RNA–Protein interactions for RNA: ENST00000413184.6

CPSF7-203, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-203ENST00000413184 LCE4AQ5TA78 99 aa3.21□□□□□ -1.9
CPSF7-203ENST00000413184 K7ERS5 55 aa3.2□□□□□ -1.9
CPSF7-203ENST00000413184 M0QZ58 72 aa3.16□□□□□ -1.9
CPSF7-203ENST00000413184 KRTAP12-1P59990 96 aa3.16□□□□□ -1.9
CPSF7-203ENST00000413184 KRTAP12-2P59991 146 aa3.15□□□□□ -1.91
CPSF7-203ENST00000413184 ROMO1P60602 79 aa3.13□□□□□ -1.91
CPSF7-203ENST00000413184 SPINT4Q6UDR6 99 aa3.12□□□□□ -1.91
CPSF7-203ENST00000413184 KRTAP4-7Q9BYR0 210 aa3.12□□□□□ -1.91
CPSF7-203ENST00000413184 KRTAP25-1Q3LHN0 102 aa3.1□□□□□ -1.91
CPSF7-203ENST00000413184 CRIPTQ9P021 101 aa3.1□□□□□ -1.91
CPSF7-203ENST00000413184 R4GN34 69 aa3.09□□□□□ -1.91
CPSF7-203ENST00000413184 LINC01554Q52M75 96 aa3.08□□□□□ -1.92
CPSF7-203ENST00000413184 KRTAP19-8Q3LI54 63 aa3.07□□□□□ -1.92
CPSF7-203ENST00000413184 KRTAP4-8Q9BYQ9 185 aa3.06□□□□□ -1.92
CPSF7-203ENST00000413184 KRTAP4-8A0A0G2JLE6 195 aa3.03□□□□□ -1.92
CPSF7-203ENST00000413184 C10orf95Q9H7T3 257 aa3.02□□□□□ -1.93
CPSF7-203ENST00000413184 KRTAP23-1A1A580 65 aa2.98□□□□□ -1.93
CPSF7-203ENST00000413184 KRTAP5-4Q6L8H1 288 aa2.96□□□□□ -1.94
CPSF7-203ENST00000413184 CAMK2N1Q7Z7J9 78 aa2.93□□□□□ -1.94
CPSF7-203ENST00000413184 SPRR2GQ9BYE4 73 aa2.92□□□□□ -1.94
CPSF7-203ENST00000413184 KRTAP5-8O75690 187 aa2.91□□□□□ -1.94
CPSF7-203ENST00000413184 PRO2289Q9P1D8 64 aa2.91□□□□□ -1.94
CPSF7-203ENST00000413184 KRTAP4-12Q9BQ66 201 aa2.9□□□□□ -1.95
CPSF7-203ENST00000413184 A0A0A0MQY5 61 aa2.87□□□□□ -1.95
CPSF7-203ENST00000413184 KRTAP20-2Q3LI61 65 aa2.87□□□□□ -1.95
CPSF7-203ENST00000413184 LCE5AQ5TCM9 118 aa2.87□□□□□ -1.95
CPSF7-203ENST00000413184 KRTAP4-11Q9BYQ6 195 aa2.87□□□□□ -1.95
CPSF7-203ENST00000413184 KRTAP9-9Q9BYP9 154 aa2.86□□□□□ -1.95
CPSF7-203ENST00000413184 KRTAP9-4Q9BYQ2 154 aa2.86□□□□□ -1.95
CPSF7-203ENST00000413184 PLAC4Q8WY50 150 aa2.85□□□□□ -1.95
CPSF7-203ENST00000413184 TNP1P09430 55 aa2.82□□□□□ -1.96
CPSF7-203ENST00000413184 KRTAP19-4Q3LI73 84 aa2.81□□□□□ -1.96
CPSF7-203ENST00000413184 MT1XP80297 61 aa2.8□□□□□ -1.96
CPSF7-203ENST00000413184 KRTAP15-1Q3LI76 137 aa2.8□□□□□ -1.96
CPSF7-203ENST00000413184 PP632Q6XCG6 107 aa2.8□□□□□ -1.96
CPSF7-203ENST00000413184 SYNE1Q8NF91 8797 aaKnown RBP2.77□□□□□ -1.97
CPSF7-203ENST00000413184 KRTAP19-3Q7Z4W3 81 aa2.75□□□□□ -1.97
CPSF7-203ENST00000413184 LCE3AQ5TA76 89 aa2.71□□□□□ -1.98
