RNA–Protein interactions for RNA: ENST00000409460.5

VWA3B-201, Transcript of von Willebrand factor A domain containing 3B, humanhuman

TSL 1 (best)

Gene VWA3B, Length 4,844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3B-201ENST00000409460 SPRR2DP22532 72 aa3.62□□□□□ -1.83
VWA3B-201ENST00000409460 KRTAP2-2Q9BYT5 123 aa3.57□□□□□ -1.84
VWA3B-201ENST00000409460 KRTAP2-1Q9BYU5 128 aa3.57□□□□□ -1.84
VWA3B-201ENST00000409460 KRTAP23-1A1A580 65 aa3.53□□□□□ -1.84
VWA3B-201ENST00000409460 MT1XP80297 61 aa3.53□□□□□ -1.84
VWA3B-201ENST00000409460 LCE1AQ5T7P2 110 aa3.5□□□□□ -1.85
VWA3B-201ENST00000409460 LCE3BQ5TA77 95 aa3.46□□□□□ -1.86
VWA3B-201ENST00000409460 KRTAP10-12P60413 245 aa3.41□□□□□ -1.86
VWA3B-201ENST00000409460 KRTAP10-7P60409 375 aaPredicted RBP3.36□□□□□ -1.87
VWA3B-201ENST00000409460 KRTAP4-8A0A0G2JLE6 195 aa3.36□□□□□ -1.87
VWA3B-201ENST00000409460 KRTAP4-8Q9BYQ9 185 aa3.36□□□□□ -1.87
VWA3B-201ENST00000409460 MDN1Q9NU22 5596 aa3.34□□□□□ -1.87
VWA3B-201ENST00000409460 KMT2DO14686 5537 aa3.34□□□□□ -1.88
VWA3B-201ENST00000409460 MUC12Q9UKN1 5478 aa3.29□□□□□ -1.88
VWA3B-201ENST00000409460 KRTAP19-3Q7Z4W3 81 aa3.25□□□□□ -1.89
VWA3B-201ENST00000409460 LCE3AQ5TA76 89 aa3.24□□□□□ -1.89
VWA3B-201ENST00000409460 GPR98Q8WXG9 6306 aa3.24□□□□□ -1.89
VWA3B-201ENST00000409460 MT1GP13640 62 aa3.23□□□□□ -1.89
VWA3B-201ENST00000409460 LCE4AQ5TA78 99 aa3.19□□□□□ -1.9
VWA3B-201ENST00000409460 MT1EP04732 61 aa3.18□□□□□ -1.9
VWA3B-201ENST00000409460 KRTAP12-3P60328 96 aa3.17□□□□□ -1.9
VWA3B-201ENST00000409460 KRTAP19-5Q3LI72 72 aa3.15□□□□□ -1.9
VWA3B-201ENST00000409460 LCE5AQ5TCM9 118 aa3.15□□□□□ -1.9
VWA3B-201ENST00000409460 KRTAP4-9Q9BYQ8 210 aa3.12□□□□□ -1.91
VWA3B-201ENST00000409460 OBSCNQ5VST9 7968 aa3.11□□□□□ -1.91
VWA3B-201ENST00000409460 KRTAP19-7Q3SYF9 63 aa3.1□□□□□ -1.91
VWA3B-201ENST00000409460 MT4P47944 62 aa3.1□□□□□ -1.91
VWA3B-201ENST00000409460 MT1MQ8N339 61 aa3.07□□□□□ -1.92
VWA3B-201ENST00000409460 KRTAP19-4Q3LI73 84 aa3.04□□□□□ -1.92
VWA3B-201ENST00000409460 LCE1DQ5T752 114 aa3.04□□□□□ -1.92
VWA3B-201ENST00000409460 MT1LQ93083 61 aa3.03□□□□□ -1.92
VWA3B-201ENST00000409460 KRTAP12-4P60329 112 aa3.02□□□□□ -1.93
VWA3B-201ENST00000409460 SYNE1Q8NF91 8797 aaKnown RBP2.94□□□□□ -1.94
VWA3B-201ENST00000409460 DSTQ03001 7570 aaKnown RBP2.88□□□□□ -1.95
VWA3B-201ENST00000409460 LCE3CQ5T5A8 94 aa2.88□□□□□ -1.95
VWA3B-201ENST00000409460 KRTAP9-6A8MVA2 160 aa2.86□□□□□ -1.95
VWA3B-201ENST00000409460 KRTAP5-4Q6L8H1 288 aa2.85□□□□□ -1.95
VWA3B-201ENST00000409460 KRTAP4-3Q9BYR4 195 aa2.84□□□□□ -1.95
