RNA–Protein interactions for RNA: ENST00000409617.5

SERF2-208, Transcript of small EDRK-rich factor 2, human

TSL 2

Gene SERF2, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SERF2-208	ENST00000409617	LCE5A	Q5TCM9	118 aa		5.36	□□□□□ -1.55
SERF2-208	ENST00000409617	MT1G	P13640	62 aa		5.3	□□□□□ -1.56
SERF2-208	ENST00000409617	MT1L	Q93083	61 aa		5.28	□□□□□ -1.56
SERF2-208	ENST00000409617	KRTAP2-2	Q9BYT5	123 aa		5.28	□□□□□ -1.56
SERF2-208	ENST00000409617	KRTAP2-1	Q9BYU5	128 aa		5.28	□□□□□ -1.56
SERF2-208	ENST00000409617	KRTAP23-1	A1A580	65 aa		5.26	□□□□□ -1.57
SERF2-208	ENST00000409617	KRTAP12-3	P60328	96 aa		5.26	□□□□□ -1.57
SERF2-208	ENST00000409617	LCE3B	Q5TA77	95 aa		5.26	□□□□□ -1.57
SERF2-208	ENST00000409617	ROMO1	P60602	79 aa		5.25	□□□□□ -1.57
SERF2-208	ENST00000409617	PP632	Q6XCG6	107 aa		5.23	□□□□□ -1.57
SERF2-208	ENST00000409617	MT1M	Q8N339	61 aa		5.19	□□□□□ -1.58
SERF2-208	ENST00000409617	DST	Q03001	7570 aa	Known RBP	5.12	□□□□□ -1.59
SERF2-208	ENST00000409617	BRK1	Q8WUW1	75 aa		5.07	□□□□□ -1.6
SERF2-208	ENST00000409617	KRTAP19-4	Q3LI73	84 aa		5.04	□□□□□ -1.6
SERF2-208	ENST00000409617	KRTAP4-3	Q9BYR4	195 aa		5.04	□□□□□ -1.6
SERF2-208	ENST00000409617	KRTAP4-7	Q9BYR0	210 aa		5.02	□□□□□ -1.61
SERF2-208	ENST00000409617	KRTAP15-1	Q3LI76	137 aa		5.01	□□□□□ -1.61
SERF2-208	ENST00000409617	LCE3C	Q5T5A8	94 aa		4.88	□□□□□ -1.63
SERF2-208	ENST00000409617	LCE4A	Q5TA78	99 aa		4.85	□□□□□ -1.63
SERF2-208	ENST00000409617	KRTAP5-4	Q6L8H1	288 aa		4.82	□□□□□ -1.64
SERF2-208	ENST00000409617	KRTAP4-9	Q9BYQ8	210 aa		4.81	□□□□□ -1.64
SERF2-208	ENST00000409617	PMAIP1	Q13794	54 aa		4.79	□□□□□ -1.64
SERF2-208	ENST00000409617	LCE1D	Q5T752	114 aa		4.75	□□□□□ -1.65
SERF2-208	ENST00000409617	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.75	□□□□□ -1.65
SERF2-208	ENST00000409617	LOC100996750	A0A140TA64	210 aa		4.74	□□□□□ -1.65
SERF2-208	ENST00000409617	MT4	P47944	62 aa		4.71	□□□□□ -1.66
SERF2-208	ENST00000409617	GPR98	Q8WXG9	6306 aa		4.67	□□□□□ -1.66
SERF2-208	ENST00000409617	PRO0628	Q9UI54	55 aa		4.67	□□□□□ -1.66
SERF2-208	ENST00000409617	KRTAP4-6	Q9BYQ5	205 aa		4.63	□□□□□ -1.67
SERF2-208	ENST00000409617	HMCN1	Q96RW7	5635 aa		4.6	□□□□□ -1.67
SERF2-208	ENST00000409617	KRTAP9-6	A8MVA2	160 aa		4.59	□□□□□ -1.67
SERF2-208	ENST00000409617	SPRR5	A0A1B0GTR4	108 aa		4.54	□□□□□ -1.68
SERF2-208	ENST00000409617	KRTAP12-4	P60329	112 aa		4.54	□□□□□ -1.68
SERF2-208	ENST00000409617	PRAC1	Q96KF2	57 aa		4.54	□□□□□ -1.68
SERF2-208	ENST00000409617	KRTAP20-2	Q3LI61	65 aa		4.51	□□□□□ -1.69
SERF2-208	ENST00000409617	MT1A	P04731	61 aa		4.5	□□□□□ -1.69
SERF2-208	ENST00000409617	SYNE1	Q8NF91	8797 aa	Known RBP	4.48	□□□□□ -1.69
SERF2-208	ENST00000409617	KRTAP6-1	Q3LI64	71 aa		4.44	□□□□□ -1.7