CPSF7-203ENST00000413184 KRTAP10-7P60409 375 aaPredicted RBP2.7□□□□□ -1.98
CPSF7-203ENST00000413184 KRTAP10-12P60413 245 aa2.69□□□□□ -1.98
CPSF7-203ENST00000413184 KRTAP5-2Q701N4 177 aa2.68□□□□□ -1.98
CPSF7-203ENST00000413184 NDUFAF8A1L188 74 aa2.65□□□□□ -1.99
CPSF7-203ENST00000413184 KRTAP4-2Q9BYR5 136 aa2.63□□□□□ -1.99
CPSF7-203ENST00000413184 KRTAP12-4P60329 112 aa2.61□□□□□ -1.99
CPSF7-203ENST00000413184 OBSCNQ5VST9 7968 aa2.58□□□□□ -2
CPSF7-203ENST00000413184 MT1GP13640 62 aa2.57□□□□□ -2
CPSF7-203ENST00000413184 KRTAP12-3P60328 96 aa2.57□□□□□ -2
CPSF7-203ENST00000413184 MT1EP04732 61 aa2.55□□□□□ -2
CPSF7-203ENST00000413184 LUZP6Q538Z0 58 aa2.54□□□□□ -2
CPSF7-203ENST00000413184 KRTAP19-5Q3LI72 72 aa2.52□□□□□ -2.01
CPSF7-203ENST00000413184 KRTAP19-7Q3SYF9 63 aa2.51□□□□□ -2.01
CPSF7-203ENST00000413184 MT1MQ8N339 61 aa2.51□□□□□ -2.01
CPSF7-203ENST00000413184 KRTAP4-3Q9BYR4 195 aa2.5□□□□□ -2.01
CPSF7-203ENST00000413184 LCE3CQ5T5A8 94 aa2.41□□□□□ -2.02
CPSF7-203ENST00000413184 MT1LQ93083 61 aa2.37□□□□□ -2.03
CPSF7-203ENST00000413184 KRTAP5-5Q701N2 237 aaPredicted RBP2.36□□□□□ -2.03
CPSF7-203ENST00000413184 KRTAP5-1Q6L8H4 278 aa2.34□□□□□ -2.03
CPSF7-203ENST00000413184 KRTAP9-6A8MVA2 160 aa2.32□□□□□ -2.04
CPSF7-203ENST00000413184 PHGR1C9JFL3 82 aa2.26□□□□□ -2.05
CPSF7-203ENST00000413184 INE1O15225 51 aa2.15□□□□□ -2.07
CPSF7-203ENST00000413184 KRTAP6-2Q3LI66 62 aa2.09□□□□□ -2.07
CPSF7-203ENST00000413184 MT3P25713 68 aa2.06□□□□□ -2.08
CPSF7-203ENST00000413184 MT1AP04731 61 aa2.01□□□□□ -2.09
CPSF7-203ENST00000413184 KRTAP6-1Q3LI64 71 aa2□□□□□ -2.09
CPSF7-203ENST00000413184 KRTAP5-11Q6L8G4 156 aa1.97□□□□□ -2.09
CPSF7-203ENST00000413184 LCE1BQ5T7P3 118 aa1.92□□□□□ -2.1
CPSF7-203ENST00000413184 LCE1EQ5T753 118 aa1.87□□□□□ -2.11
CPSF7-203ENST00000413184 LCE1FQ5T754 118 aa1.86□□□□□ -2.11
CPSF7-203ENST00000413184 LCE3DQ9BYE3 92 aa1.82□□□□□ -2.12
CPSF7-203ENST00000413184 LCE3EQ5T5B0 92 aa1.8□□□□□ -2.12
CPSF7-203ENST00000413184 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.8□□□□□ -2.12
CPSF7-203ENST00000413184 LCE1CQ5T751 118 aa1.76□□□□□ -2.13
CPSF7-203ENST00000413184 KRTAP21-1Q3LI58 79 aa1.72□□□□□ -2.13
CPSF7-203ENST00000413184 MUC19Q7Z5P9 8384 aa1.67□□□□□ -2.14
CPSF7-203ENST00000413184 PRM1P04553 51 aa1.66□□□□□ -2.14
CPSF7-203ENST00000413184 KRTAP4-4Q9BYR3 166 aa1.5□□□□□ -2.17
CPSF7-203ENST00000413184 KRTAP21-2Q3LI59 83 aa1.43□□□□□ -2.18
CPSF7-203ENST00000413184 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 11.1 ms