RNA–Protein interactions for RNA: ENST00000414802.5

CNOT4-204, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 1,687 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-204ENST00000414802 ROMO1P60602 79 aa5.06□□□□□ -1.6
CNOT4-204ENST00000414802 MUC12Q9UKN1 5478 aa5.04□□□□□ -1.6
CNOT4-204ENST00000414802 KRTAP6-3Q3LI67 103 aa5.04□□□□□ -1.6
CNOT4-204ENST00000414802 KRTAP25-1Q3LHN0 102 aa5.02□□□□□ -1.61
CNOT4-204ENST00000414802 LCE3AQ5TA76 89 aa5□□□□□ -1.61
CNOT4-204ENST00000414802 KRTAP5-9P26371 169 aa4.98□□□□□ -1.61
CNOT4-204ENST00000414802 SPRR2FQ96RM1 72 aa4.98□□□□□ -1.61
CNOT4-204ENST00000414802 MDN1Q9NU22 5596 aa4.95□□□□□ -1.62
CNOT4-204ENST00000414802 PRAC1Q96KF2 57 aa4.93□□□□□ -1.62
CNOT4-204ENST00000414802 KRTAP19-5Q3LI72 72 aa4.9□□□□□ -1.62
CNOT4-204ENST00000414802 KRTAP19-7Q3SYF9 63 aa4.9□□□□□ -1.62
CNOT4-204ENST00000414802 NEBP20929 6669 aa4.88□□□□□ -1.63
CNOT4-204ENST00000414802 MT1EP04732 61 aa4.84□□□□□ -1.63
CNOT4-204ENST00000414802 SPRR2EP22531 72 aa4.8□□□□□ -1.64
CNOT4-204ENST00000414802 SPRR2BP35325 72 aa4.8□□□□□ -1.64
CNOT4-204ENST00000414802 SPRR2AP35326 72 aa4.8□□□□□ -1.64
CNOT4-204ENST00000414802 KRTAP23-1A1A580 65 aa4.8□□□□□ -1.64
CNOT4-204ENST00000414802 KRTAP12-3P60328 96 aa4.78□□□□□ -1.64
CNOT4-204ENST00000414802 LCE1AQ5T7P2 110 aa4.77□□□□□ -1.65
CNOT4-204ENST00000414802 PP632Q6XCG6 107 aa4.74□□□□□ -1.65
CNOT4-204ENST00000414802 KRTAP15-1Q3LI76 137 aa4.71□□□□□ -1.66
CNOT4-204ENST00000414802 KRTAP19-3Q7Z4W3 81 aa4.7□□□□□ -1.66
CNOT4-204ENST00000414802 MT1LQ93083 61 aa4.7□□□□□ -1.66
CNOT4-204ENST00000414802 SPRR2DP22532 72 aa4.64□□□□□ -1.67
CNOT4-204ENST00000414802 MT1GP13640 62 aa4.6□□□□□ -1.67
CNOT4-204ENST00000414802 MT1MQ8N339 61 aa4.58□□□□□ -1.68
CNOT4-204ENST00000414802 DSTQ03001 7570 aaKnown RBP4.52□□□□□ -1.69
CNOT4-204ENST00000414802 KRTAP4-3Q9BYR4 195 aa4.51□□□□□ -1.69
CNOT4-204ENST00000414802 KRTAP20-1Q3LI63 56 aa4.5□□□□□ -1.69
CNOT4-204ENST00000414802 KRTAP2-3P0C7H8 128 aa4.46□□□□□ -1.7
CNOT4-204ENST00000414802 KRTAP2-4Q9BYR9 128 aa4.46□□□□□ -1.7
CNOT4-204ENST00000414802 LCE3CQ5T5A8 94 aa4.44□□□□□ -1.7
CNOT4-204ENST00000414802 KRTAP2-2Q9BYT5 123 aa4.34□□□□□ -1.71
CNOT4-204ENST00000414802 KRTAP2-1Q9BYU5 128 aa4.34□□□□□ -1.71
CNOT4-204ENST00000414802 KRTAP9-6A8MVA2 160 aa4.22□□□□□ -1.73
CNOT4-204ENST00000414802 SPRR5A0A1B0GTR4 108 aa4.15□□□□□ -1.75
CNOT4-204ENST00000414802 LUZP6Q538Z0 58 aa4.15□□□□□ -1.75
CNOT4-204ENST00000414802 KRTAP5-5Q701N2 237 aaPredicted RBP4.14□□□□□ -1.75
