RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 H3BS24 57 aa5.54□□□□□ -1.52
HLA-DQB2-229ENST00000411527 KRTAP4-11Q9BYQ6 195 aa5.52□□□□□ -1.53
HLA-DQB2-229ENST00000411527 A8MU10 97 aa5.5□□□□□ -1.53
HLA-DQB2-229ENST00000411527 DSTQ03001 7570 aaKnown RBP5.49□□□□□ -1.53
HLA-DQB2-229ENST00000411527 UQCR11O14957 56 aa5.49□□□□□ -1.53
HLA-DQB2-229ENST00000411527 SPATA8Q6RVD6 105 aa5.46□□□□□ -1.54
HLA-DQB2-229ENST00000411527 MIR22HGQ0VDD5 57 aa5.45□□□□□ -1.54
HLA-DQB2-229ENST00000411527 LCE5AQ5TCM9 118 aa5.44□□□□□ -1.54
HLA-DQB2-229ENST00000411527 KRTAP19-7Q3SYF9 63 aa5.35□□□□□ -1.55
HLA-DQB2-229ENST00000411527 KRTAP5-3Q6L8H2 238 aa5.34□□□□□ -1.55
HLA-DQB2-229ENST00000411527 KRTAP19-3Q7Z4W3 81 aa5.34□□□□□ -1.55
HLA-DQB2-229ENST00000411527 MT1EP04732 61 aa5.32□□□□□ -1.56
HLA-DQB2-229ENST00000411527 CAMK2N1Q7Z7J9 78 aa5.29□□□□□ -1.56
HLA-DQB2-229ENST00000411527 K7ERS5 55 aa5.27□□□□□ -1.57
HLA-DQB2-229ENST00000411527 PRAC1Q96KF2 57 aa5.24□□□□□ -1.57
HLA-DQB2-229ENST00000411527 KRTAP13-4Q3LI77 160 aa5.22□□□□□ -1.57
HLA-DQB2-229ENST00000411527 MT4P47944 62 aa5.21□□□□□ -1.58
HLA-DQB2-229ENST00000411527 A0A1B0GU33 70 aa5.2□□□□□ -1.58
HLA-DQB2-229ENST00000411527 MT1GP13640 62 aa5.19□□□□□ -1.58
HLA-DQB2-229ENST00000411527 HMCN1Q96RW7 5635 aa5.19□□□□□ -1.58
HLA-DQB2-229ENST00000411527 PP632Q6XCG6 107 aa5.15□□□□□ -1.59
HLA-DQB2-229ENST00000411527 A0A0D9SG42 100 aa5.14□□□□□ -1.59
HLA-DQB2-229ENST00000411527 KRTAP19-5Q3LI72 72 aa5.14□□□□□ -1.59
HLA-DQB2-229ENST00000411527 AHNAK2Q8IVF2 5795 aa5.14□□□□□ -1.59
HLA-DQB2-229ENST00000411527 MT1MQ8N339 61 aa5.09□□□□□ -1.59
HLA-DQB2-229ENST00000411527 KRTAP25-1Q3LHN0 102 aa5.08□□□□□ -1.6
HLA-DQB2-229ENST00000411527 KRTAP5-10Q6L8G5 202 aa5.07□□□□□ -1.6
HLA-DQB2-229ENST00000411527 KRTAP5-4Q6L8H1 288 aa5.03□□□□□ -1.6
HLA-DQB2-229ENST00000411527 MT1LQ93083 61 aa5.03□□□□□ -1.6
HLA-DQB2-229ENST00000411527 KRTAP4-3Q9BYR4 195 aa5.01□□□□□ -1.61
HLA-DQB2-229ENST00000411527 SPINT4Q6UDR6 99 aa5□□□□□ -1.61
HLA-DQB2-229ENST00000411527 ROMO1P60602 79 aa4.99□□□□□ -1.61
HLA-DQB2-229ENST00000411527 KRTAP5-7Q6L8G8 165 aa4.92□□□□□ -1.62
HLA-DQB2-229ENST00000411527 KRTAP12-1P59990 96 aa4.91□□□□□ -1.62
HLA-DQB2-229ENST00000411527 C10orf95Q9H7T3 257 aa4.89□□□□□ -1.63
HLA-DQB2-229ENST00000411527 LCE3AQ5TA76 89 aa4.86□□□□□ -1.63
HLA-DQB2-229ENST00000411527 TNP1P09430 55 aa4.78□□□□□ -1.64
HLA-DQB2-229ENST00000411527 KRTAP20-2Q3LI61 65 aa4.78□□□□□ -1.64
HLA-DQB2-229ENST00000411527 SPRR5A0A1B0GTR4 108 aa4.73□□□□□ -1.65
