RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 SPRR2DP22532 72 aa8.14□□□□□ -1.11
PTPRU-203ENST00000415600 KRTAP2-2Q9BYT5 123 aa8.12□□□□□ -1.11
PTPRU-203ENST00000415600 KRTAP2-1Q9BYU5 128 aa8.12□□□□□ -1.11
PTPRU-203ENST00000415600 TNP1P09430 55 aa7.99□□□□□ -1.13
PTPRU-203ENST00000415600 LCE3BQ5TA77 95 aa7.92□□□□□ -1.14
PTPRU-203ENST00000415600 PP632Q6XCG6 107 aa7.84□□□□□ -1.15
PTPRU-203ENST00000415600 KRTAP23-1A1A580 65 aa7.82□□□□□ -1.16
PTPRU-203ENST00000415600 KRTAP19-7Q3SYF9 63 aa7.63□□□□□ -1.19
PTPRU-203ENST00000415600 LCE3AQ5TA76 89 aa7.63□□□□□ -1.19
PTPRU-203ENST00000415600 MT1EP04732 61 aa7.61□□□□□ -1.19
PTPRU-203ENST00000415600 LCE5AQ5TCM9 118 aa7.61□□□□□ -1.19
PTPRU-203ENST00000415600 KRTAP19-3Q7Z4W3 81 aa7.6□□□□□ -1.19
PTPRU-203ENST00000415600 DSTQ03001 7570 aaKnown RBP7.49□□□□□ -1.21
PTPRU-203ENST00000415600 MT1GP13640 62 aa7.44□□□□□ -1.22
PTPRU-203ENST00000415600 KRTAP19-5Q3LI72 72 aa7.44□□□□□ -1.22
PTPRU-203ENST00000415600 KRTAP4-9Q9BYQ8 210 aa7.33□□□□□ -1.24
PTPRU-203ENST00000415600 KRTAP12-3P60328 96 aa7.31□□□□□ -1.24
PTPRU-203ENST00000415600 GPR98Q8WXG9 6306 aa7.31□□□□□ -1.24
PTPRU-203ENST00000415600 KRTAP15-1Q3LI76 137 aa7.27□□□□□ -1.25
PTPRU-203ENST00000415600 MT1MQ8N339 61 aa7.25□□□□□ -1.25
PTPRU-203ENST00000415600 MT1LQ93083 61 aa7.25□□□□□ -1.25
PTPRU-203ENST00000415600 LCE4AQ5TA78 99 aa7.2□□□□□ -1.26
PTPRU-203ENST00000415600 LCE1DQ5T752 114 aa7.16□□□□□ -1.26
PTPRU-203ENST00000415600 MT4P47944 62 aa7.09□□□□□ -1.27
PTPRU-203ENST00000415600 HMCN1Q96RW7 5635 aa7.03□□□□□ -1.28
PTPRU-203ENST00000415600 SPRR5A0A1B0GTR4 108 aa7.01□□□□□ -1.29
PTPRU-203ENST00000415600 KRTAP4-3Q9BYR4 195 aa7□□□□□ -1.29
PTPRU-203ENST00000415600 KRTAP5-4Q6L8H1 288 aa6.97□□□□□ -1.29
PTPRU-203ENST00000415600 KRTAP19-4Q3LI73 84 aa6.88□□□□□ -1.31
PTPRU-203ENST00000415600 LCE3CQ5T5A8 94 aa6.85□□□□□ -1.31
PTPRU-203ENST00000415600 KRTAP4-6Q9BYQ5 205 aa6.82□□□□□ -1.32
PTPRU-203ENST00000415600 AHNAK2Q8IVF2 5795 aa6.82□□□□□ -1.32
PTPRU-203ENST00000415600 KRTAP4-7Q9BYR0 210 aa6.8□□□□□ -1.32
PTPRU-203ENST00000415600 LUZP6Q538Z0 58 aa6.79□□□□□ -1.32
PTPRU-203ENST00000415600 NDUFAF8A1L188 74 aa6.72□□□□□ -1.33
PTPRU-203ENST00000415600 KRTAP5-10Q6L8G5 202 aa6.71□□□□□ -1.34
PTPRU-203ENST00000415600 KRTAP12-4P60329 112 aa6.63□□□□□ -1.35
PTPRU-203ENST00000415600 KRTAP5-5Q701N2 237 aaPredicted RBP6.62□□□□□ -1.35
PTPRU-203ENST00000415600 KRTAP20-2Q3LI61 65 aa6.6□□□□□ -1.35