SERF2-208	ENST00000409617	KTN1-AS1	Q86SY8	53 aa		4.39	□□□□□ -1.71
SERF2-208	ENST00000409617	KRTAP5-3	Q6L8H2	238 aa		4.38	□□□□□ -1.71
SERF2-208	ENST00000409617	AHNAK2	Q8IVF2	5795 aa		4.34	□□□□□ -1.71
SERF2-208	ENST00000409617	KRTAP9-4	Q9BYQ2	154 aa		4.33	□□□□□ -1.72
SERF2-208	ENST00000409617	KRTAP5-10	Q6L8G5	202 aa		4.28	□□□□□ -1.72
SERF2-208	ENST00000409617	KRTAP5-2	Q701N4	177 aa		4.27	□□□□□ -1.73
SERF2-208	ENST00000409617	KRTAP6-2	Q3LI66	62 aa		4.19	□□□□□ -1.74
SERF2-208	ENST00000409617	SVIP	Q8NHG7	77 aa		4.14	□□□□□ -1.75
SERF2-208	ENST00000409617	MT3	P25713	68 aa		4.1	□□□□□ -1.75
SERF2-208	ENST00000409617	KRTAP5-7	Q6L8G8	165 aa		4.09	□□□□□ -1.75
SERF2-208	ENST00000409617	KRTAP4-11	Q9BYQ6	195 aa		4.05	□□□□□ -1.76
SERF2-208	ENST00000409617	KRTAP5-8	O75690	187 aa		3.92	□□□□□ -1.78
SERF2-208	ENST00000409617	OBSCN	Q5VST9	7968 aa		3.88	□□□□□ -1.79
SERF2-208	ENST00000409617	KRTAP4-12	Q9BQ66	201 aa		3.86	□□□□□ -1.79
SERF2-208	ENST00000409617	LUZP6	Q538Z0	58 aa		3.8	□□□□□ -1.8
SERF2-208	ENST00000409617	KRTAP5-1	Q6L8H4	278 aa		3.77	□□□□□ -1.81
SERF2-208	ENST00000409617	KRTAP9-9	Q9BYP9	154 aa		3.74	□□□□□ -1.81
SERF2-208	ENST00000409617	LCE1E	Q5T753	118 aa		3.73	□□□□□ -1.81
SERF2-208	ENST00000409617	MUC5AC	P98088	5654 aa		3.6	□□□□□ -1.83
SERF2-208	ENST00000409617	LCE3D	Q9BYE3	92 aa		3.57	□□□□□ -1.84
SERF2-208	ENST00000409617	AHNAK	Q09666	5890 aa	Known RBP	3.54	□□□□□ -1.84
SERF2-208	ENST00000409617	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.53	□□□□□ -1.84
SERF2-208	ENST00000409617	KRTAP4-2	Q9BYR5	136 aa		3.48	□□□□□ -1.85
SERF2-208	ENST00000409617	LCE1C	Q5T751	118 aa		3.45	□□□□□ -1.86
SERF2-208	ENST00000409617	LCE1B	Q5T7P3	118 aa		3.45	□□□□□ -1.86
SERF2-208	ENST00000409617		H3BS24	57 aa		3.44	□□□□□ -1.86
SERF2-208	ENST00000409617	LCE3E	Q5T5B0	92 aa		3.4	□□□□□ -1.87
SERF2-208	ENST00000409617	NDUFAF8	A1L188	74 aa		3.28	□□□□□ -1.88
SERF2-208	ENST00000409617	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.19	□□□□□ -1.9
SERF2-208	ENST00000409617	KRTAP5-11	Q6L8G4	156 aa		3.1	□□□□□ -1.91
SERF2-208	ENST00000409617	LCE1F	Q5T754	118 aa		2.96	□□□□□ -1.94
SERF2-208	ENST00000409617	KRTAP21-2	Q3LI59	83 aa		2.94	□□□□□ -1.94
SERF2-208	ENST00000409617		A0A0A0MQY5	61 aa		2.72	□□□□□ -1.97
SERF2-208	ENST00000409617	INE1	O15225	51 aa		2.71	□□□□□ -1.98
SERF2-208	ENST00000409617	PRM1	P04553	51 aa		2.69	□□□□□ -1.98
SERF2-208	ENST00000409617	PHGR1	C9JFL3	82 aa		2.67	□□□□□ -1.98
SERF2-208	ENST00000409617	KRTAP4-4	Q9BYR3	166 aa		2.62	□□□□□ -1.99
SERF2-208	ENST00000409617	MUC19	Q7Z5P9	8384 aa		2.37	□□□□□ -2.03
SERF2-208	ENST00000409617	KRTAP21-1	Q3LI58	79 aa		1.88	□□□□□ -2.11
SERF2-208	ENST00000409617	MUC16	Q8WXI7	14507 aa		1.7	□□□□□ -2.14

Retrieved 78 of 20,778 RNA–protein pairs in 91.1 ms