RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 KRTAP5-10Q6L8G5 202 aa5.44□□□□□ -1.54
RAPGEF1-204ENST00000414781 LCE1DQ5T752 114 aa5.43□□□□□ -1.54
RAPGEF1-204ENST00000414781 KRTAP5-7Q6L8G8 165 aa5.35□□□□□ -1.55
RAPGEF1-204ENST00000414781 C10orf95Q9H7T3 257 aa5.31□□□□□ -1.56
RAPGEF1-204ENST00000414781 TNP1P09430 55 aa5.29□□□□□ -1.56
RAPGEF1-204ENST00000414781 KRTAP10-12P60413 245 aa5.27□□□□□ -1.57
RAPGEF1-204ENST00000414781 LCE4AQ5TA78 99 aa5.27□□□□□ -1.57
RAPGEF1-204ENST00000414781 MT4P47944 62 aa5.26□□□□□ -1.57
RAPGEF1-204ENST00000414781 ROMO1P60602 79 aa5.26□□□□□ -1.57
RAPGEF1-204ENST00000414781 KRTAP10-7P60409 375 aaPredicted RBP5.25□□□□□ -1.57
RAPGEF1-204ENST00000414781 PRO0628Q9UI54 55 aa5.24□□□□□ -1.57
RAPGEF1-204ENST00000414781 KRTAP25-1Q3LHN0 102 aa5.23□□□□□ -1.57
RAPGEF1-204ENST00000414781 LCE5AQ5TCM9 118 aa5.21□□□□□ -1.58
RAPGEF1-204ENST00000414781 PMAIP1Q13794 54 aa5.2□□□□□ -1.58
RAPGEF1-204ENST00000414781 SPRR5A0A1B0GTR4 108 aa5.18□□□□□ -1.58
RAPGEF1-204ENST00000414781 KRTAP5-3Q6L8H2 238 aa5.13□□□□□ -1.59
RAPGEF1-204ENST00000414781 KRTAP19-3Q7Z4W3 81 aa5.1□□□□□ -1.59
RAPGEF1-204ENST00000414781 KRTAP23-1A1A580 65 aa5.08□□□□□ -1.6
RAPGEF1-204ENST00000414781 PP632Q6XCG6 107 aa5.03□□□□□ -1.6
RAPGEF1-204ENST00000414781 LCE3AQ5TA76 89 aa5.01□□□□□ -1.61
RAPGEF1-204ENST00000414781 KRTAP5-4Q6L8H1 288 aa5.01□□□□□ -1.61
RAPGEF1-204ENST00000414781 KRTAP4-6Q9BYQ5 205 aa5.01□□□□□ -1.61
RAPGEF1-204ENST00000414781 MT1EP04732 61 aa4.97□□□□□ -1.61
RAPGEF1-204ENST00000414781 KRTAP19-7Q3SYF9 63 aa4.96□□□□□ -1.62
RAPGEF1-204ENST00000414781 AHNAKQ09666 5890 aaKnown RBP4.92□□□□□ -1.62
RAPGEF1-204ENST00000414781 H3BS24 57 aa4.9□□□□□ -1.63
RAPGEF1-204ENST00000414781 MT1GP13640 62 aa4.9□□□□□ -1.63
RAPGEF1-204ENST00000414781 KRTAP19-5Q3LI72 72 aa4.89□□□□□ -1.63
RAPGEF1-204ENST00000414781 LOC100996750A0A140TA64 210 aa4.88□□□□□ -1.63
RAPGEF1-204ENST00000414781 KTN1-AS1Q86SY8 53 aa4.88□□□□□ -1.63
RAPGEF1-204ENST00000414781 KRTAP12-3P60328 96 aa4.87□□□□□ -1.63
RAPGEF1-204ENST00000414781 MT1MQ8N339 61 aa4.79□□□□□ -1.64
RAPGEF1-204ENST00000414781 PRAC1Q96KF2 57 aa4.78□□□□□ -1.64
RAPGEF1-204ENST00000414781 KRTAP20-2Q3LI61 65 aa4.77□□□□□ -1.65
RAPGEF1-204ENST00000414781 MUC5ACP98088 5654 aa4.74□□□□□ -1.65
RAPGEF1-204ENST00000414781 KRTAP19-4Q3LI73 84 aa4.73□□□□□ -1.65
RAPGEF1-204ENST00000414781 KRTAP15-1Q3LI76 137 aa4.72□□□□□ -1.65
RAPGEF1-204ENST00000414781 MT1LQ93083 61 aa4.69□□□□□ -1.66
RAPGEF1-204ENST00000414781 MUC5BQ9HC84 5762 aaPredicted RBP4.68□□□□□ -1.66
