RNA–Protein interactions for RNA: ENST00000411731.6

ERBB3-202, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best) BASIC

Gene ERBB3, Length 1,027 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-202ENST00000411731 MT1LQ93083 61 aa5.3□□□□□ -1.56
ERBB3-202ENST00000411731 MT1GP13640 62 aa5.25□□□□□ -1.57
ERBB3-202ENST00000411731 KRTAP12-3P60328 96 aa5.25□□□□□ -1.57
ERBB3-202ENST00000411731 ROMO1P60602 79 aa5.24□□□□□ -1.57
ERBB3-202ENST00000411731 LCE3BQ5TA77 95 aa5.24□□□□□ -1.57
ERBB3-202ENST00000411731 MT1MQ8N339 61 aa5.21□□□□□ -1.58
ERBB3-202ENST00000411731 KRTAP2-2Q9BYT5 123 aa5.21□□□□□ -1.58
ERBB3-202ENST00000411731 KRTAP2-1Q9BYU5 128 aa5.21□□□□□ -1.58
ERBB3-202ENST00000411731 DSTQ03001 7570 aaKnown RBP5.2□□□□□ -1.58
ERBB3-202ENST00000411731 KRTAP23-1A1A580 65 aa5.2□□□□□ -1.58
ERBB3-202ENST00000411731 PP632Q6XCG6 107 aa5.13□□□□□ -1.59
ERBB3-202ENST00000411731 KRTAP4-3Q9BYR4 195 aa5.13□□□□□ -1.59
ERBB3-202ENST00000411731 KRTAP4-7Q9BYR0 210 aa5.11□□□□□ -1.59
ERBB3-202ENST00000411731 BRK1Q8WUW1 75 aa5.09□□□□□ -1.59
ERBB3-202ENST00000411731 KRTAP15-1Q3LI76 137 aa5□□□□□ -1.61
ERBB3-202ENST00000411731 KRTAP19-4Q3LI73 84 aa4.91□□□□□ -1.62
ERBB3-202ENST00000411731 LCE3CQ5T5A8 94 aa4.88□□□□□ -1.63
ERBB3-202ENST00000411731 GPR98Q8WXG9 6306 aa4.85□□□□□ -1.63
ERBB3-202ENST00000411731 KRTAP4-9Q9BYQ8 210 aa4.84□□□□□ -1.63
ERBB3-202ENST00000411731 LOC100996750A0A140TA64 210 aa4.82□□□□□ -1.64
ERBB3-202ENST00000411731 KRTAP5-4Q6L8H1 288 aa4.82□□□□□ -1.64
ERBB3-202ENST00000411731 SVIPQ8NHG7 77 aa4.82□□□□□ -1.64
ERBB3-202ENST00000411731 PMAIP1Q13794 54 aa4.79□□□□□ -1.64
ERBB3-202ENST00000411731 KRTAP5-5Q701N2 237 aaPredicted RBP4.79□□□□□ -1.64
ERBB3-202ENST00000411731 LCE4AQ5TA78 99 aa4.78□□□□□ -1.64
ERBB3-202ENST00000411731 LCE1DQ5T752 114 aa4.75□□□□□ -1.65
ERBB3-202ENST00000411731 HMCN1Q96RW7 5635 aa4.75□□□□□ -1.65
ERBB3-202ENST00000411731 MT4P47944 62 aa4.71□□□□□ -1.66
ERBB3-202ENST00000411731 KRTAP9-6A8MVA2 160 aa4.69□□□□□ -1.66
ERBB3-202ENST00000411731 KRTAP4-6Q9BYQ5 205 aa4.68□□□□□ -1.66
ERBB3-202ENST00000411731 PRO0628Q9UI54 55 aa4.67□□□□□ -1.66
ERBB3-202ENST00000411731 PRAC1Q96KF2 57 aa4.63□□□□□ -1.67
ERBB3-202ENST00000411731 SYNE1Q8NF91 8797 aaKnown RBP4.61□□□□□ -1.67
ERBB3-202ENST00000411731 KRTAP20-2Q3LI61 65 aa4.51□□□□□ -1.69
ERBB3-202ENST00000411731 MT1AP04731 61 aa4.49□□□□□ -1.69
ERBB3-202ENST00000411731 KRTAP6-1Q3LI64 71 aa4.49□□□□□ -1.69
ERBB3-202ENST00000411731 SPRR5A0A1B0GTR4 108 aa4.48□□□□□ -1.69