PTPRU-203ENST00000415600 KRTAP5-3Q6L8H2 238 aa6.54□□□□□ -1.36
PTPRU-203ENST00000415600 KRTAP5-7Q6L8G8 165 aa6.5□□□□□ -1.37
PTPRU-203ENST00000415600 KRTAP9-6A8MVA2 160 aa6.48□□□□□ -1.37
PTPRU-203ENST00000415600 LOC100996750A0A140TA64 210 aa6.46□□□□□ -1.38
PTPRU-203ENST00000415600 SYNE1Q8NF91 8797 aaKnown RBP6.37□□□□□ -1.39
PTPRU-203ENST00000415600 MT1AP04731 61 aa6.18□□□□□ -1.42
PTPRU-203ENST00000415600 H3BS24 57 aa6.13□□□□□ -1.43
PTPRU-203ENST00000415600 KRTAP6-1Q3LI64 71 aa6.1□□□□□ -1.43
PTPRU-203ENST00000415600 KRTAP5-2Q701N4 177 aa6.08□□□□□ -1.44
PTPRU-203ENST00000415600 KRTAP4-11Q9BYQ6 195 aa6.08□□□□□ -1.44
PTPRU-203ENST00000415600 KRTAP9-4Q9BYQ2 154 aa5.98□□□□□ -1.45
PTPRU-203ENST00000415600 A0A0A0MQY5 61 aa5.94□□□□□ -1.46
PTPRU-203ENST00000415600 KRTAP6-2Q3LI66 62 aa5.89□□□□□ -1.47
PTPRU-203ENST00000415600 KRTAP5-8O75690 187 aa5.83□□□□□ -1.48
PTPRU-203ENST00000415600 MT3P25713 68 aa5.72□□□□□ -1.49
PTPRU-203ENST00000415600 AHNAKQ09666 5890 aaKnown RBP5.68□□□□□ -1.5
PTPRU-203ENST00000415600 OBSCNQ5VST9 7968 aa5.66□□□□□ -1.5
PTPRU-203ENST00000415600 KRTAP9-9Q9BYP9 154 aa5.66□□□□□ -1.5
PTPRU-203ENST00000415600 MUC5BQ9HC84 5762 aaPredicted RBP5.65□□□□□ -1.5
PTPRU-203ENST00000415600 MUC5ACP98088 5654 aa5.65□□□□□ -1.5
PTPRU-203ENST00000415600 INE1O15225 51 aa5.58□□□□□ -1.52
PTPRU-203ENST00000415600 KRTAP5-1Q6L8H4 278 aa5.46□□□□□ -1.54
PTPRU-203ENST00000415600 LCE1EQ5T753 118 aa5.27□□□□□ -1.57
PTPRU-203ENST00000415600 LCE3DQ9BYE3 92 aa5.16□□□□□ -1.58
PTPRU-203ENST00000415600 LCE3EQ5T5B0 92 aa5.04□□□□□ -1.6
PTPRU-203ENST00000415600 LCE1BQ5T7P3 118 aa4.95□□□□□ -1.62
PTPRU-203ENST00000415600 KRTAP4-2Q9BYR5 136 aa4.9□□□□□ -1.63
PTPRU-203ENST00000415600 LCE1CQ5T751 118 aa4.87□□□□□ -1.63
PTPRU-203ENST00000415600 KRTAP4-12Q9BQ66 201 aa4.48□□□□□ -1.69
PTPRU-203ENST00000415600 PRM1P04553 51 aa4.44□□□□□ -1.7
PTPRU-203ENST00000415600 KRTAP5-11Q6L8G4 156 aa4.42□□□□□ -1.7
PTPRU-203ENST00000415600 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.4□□□□□ -1.7
PTPRU-203ENST00000415600 LCE1FQ5T754 118 aa4.38□□□□□ -1.71
PTPRU-203ENST00000415600 KRTAP21-2Q3LI59 83 aa4.02□□□□□ -1.77
PTPRU-203ENST00000415600 PHGR1C9JFL3 82 aa3.96□□□□□ -1.78
PTPRU-203ENST00000415600 KRTAP4-4Q9BYR3 166 aa3.68□□□□□ -1.82
PTPRU-203ENST00000415600 MUC19Q7Z5P9 8384 aa3.52□□□□□ -1.85
PTPRU-203ENST00000415600 KRTAP21-1Q3LI58 79 aa3.04□□□□□ -1.92
PTPRU-203ENST00000415600 MUC16Q8WXI7 14507 aa2.5□□□□□ -2.01
Retrieved 78 of 20,778 RNA–protein pairs in 9.2 ms