RAPGEF1-204ENST00000414781 KRTAP4-3Q9BYR4 195 aa4.63□□□□□ -1.67
RAPGEF1-204ENST00000414781 KRTAP12-4P60329 112 aa4.58□□□□□ -1.68
RAPGEF1-204ENST00000414781 KRTAP4-11Q9BYQ6 195 aa4.55□□□□□ -1.68
RAPGEF1-204ENST00000414781 LCE3CQ5T5A8 94 aa4.53□□□□□ -1.68
RAPGEF1-204ENST00000414781 KRTAP5-5Q701N2 237 aaPredicted RBP4.46□□□□□ -1.7
RAPGEF1-204ENST00000414781 KRTAP4-12Q9BQ66 201 aa4.46□□□□□ -1.7
RAPGEF1-204ENST00000414781 KRTAP5-8O75690 187 aa4.44□□□□□ -1.7
RAPGEF1-204ENST00000414781 KRTAP4-7Q9BYR0 210 aa4.44□□□□□ -1.7
RAPGEF1-204ENST00000414781 SYNE1Q8NF91 8797 aaKnown RBP4.39□□□□□ -1.71
RAPGEF1-204ENST00000414781 KRTAP9-9Q9BYP9 154 aa4.34□□□□□ -1.71
RAPGEF1-204ENST00000414781 KRTAP5-2Q701N4 177 aa4.26□□□□□ -1.73
RAPGEF1-204ENST00000414781 KRTAP9-4Q9BYQ2 154 aa4.25□□□□□ -1.73
RAPGEF1-204ENST00000414781 KRTAP9-6A8MVA2 160 aa4.17□□□□□ -1.74
RAPGEF1-204ENST00000414781 OBSCNQ5VST9 7968 aa4.12□□□□□ -1.75
RAPGEF1-204ENST00000414781 LUZP6Q538Z0 58 aa4.11□□□□□ -1.75
RAPGEF1-204ENST00000414781 MT1AP04731 61 aa4.01□□□□□ -1.77
RAPGEF1-204ENST00000414781 KRTAP5-1Q6L8H4 278 aa3.94□□□□□ -1.78
RAPGEF1-204ENST00000414781 A0A0A0MQY5 61 aa3.93□□□□□ -1.78
RAPGEF1-204ENST00000414781 KRTAP6-1Q3LI64 71 aa3.92□□□□□ -1.78
RAPGEF1-204ENST00000414781 KRTAP6-2Q3LI66 62 aa3.91□□□□□ -1.78
RAPGEF1-204ENST00000414781 KRTAP4-2Q9BYR5 136 aa3.8□□□□□ -1.8
RAPGEF1-204ENST00000414781 NDUFAF8A1L188 74 aa3.71□□□□□ -1.82
RAPGEF1-204ENST00000414781 MT3P25713 68 aa3.69□□□□□ -1.82
RAPGEF1-204ENST00000414781 LCE1EQ5T753 118 aa3.55□□□□□ -1.84
RAPGEF1-204ENST00000414781 LCE3DQ9BYE3 92 aa3.38□□□□□ -1.87
RAPGEF1-204ENST00000414781 LCE1BQ5T7P3 118 aa3.36□□□□□ -1.87
RAPGEF1-204ENST00000414781 LCE1CQ5T751 118 aa3.28□□□□□ -1.88
RAPGEF1-204ENST00000414781 LCE3EQ5T5B0 92 aa3.26□□□□□ -1.89
RAPGEF1-204ENST00000414781 PHGR1C9JFL3 82 aa3.21□□□□□ -1.9
RAPGEF1-204ENST00000414781 KRTAP5-11Q6L8G4 156 aa3.21□□□□□ -1.9
RAPGEF1-204ENST00000414781 LCE1FQ5T754 118 aa3.17□□□□□ -1.9
RAPGEF1-204ENST00000414781 INE1O15225 51 aa3.15□□□□□ -1.91
RAPGEF1-204ENST00000414781 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.9□□□□□ -1.95
RAPGEF1-204ENST00000414781 PRM1P04553 51 aa2.68□□□□□ -1.98
RAPGEF1-204ENST00000414781 MUC19Q7Z5P9 8384 aa2.62□□□□□ -1.99
RAPGEF1-204ENST00000414781 KRTAP21-2Q3LI59 83 aa2.6□□□□□ -1.99
RAPGEF1-204ENST00000414781 KRTAP21-1Q3LI58 79 aa2.48□□□□□ -2.01
RAPGEF1-204ENST00000414781 KRTAP4-4Q9BYR3 166 aa2.45□□□□□ -2.02
RAPGEF1-204ENST00000414781 MUC16Q8WXI7 14507 aa1.8□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 99.8 ms