RNA–Protein interactions for RNA: ENST00000409248.8

C4orf48-201, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C4orf48, Length 433 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-201ENST00000409248 KRTAP2-2Q9BYT5 123 aa7.62□□□□□ -1.19
C4orf48-201ENST00000409248 KRTAP2-1Q9BYU5 128 aa7.62□□□□□ -1.19
C4orf48-201ENST00000409248 KRTAP23-1A1A580 65 aa7.6□□□□□ -1.19
C4orf48-201ENST00000409248 KRTAP19-3Q7Z4W3 81 aa7.6□□□□□ -1.19
C4orf48-201ENST00000409248 LCE3BQ5TA77 95 aa7.58□□□□□ -1.2
C4orf48-201ENST00000409248 LCE5AQ5TCM9 118 aa7.57□□□□□ -1.2
C4orf48-201ENST00000409248 KRTAP12-3P60328 96 aa7.5□□□□□ -1.21
C4orf48-201ENST00000409248 PP632Q6XCG6 107 aa7.48□□□□□ -1.21
C4orf48-201ENST00000409248 PMAIP1Q13794 54 aa7.47□□□□□ -1.21
C4orf48-201ENST00000409248 MT1GP13640 62 aa7.45□□□□□ -1.22
C4orf48-201ENST00000409248 PRO0628Q9UI54 55 aa7.42□□□□□ -1.22
C4orf48-201ENST00000409248 MT1LQ93083 61 aa7.4□□□□□ -1.22
C4orf48-201ENST00000409248 MT1MQ8N339 61 aa7.32□□□□□ -1.24
C4orf48-201ENST00000409248 DSTQ03001 7570 aaKnown RBP7.27□□□□□ -1.25
C4orf48-201ENST00000409248 KRTAP15-1Q3LI76 137 aa7.21□□□□□ -1.26
C4orf48-201ENST00000409248 KRTAP19-4Q3LI73 84 aa7.12□□□□□ -1.27
C4orf48-201ENST00000409248 KRTAP4-3Q9BYR4 195 aa7.08□□□□□ -1.28
C4orf48-201ENST00000409248 PRAC1Q96KF2 57 aa7.04□□□□□ -1.28
C4orf48-201ENST00000409248 KRTAP4-7Q9BYR0 210 aa7.02□□□□□ -1.29
C4orf48-201ENST00000409248 KTN1-AS1Q86SY8 53 aa6.97□□□□□ -1.29
C4orf48-201ENST00000409248 LCE3CQ5T5A8 94 aa6.95□□□□□ -1.3
C4orf48-201ENST00000409248 LCE4AQ5TA78 99 aa6.94□□□□□ -1.3
C4orf48-201ENST00000409248 KRTAP4-9Q9BYQ8 210 aa6.94□□□□□ -1.3
C4orf48-201ENST00000409248 LCE1DQ5T752 114 aa6.85□□□□□ -1.31
C4orf48-201ENST00000409248 KRTAP5-4Q6L8H1 288 aa6.83□□□□□ -1.32
C4orf48-201ENST00000409248 MT4P47944 62 aa6.8□□□□□ -1.32
C4orf48-201ENST00000409248 HMCN1Q96RW7 5635 aa6.68□□□□□ -1.34
C4orf48-201ENST00000409248 KRTAP5-5Q701N2 237 aaPredicted RBP6.67□□□□□ -1.34
C4orf48-201ENST00000409248 SVIPQ8NHG7 77 aa6.63□□□□□ -1.35
C4orf48-201ENST00000409248 LOC100996750A0A140TA64 210 aa6.62□□□□□ -1.35
C4orf48-201ENST00000409248 KRTAP4-6Q9BYQ5 205 aa6.6□□□□□ -1.35
C4orf48-201ENST00000409248 GPR98Q8WXG9 6306 aa6.55□□□□□ -1.36
C4orf48-201ENST00000409248 KRTAP9-6A8MVA2 160 aa6.51□□□□□ -1.37
C4orf48-201ENST00000409248 KRTAP12-4P60329 112 aa6.49□□□□□ -1.37
C4orf48-201ENST00000409248 SPRR5A0A1B0GTR4 108 aa6.45□□□□□ -1.38
C4orf48-201ENST00000409248 KRTAP20-2Q3LI61 65 aa6.44□□□□□ -1.38
C4orf48-201ENST00000409248 AHNAK2Q8IVF2 5795 aa6.35□□□□□ -1.39
C4orf48-201ENST00000409248 MT1AP04731 61 aa6.32□□□□□ -1.4
