RNA–Protein interactions for RNA: ENST00000413517.1

HERPUD2-203, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 808 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-203ENST00000413517 MIR22HGQ0VDD5 57 aa3.57□□□□□ -1.84
HERPUD2-203ENST00000413517 R4GN34 69 aa3.57□□□□□ -1.84
HERPUD2-203ENST00000413517 PLAC4Q8WY50 150 aa3.53□□□□□ -1.84
HERPUD2-203ENST00000413517 KRTAP10-12P60413 245 aa3.5□□□□□ -1.85
HERPUD2-203ENST00000413517 PRO2289Q9P1D8 64 aa3.5□□□□□ -1.85
HERPUD2-203ENST00000413517 NEBP20929 6669 aa3.5□□□□□ -1.85
HERPUD2-203ENST00000413517 KMT2DO14686 5537 aa3.48□□□□□ -1.85
HERPUD2-203ENST00000413517 KRTAP12-2P59991 146 aa3.48□□□□□ -1.85
HERPUD2-203ENST00000413517 LCE3CQ5T5A8 94 aa3.46□□□□□ -1.86
HERPUD2-203ENST00000413517 SPRR2FQ96RM1 72 aa3.46□□□□□ -1.86
HERPUD2-203ENST00000413517 MUC12Q9UKN1 5478 aa3.45□□□□□ -1.86
HERPUD2-203ENST00000413517 KRTAP13-4Q3LI77 160 aa3.45□□□□□ -1.86
HERPUD2-203ENST00000413517 KRTAP10-7P60409 375 aaPredicted RBP3.44□□□□□ -1.86
HERPUD2-203ENST00000413517 KRTAP8-1Q8IUC2 63 aa3.43□□□□□ -1.86
HERPUD2-203ENST00000413517 KRTAP20-1Q3LI63 56 aa3.42□□□□□ -1.86
HERPUD2-203ENST00000413517 SPRR2EP22531 72 aa3.4□□□□□ -1.87
HERPUD2-203ENST00000413517 SPRR2BP35325 72 aa3.4□□□□□ -1.87
HERPUD2-203ENST00000413517 SPRR2AP35326 72 aa3.4□□□□□ -1.87
HERPUD2-203ENST00000413517 MDN1Q9NU22 5596 aa3.39□□□□□ -1.87
HERPUD2-203ENST00000413517 ROMO1P60602 79 aa3.37□□□□□ -1.87
HERPUD2-203ENST00000413517 KRTAP2-3P0C7H8 128 aa3.33□□□□□ -1.88
HERPUD2-203ENST00000413517 KRTAP2-4Q9BYR9 128 aa3.33□□□□□ -1.88
HERPUD2-203ENST00000413517 A0A0D9SG42 100 aa3.29□□□□□ -1.88
HERPUD2-203ENST00000413517 SPRR2DP22532 72 aa3.28□□□□□ -1.88
HERPUD2-203ENST00000413517 KRTAP12-1P59990 96 aa3.25□□□□□ -1.89
HERPUD2-203ENST00000413517 KRTAP19-7Q3SYF9 63 aa3.23□□□□□ -1.89
HERPUD2-203ENST00000413517 KRTAP2-1Q9BYU5 128 aa3.22□□□□□ -1.89
HERPUD2-203ENST00000413517 KRTAP5-11Q6L8G4 156 aa3.21□□□□□ -1.9
HERPUD2-203ENST00000413517 MT1EP04732 61 aa3.19□□□□□ -1.9
HERPUD2-203ENST00000413517 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.17□□□□□ -1.9
HERPUD2-203ENST00000413517 LCE3EQ5T5B0 92 aa3.16□□□□□ -1.9
HERPUD2-203ENST00000413517 SPRR5A0A1B0GTR4 108 aa3.14□□□□□ -1.91
HERPUD2-203ENST00000413517 KRTAP19-5Q3LI72 72 aa3.14□□□□□ -1.91
HERPUD2-203ENST00000413517 KRTAP19-3Q7Z4W3 81 aa3.14□□□□□ -1.91
HERPUD2-203ENST00000413517 LCE1EQ5T753 118 aa3.12□□□□□ -1.91
HERPUD2-203ENST00000413517 C10orf95Q9H7T3 257 aa3.12□□□□□ -1.91
HERPUD2-203ENST00000413517 LCE3AQ5TA76 89 aa3.08□□□□□ -1.92
HERPUD2-203ENST00000413517 MT1GP13640 62 aa3.05□□□□□ -1.92