VWA3B-201ENST00000409460 HMCN1Q96RW7 5635 aa2.82□□□□□ -1.96
VWA3B-201ENST00000409460 KRTAP4-6Q9BYQ5 205 aa2.82□□□□□ -1.96
VWA3B-201ENST00000409460 AHNAK2Q8IVF2 5795 aa2.8□□□□□ -1.96
VWA3B-201ENST00000409460 KRTAP5-3Q6L8H2 238 aa2.8□□□□□ -1.96
VWA3B-201ENST00000409460 KRTAP20-2Q3LI61 65 aa2.79□□□□□ -1.96
VWA3B-201ENST00000409460 KRTAP5-10Q6L8G5 202 aa2.78□□□□□ -1.96
VWA3B-201ENST00000409460 KRTAP5-7Q6L8G8 165 aa2.77□□□□□ -1.97
VWA3B-201ENST00000409460 KRTAP4-7Q9BYR0 210 aa2.75□□□□□ -1.97
VWA3B-201ENST00000409460 MT1AP04731 61 aa2.67□□□□□ -1.98
VWA3B-201ENST00000409460 KRTAP5-5Q701N2 237 aaPredicted RBP2.63□□□□□ -1.99
VWA3B-201ENST00000409460 LOC100996750A0A140TA64 210 aa2.61□□□□□ -1.99
VWA3B-201ENST00000409460 LCE1EQ5T753 118 aa2.6□□□□□ -1.99
VWA3B-201ENST00000409460 KRTAP4-11Q9BYQ6 195 aa2.59□□□□□ -1.99
VWA3B-201ENST00000409460 KRTAP9-9Q9BYP9 154 aa2.58□□□□□ -2
VWA3B-201ENST00000409460 MT3P25713 68 aa2.56□□□□□ -2
VWA3B-201ENST00000409460 KRTAP9-4Q9BYQ2 154 aa2.55□□□□□ -2
VWA3B-201ENST00000409460 PRM1P04553 51 aa2.54□□□□□ -2
VWA3B-201ENST00000409460 AHNAKQ09666 5890 aaKnown RBP2.53□□□□□ -2.01
VWA3B-201ENST00000409460 KRTAP6-1Q3LI64 71 aa2.52□□□□□ -2.01
VWA3B-201ENST00000409460 MUC19Q7Z5P9 8384 aa2.49□□□□□ -2.01
VWA3B-201ENST00000409460 KRTAP6-2Q3LI66 62 aa2.48□□□□□ -2.01
VWA3B-201ENST00000409460 KRTAP5-2Q701N4 177 aa2.46□□□□□ -2.02
VWA3B-201ENST00000409460 KRTAP5-8O75690 187 aa2.42□□□□□ -2.02
VWA3B-201ENST00000409460 LCE3EQ5T5B0 92 aa2.42□□□□□ -2.02
VWA3B-201ENST00000409460 LCE3DQ9BYE3 92 aa2.41□□□□□ -2.02
VWA3B-201ENST00000409460 LCE1FQ5T754 118 aa2.29□□□□□ -2.04
VWA3B-201ENST00000409460 MUC5ACP98088 5654 aa2.29□□□□□ -2.04
VWA3B-201ENST00000409460 MUC5BQ9HC84 5762 aaPredicted RBP2.28□□□□□ -2.04
VWA3B-201ENST00000409460 LCE1BQ5T7P3 118 aa2.24□□□□□ -2.05
VWA3B-201ENST00000409460 KRTAP5-1Q6L8H4 278 aa2.19□□□□□ -2.06
VWA3B-201ENST00000409460 LCE1CQ5T751 118 aa2.03□□□□□ -2.08
VWA3B-201ENST00000409460 KRTAP4-2Q9BYR5 136 aa1.98□□□□□ -2.09
VWA3B-201ENST00000409460 KRTAP4-12Q9BQ66 201 aa1.92□□□□□ -2.1
VWA3B-201ENST00000409460 KRTAP5-11Q6L8G4 156 aa1.86□□□□□ -2.11
VWA3B-201ENST00000409460 PHGR1C9JFL3 82 aa1.8□□□□□ -2.12
VWA3B-201ENST00000409460 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.79□□□□□ -2.12
VWA3B-201ENST00000409460 KRTAP21-2Q3LI59 83 aa1.59□□□□□ -2.15
VWA3B-201ENST00000409460 KRTAP4-4Q9BYR3 166 aa1.56□□□□□ -2.16
VWA3B-201ENST00000409460 KRTAP21-1Q3LI58 79 aa1.55□□□□□ -2.16
VWA3B-201ENST00000409460 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 49 ms