HLA-DQB2-229ENST00000411527 KRTAP5-5Q701N2 237 aaPredicted RBP4.68□□□□□ -1.66
HLA-DQB2-229ENST00000411527 KRTAP12-3P60328 96 aa4.67□□□□□ -1.66
HLA-DQB2-229ENST00000411527 KRTAP12-4P60329 112 aa4.67□□□□□ -1.66
HLA-DQB2-229ENST00000411527 KRTAP15-1Q3LI76 137 aa4.58□□□□□ -1.68
HLA-DQB2-229ENST00000411527 SYNE1Q8NF91 8797 aaKnown RBP4.58□□□□□ -1.68
HLA-DQB2-229ENST00000411527 NDUFAF8A1L188 74 aa4.52□□□□□ -1.69
HLA-DQB2-229ENST00000411527 KRTAP23-1A1A580 65 aa4.42□□□□□ -1.7
HLA-DQB2-229ENST00000411527 LUZP6Q538Z0 58 aa4.41□□□□□ -1.7
HLA-DQB2-229ENST00000411527 KRTAP5-2Q701N4 177 aa4.34□□□□□ -1.71
HLA-DQB2-229ENST00000411527 KRTAP5-8O75690 187 aa4.31□□□□□ -1.72
HLA-DQB2-229ENST00000411527 AHNAKQ09666 5890 aaKnown RBP4.31□□□□□ -1.72
HLA-DQB2-229ENST00000411527 MUC5ACP98088 5654 aa4.29□□□□□ -1.72
HLA-DQB2-229ENST00000411527 A0A0A0MQY5 61 aa4.28□□□□□ -1.72
HLA-DQB2-229ENST00000411527 MT1AP04731 61 aa4.28□□□□□ -1.72
HLA-DQB2-229ENST00000411527 KRTAP6-1Q3LI64 71 aa4.28□□□□□ -1.72
HLA-DQB2-229ENST00000411527 LCE3CQ5T5A8 94 aa4.27□□□□□ -1.73
HLA-DQB2-229ENST00000411527 MUC5BQ9HC84 5762 aaPredicted RBP4.24□□□□□ -1.73
HLA-DQB2-229ENST00000411527 OBSCNQ5VST9 7968 aa4.16□□□□□ -1.74
HLA-DQB2-229ENST00000411527 KRTAP6-2Q3LI66 62 aa4.16□□□□□ -1.74
HLA-DQB2-229ENST00000411527 KRTAP9-6A8MVA2 160 aa4.04□□□□□ -1.76
HLA-DQB2-229ENST00000411527 KRTAP5-1Q6L8H4 278 aa3.96□□□□□ -1.78
HLA-DQB2-229ENST00000411527 MT3P25713 68 aa3.94□□□□□ -1.78
HLA-DQB2-229ENST00000411527 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.9□□□□□ -1.79
HLA-DQB2-229ENST00000411527 INE1O15225 51 aa3.86□□□□□ -1.79
HLA-DQB2-229ENST00000411527 KRTAP5-11Q6L8G4 156 aa3.73□□□□□ -1.81
HLA-DQB2-229ENST00000411527 LCE1EQ5T753 118 aa3.67□□□□□ -1.82
HLA-DQB2-229ENST00000411527 LCE1BQ5T7P3 118 aa3.52□□□□□ -1.85
HLA-DQB2-229ENST00000411527 LCE1CQ5T751 118 aa3.41□□□□□ -1.86
HLA-DQB2-229ENST00000411527 KRTAP4-4Q9BYR3 166 aa3.25□□□□□ -1.89
HLA-DQB2-229ENST00000411527 LCE1FQ5T754 118 aa3.11□□□□□ -1.91
HLA-DQB2-229ENST00000411527 LCE3DQ9BYE3 92 aa3.02□□□□□ -1.93
HLA-DQB2-229ENST00000411527 PHGR1C9JFL3 82 aa2.98□□□□□ -1.93
HLA-DQB2-229ENST00000411527 KRTAP21-2Q3LI59 83 aa2.82□□□□□ -1.96
HLA-DQB2-229ENST00000411527 LCE3EQ5T5B0 92 aa2.78□□□□□ -1.96
HLA-DQB2-229ENST00000411527 MUC19Q7Z5P9 8384 aa2.61□□□□□ -1.99
HLA-DQB2-229ENST00000411527 PRM1P04553 51 aa2.59□□□□□ -1.99
HLA-DQB2-229ENST00000411527 KRTAP21-1Q3LI58 79 aa2.26□□□□□ -2.05
HLA-DQB2-229ENST00000411527 MUC16Q8WXI7 14507 aa1.85□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 49.6 ms