HERPUD2-203ENST00000413517 MT1LQ93083 61 aa3.05□□□□□ -1.92
HERPUD2-203ENST00000413517 TNP1P09430 55 aa3.03□□□□□ -1.92
HERPUD2-203ENST00000413517 MT1MQ8N339 61 aa3.03□□□□□ -1.92
HERPUD2-203ENST00000413517 DSTQ03001 7570 aaKnown RBP3.02□□□□□ -1.93
HERPUD2-203ENST00000413517 KRTAP4-3Q9BYR4 195 aa3□□□□□ -1.93
HERPUD2-203ENST00000413517 PP632Q6XCG6 107 aa2.98□□□□□ -1.93
HERPUD2-203ENST00000413517 KRTAP12-3P60328 96 aa2.93□□□□□ -1.94
HERPUD2-203ENST00000413517 KRTAP5-4Q6L8H1 288 aa2.89□□□□□ -1.95
HERPUD2-203ENST00000413517 MT4P47944 62 aa2.88□□□□□ -1.95
HERPUD2-203ENST00000413517 HMCN1Q96RW7 5635 aa2.8□□□□□ -1.96
HERPUD2-203ENST00000413517 KRTAP5-5Q701N2 237 aaPredicted RBP2.79□□□□□ -1.96
HERPUD2-203ENST00000413517 LCE3DQ9BYE3 92 aa2.79□□□□□ -1.96
HERPUD2-203ENST00000413517 GPR98Q8WXG9 6306 aa2.79□□□□□ -1.96
HERPUD2-203ENST00000413517 KRTAP5-1Q6L8H4 278 aa2.78□□□□□ -1.96
HERPUD2-203ENST00000413517 KRTAP9-6A8MVA2 160 aa2.77□□□□□ -1.97
HERPUD2-203ENST00000413517 INE1O15225 51 aa2.75□□□□□ -1.97
HERPUD2-203ENST00000413517 KRTAP20-2Q3LI61 65 aa2.71□□□□□ -1.98
HERPUD2-203ENST00000413517 KRTAP5-10Q6L8G5 202 aa2.71□□□□□ -1.98
HERPUD2-203ENST00000413517 AHNAK2Q8IVF2 5795 aa2.7□□□□□ -1.98
HERPUD2-203ENST00000413517 KRTAP4-4Q9BYR3 166 aa2.66□□□□□ -1.98
HERPUD2-203ENST00000413517 SYNE1Q8NF91 8797 aaKnown RBP2.64□□□□□ -1.99
HERPUD2-203ENST00000413517 KRTAP12-4P60329 112 aa2.64□□□□□ -1.99
HERPUD2-203ENST00000413517 KRTAP6-1Q3LI64 71 aa2.6□□□□□ -1.99
HERPUD2-203ENST00000413517 MT1AP04731 61 aa2.59□□□□□ -1.99
HERPUD2-203ENST00000413517 KRTAP5-7Q6L8G8 165 aa2.59□□□□□ -1.99
HERPUD2-203ENST00000413517 KRTAP5-2Q701N4 177 aa2.54□□□□□ -2
HERPUD2-203ENST00000413517 KRTAP6-2Q3LI66 62 aa2.46□□□□□ -2.02
HERPUD2-203ENST00000413517 OBSCNQ5VST9 7968 aa2.45□□□□□ -2.02
HERPUD2-203ENST00000413517 KRTAP5-8O75690 187 aa2.4□□□□□ -2.03
HERPUD2-203ENST00000413517 MUC5ACP98088 5654 aa2.2□□□□□ -2.06
HERPUD2-203ENST00000413517 MUC5BQ9HC84 5762 aaPredicted RBP2.19□□□□□ -2.06
HERPUD2-203ENST00000413517 AHNAKQ09666 5890 aaKnown RBP2.14□□□□□ -2.07
HERPUD2-203ENST00000413517 LCE1CQ5T751 118 aa2.04□□□□□ -2.08
HERPUD2-203ENST00000413517 LCE1BQ5T7P3 118 aa2.04□□□□□ -2.08
HERPUD2-203ENST00000413517 PRM1P04553 51 aa1.71□□□□□ -2.14
HERPUD2-203ENST00000413517 KRTAP21-2Q3LI59 83 aa1.71□□□□□ -2.14
HERPUD2-203ENST00000413517 MUC19Q7Z5P9 8384 aa1.7□□□□□ -2.14
HERPUD2-203ENST00000413517 PHGR1C9JFL3 82 aa1.57□□□□□ -2.16
HERPUD2-203ENST00000413517 KRTAP21-1Q3LI58 79 aa1.16□□□□□ -2.22
HERPUD2-203ENST00000413517 MUC16Q8WXI7 14507 aa1□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 127.3 ms