C4orf48-201ENST00000409248 SYNE1Q8NF91 8797 aaKnown RBP6.3□□□□□ -1.4
C4orf48-201ENST00000409248 KRTAP6-1Q3LI64 71 aa6.23□□□□□ -1.41
C4orf48-201ENST00000409248 KRTAP5-10Q6L8G5 202 aa6.23□□□□□ -1.41
C4orf48-201ENST00000409248 KRTAP5-3Q6L8H2 238 aa6.21□□□□□ -1.42
C4orf48-201ENST00000409248 KRTAP9-4Q9BYQ2 154 aa6.06□□□□□ -1.44
C4orf48-201ENST00000409248 KRTAP5-2Q701N4 177 aa6.03□□□□□ -1.44
C4orf48-201ENST00000409248 KRTAP5-7Q6L8G8 165 aa5.98□□□□□ -1.45
C4orf48-201ENST00000409248 KRTAP6-2Q3LI66 62 aa5.92□□□□□ -1.46
C4orf48-201ENST00000409248 LUZP6Q538Z0 58 aa5.9□□□□□ -1.46
C4orf48-201ENST00000409248 KRTAP4-11Q9BYQ6 195 aa5.82□□□□□ -1.48
C4orf48-201ENST00000409248 MT3P25713 68 aa5.78□□□□□ -1.48
C4orf48-201ENST00000409248 KRTAP5-8O75690 187 aa5.6□□□□□ -1.51
C4orf48-201ENST00000409248 OBSCNQ5VST9 7968 aa5.51□□□□□ -1.53
C4orf48-201ENST00000409248 KRTAP5-1Q6L8H4 278 aa5.34□□□□□ -1.55
C4orf48-201ENST00000409248 KRTAP9-9Q9BYP9 154 aa5.31□□□□□ -1.56
C4orf48-201ENST00000409248 NDUFAF8A1L188 74 aa5.28□□□□□ -1.56
C4orf48-201ENST00000409248 LCE1EQ5T753 118 aa5.24□□□□□ -1.57
C4orf48-201ENST00000409248 MUC5ACP98088 5654 aa5.17□□□□□ -1.58
C4orf48-201ENST00000409248 MUC5BQ9HC84 5762 aaPredicted RBP5.16□□□□□ -1.58
C4orf48-201ENST00000409248 LCE3DQ9BYE3 92 aa5.14□□□□□ -1.59
C4orf48-201ENST00000409248 AHNAKQ09666 5890 aaKnown RBP5.14□□□□□ -1.59
C4orf48-201ENST00000409248 LCE3EQ5T5B0 92 aa4.94□□□□□ -1.62
C4orf48-201ENST00000409248 LCE1BQ5T7P3 118 aa4.91□□□□□ -1.62
C4orf48-201ENST00000409248 KRTAP4-2Q9BYR5 136 aa4.9□□□□□ -1.63
C4orf48-201ENST00000409248 LCE1CQ5T751 118 aa4.86□□□□□ -1.63
C4orf48-201ENST00000409248 A0A0A0MQY5 61 aa4.53□□□□□ -1.68
C4orf48-201ENST00000409248 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.46□□□□□ -1.7
C4orf48-201ENST00000409248 KRTAP5-11Q6L8G4 156 aa4.4□□□□□ -1.71
C4orf48-201ENST00000409248 INE1O15225 51 aa4.36□□□□□ -1.71
C4orf48-201ENST00000409248 KRTAP4-12Q9BQ66 201 aa4.33□□□□□ -1.72
C4orf48-201ENST00000409248 LCE1FQ5T754 118 aa4.22□□□□□ -1.73
C4orf48-201ENST00000409248 KRTAP21-2Q3LI59 83 aa4.1□□□□□ -1.75
C4orf48-201ENST00000409248 PRM1P04553 51 aa4.03□□□□□ -1.76
C4orf48-201ENST00000409248 PHGR1C9JFL3 82 aa3.77□□□□□ -1.81
C4orf48-201ENST00000409248 KRTAP4-4Q9BYR3 166 aa3.7□□□□□ -1.82
C4orf48-201ENST00000409248 H3BS24 57 aa3.56□□□□□ -1.84
C4orf48-201ENST00000409248 MUC19Q7Z5P9 8384 aa3.39□□□□□ -1.87
C4orf48-201ENST00000409248 KRTAP21-1Q3LI58 79 aa2.78□□□□□ -1.96
C4orf48-201ENST00000409248 MUC16Q8WXI7 14507 aa2.45□□□□□ -2.02
Retrieved 77 of 20,778 RNA–protein pairs in 8.7 ms