST00000418288 MT1FP04733 61 aa0.81□□□□□ -2.28
RFC4-205ENST00000418288 PHGR1C9JFL3 82 aa0.8□□□□□ -2.28
RFC4-205ENST00000418288 DEFB4AO15263 64 aa0.8□□□□□ -2.28
RFC4-205ENST00000418288 M0QZ58 72 aa0.77□□□□□ -2.29
RFC4-205ENST00000418288 KRTAP20-2Q3LI61 65 aa0.77□□□□□ -2.29
RFC4-205ENST00000418288 KRTAP8-1Q8IUC2 63 aa0.77□□□□□ -2.29
RFC4-205ENST00000418288 PRM1P04553 51 aa0.76□□□□□ -2.29
RFC4-205ENST00000418288 K7EIM0 57 aa0.75□□□□□ -2.29
RFC4-205ENST00000418288 KRTAP21-1Q3LI58 79 aa0.73□□□□□ -2.29
RFC4-205ENST00000418288 TMEM167AQ8TBQ9 72 aa0.72□□□□□ -2.29
RFC4-205ENST00000418288 SPART-AS1P0CW21 52 aa0.7□□□□□ -2.3
RFC4-205ENST00000418288 C9orf92A6NGG3 77 aa0.69□□□□□ -2.3
RFC4-205ENST00000418288 TNP1P09430 55 aa0.69□□□□□ -2.3
RFC4-205ENST00000418288 HTN3P15516 51 aa0.69□□□□□ -2.3
RFC4-205ENST00000418288 RPL39P5Q59GN2 51 aa0.67□□□□□ -2.3
RFC4-205ENST00000418288 H3BNG1 76 aa0.66□□□□□ -2.3
RFC4-205ENST00000418288 MUC16Q8WXI7 14507 aa0.61□□□□□ -2.31
RFC4-205ENST00000418288 MT1BP07438 61 aa0.58□□□□□ -2.32
RFC4-205ENST00000418288 A0A096LPF7 62 aa0.54□□□□□ -2.32
RFC4-205ENST00000418288 APELAP0DMC3 54 aa0.53□□□□□ -2.32
RFC4-205ENST00000418288 RHPN1-AS1Q9BWJ2 59 aa0.53□□□□□ -2.32
RFC4-205ENST00000418288 DEFB1P60022 68 aa0.52□□□□□ -2.33
RFC4-205ENST00000418288 A0A096LNI7 61 aa0.51□□□□□ -2.33
RFC4-205ENST00000418288 MT1AP04731 61 aa0.51□□□□□ -2.33
RFC4-205ENST00000418288 KRTAP6-2Q3LI66 62 aa0.51□□□□□ -2.33
RFC4-205ENST00000418288 KRTAP19-8Q3LI54 63 aa0.5□□□□□ -2.33
RFC4-205ENST00000418288 LINC01556Q5JQF7 62 aa0.5□□□□□ -2.33
RFC4-205ENST00000418288 KRTAP19-5Q3LI72 72 aa0.49□□□□□ -2.33
RFC4-205ENST00000418288 MT1GP13640 62 aa0.48□□□□□ -2.33
RFC4-205ENST00000418288 HTN1P15515 57 aa0.46□□□□□ -2.34
RFC4-205ENST00000418288 RPS29P62273 56 aaKnown RBP0.42□□□□□ -2.34
RFC4-205ENST00000418288 MT1MQ8N339 61 aa0.42□□□□□ -2.34
RFC4-205ENST00000418288 SPRR2GQ9BYE4 73 aa0.41□□□□□ -2.34
RFC4-205ENST00000418288 MT1EP04732 61 aa0.39□□□□□ -2.35
RFC4-205ENST00000418288 MT1XP80297 61 aa0.39□□□□□ -2.35
RFC4-205ENST00000418288 KRTAP19-7Q3SYF9 63 aa0.36□□□□□ -2.35
RFC4-205ENST00000418288 MT1LQ93083 61 aa0.26□□□□□ -2.37
RFC4-205ENST00000418288 KRTAP6-1Q3LI64 71 aa0.25□□□□□ -2.37
Retrieved 78 of 20,778 RNA–protein pairs in 164.9 ms