ERBB3-202ENST00000411731 AHNAK2Q8IVF2 5795 aa4.48□□□□□ -1.69
ERBB3-202ENST00000411731 KRTAP12-4P60329 112 aa4.47□□□□□ -1.69
ERBB3-202ENST00000411731 KTN1-AS1Q86SY8 53 aa4.41□□□□□ -1.7
ERBB3-202ENST00000411731 KRTAP5-3Q6L8H2 238 aa4.4□□□□□ -1.71
ERBB3-202ENST00000411731 H3BS24 57 aa4.35□□□□□ -1.71
ERBB3-202ENST00000411731 KRTAP9-4Q9BYQ2 154 aa4.33□□□□□ -1.72
ERBB3-202ENST00000411731 KRTAP5-10Q6L8G5 202 aa4.29□□□□□ -1.72
ERBB3-202ENST00000411731 KRTAP5-2Q701N4 177 aa4.28□□□□□ -1.72
ERBB3-202ENST00000411731 KRTAP6-2Q3LI66 62 aa4.21□□□□□ -1.74
ERBB3-202ENST00000411731 KRTAP5-7Q6L8G8 165 aa4.2□□□□□ -1.74
ERBB3-202ENST00000411731 MT3P25713 68 aa4.07□□□□□ -1.76
ERBB3-202ENST00000411731 KRTAP4-11Q9BYQ6 195 aa4.03□□□□□ -1.76
ERBB3-202ENST00000411731 OBSCNQ5VST9 7968 aa3.94□□□□□ -1.78
ERBB3-202ENST00000411731 KRTAP5-8O75690 187 aa3.93□□□□□ -1.78
ERBB3-202ENST00000411731 KRTAP5-1Q6L8H4 278 aa3.79□□□□□ -1.8
ERBB3-202ENST00000411731 A0A0A0MQY5 61 aa3.78□□□□□ -1.8
ERBB3-202ENST00000411731 MUC5ACP98088 5654 aa3.74□□□□□ -1.81
ERBB3-202ENST00000411731 AHNAKQ09666 5890 aaKnown RBP3.73□□□□□ -1.81
ERBB3-202ENST00000411731 LUZP6Q538Z0 58 aa3.71□□□□□ -1.82
ERBB3-202ENST00000411731 MUC5BQ9HC84 5762 aaPredicted RBP3.69□□□□□ -1.82
ERBB3-202ENST00000411731 LCE1EQ5T753 118 aa3.68□□□□□ -1.82
ERBB3-202ENST00000411731 KRTAP9-9Q9BYP9 154 aa3.58□□□□□ -1.84
ERBB3-202ENST00000411731 LCE3DQ9BYE3 92 aa3.55□□□□□ -1.84
ERBB3-202ENST00000411731 KRTAP4-2Q9BYR5 136 aa3.51□□□□□ -1.85
ERBB3-202ENST00000411731 LCE1CQ5T751 118 aa3.43□□□□□ -1.86
ERBB3-202ENST00000411731 LCE1BQ5T7P3 118 aa3.43□□□□□ -1.86
ERBB3-202ENST00000411731 LCE3EQ5T5B0 92 aa3.38□□□□□ -1.87
ERBB3-202ENST00000411731 NDUFAF8A1L188 74 aa3.32□□□□□ -1.88
ERBB3-202ENST00000411731 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.17□□□□□ -1.9
ERBB3-202ENST00000411731 KRTAP5-11Q6L8G4 156 aa3.07□□□□□ -1.92
ERBB3-202ENST00000411731 KRTAP4-12Q9BQ66 201 aa3.06□□□□□ -1.92
ERBB3-202ENST00000411731 KRTAP21-2Q3LI59 83 aa2.97□□□□□ -1.93
ERBB3-202ENST00000411731 LCE1FQ5T754 118 aa2.89□□□□□ -1.95
ERBB3-202ENST00000411731 PRM1P04553 51 aa2.72□□□□□ -1.97
ERBB3-202ENST00000411731 KRTAP4-4Q9BYR3 166 aa2.67□□□□□ -1.98
ERBB3-202ENST00000411731 PHGR1C9JFL3 82 aa2.66□□□□□ -1.98
ERBB3-202ENST00000411731 INE1O15225 51 aa2.66□□□□□ -1.98
ERBB3-202ENST00000411731 MUC19Q7Z5P9 8384 aa2.4□□□□□ -2.03
ERBB3-202ENST00000411731 KRTAP21-1Q3LI58 79 aa1.94□□□□□ -2.1
ERBB3-202ENST00000411731 MUC16Q8WXI7 14507 aa1.71□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 131 ms