CNOT4-204ENST00000414802 KRTAP5-4Q6L8H1 288 aa4.09□□□□□ -1.76
CNOT4-204ENST00000414802 MT4P47944 62 aa4.05□□□□□ -1.76
CNOT4-204ENST00000414802 HMCN1Q96RW7 5635 aa4.04□□□□□ -1.76
CNOT4-204ENST00000414802 SYNE1Q8NF91 8797 aaKnown RBP4.03□□□□□ -1.76
CNOT4-204ENST00000414802 NDUFAF8A1L188 74 aa4.02□□□□□ -1.77
CNOT4-204ENST00000414802 MT1AP04731 61 aa3.99□□□□□ -1.77
CNOT4-204ENST00000414802 KRTAP6-1Q3LI64 71 aa3.97□□□□□ -1.77
CNOT4-204ENST00000414802 KRTAP12-4P60329 112 aa3.9□□□□□ -1.78
CNOT4-204ENST00000414802 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.87□□□□□ -1.79
CNOT4-204ENST00000414802 KRTAP20-2Q3LI61 65 aa3.86□□□□□ -1.79
CNOT4-204ENST00000414802 KRTAP5-11Q6L8G4 156 aa3.82□□□□□ -1.8
CNOT4-204ENST00000414802 AHNAK2Q8IVF2 5795 aa3.8□□□□□ -1.8
CNOT4-204ENST00000414802 LCE1EQ5T753 118 aa3.75□□□□□ -1.81
CNOT4-204ENST00000414802 KRTAP6-2Q3LI66 62 aa3.71□□□□□ -1.82
CNOT4-204ENST00000414802 A0A0A0MQY5 61 aa3.68□□□□□ -1.82
CNOT4-204ENST00000414802 KRTAP5-2Q701N4 177 aa3.66□□□□□ -1.82
CNOT4-204ENST00000414802 GPR98Q8WXG9 6306 aa3.66□□□□□ -1.82
CNOT4-204ENST00000414802 MT3P25713 68 aa3.65□□□□□ -1.82
CNOT4-204ENST00000414802 KRTAP5-10Q6L8G5 202 aa3.49□□□□□ -1.85
CNOT4-204ENST00000414802 INE1O15225 51 aa3.44□□□□□ -1.86
CNOT4-204ENST00000414802 OBSCNQ5VST9 7968 aa3.43□□□□□ -1.86
CNOT4-204ENST00000414802 KRTAP5-1Q6L8H4 278 aa3.33□□□□□ -1.88
CNOT4-204ENST00000414802 KRTAP5-8O75690 187 aa3.29□□□□□ -1.88
CNOT4-204ENST00000414802 KRTAP5-7Q6L8G8 165 aa3.28□□□□□ -1.88
CNOT4-204ENST00000414802 MUC5ACP98088 5654 aa3.28□□□□□ -1.88
CNOT4-204ENST00000414802 LCE3DQ9BYE3 92 aa3.27□□□□□ -1.89
CNOT4-204ENST00000414802 KRTAP4-4Q9BYR3 166 aa3.19□□□□□ -1.9
CNOT4-204ENST00000414802 LCE1FQ5T754 118 aa3.16□□□□□ -1.9
CNOT4-204ENST00000414802 LCE3EQ5T5B0 92 aa3.14□□□□□ -1.91
CNOT4-204ENST00000414802 MUC5BQ9HC84 5762 aaPredicted RBP3.06□□□□□ -1.92
CNOT4-204ENST00000414802 LCE1BQ5T7P3 118 aa3.04□□□□□ -1.92
CNOT4-204ENST00000414802 AHNAKQ09666 5890 aaKnown RBP3.02□□□□□ -1.93
CNOT4-204ENST00000414802 LCE1CQ5T751 118 aa2.96□□□□□ -1.94
CNOT4-204ENST00000414802 PRM1P04553 51 aa2.63□□□□□ -1.99
CNOT4-204ENST00000414802 KRTAP21-2Q3LI59 83 aa2.59□□□□□ -2
CNOT4-204ENST00000414802 PHGR1C9JFL3 82 aa2.28□□□□□ -2.04
CNOT4-204ENST00000414802 MUC19Q7Z5P9 8384 aa2.11□□□□□ -2.07
CNOT4-204ENST00000414802 KRTAP21-1Q3LI58 79 aa1.64□□□□□ -2.15
CNOT4-204ENST00000414802 MUC16Q8WXI7 14507 aa1.47□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 10.3 ms