RNA–Protein interactions for RNA: ENST00000405600.5

CGREF1-206, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS P2 TSL 4 BASIC

Gene CGREF1, Length 1,346 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-206ENST00000405600 PP632Q6XCG6 107 aa6.73□□□□□ -1.33
CGREF1-206ENST00000405600 KMT2DO14686 5537 aa6.72□□□□□ -1.33
CGREF1-206ENST00000405600 LCE5AQ5TCM9 118 aa6.72□□□□□ -1.33
CGREF1-206ENST00000405600 SPRR2FQ96RM1 72 aa6.72□□□□□ -1.33
CGREF1-206ENST00000405600 KRTAP23-1A1A580 65 aa6.7□□□□□ -1.34
CGREF1-206ENST00000405600 KRTAP8-1Q8IUC2 63 aa6.67□□□□□ -1.34
CGREF1-206ENST00000405600 MDN1Q9NU22 5596 aa6.66□□□□□ -1.34
CGREF1-206ENST00000405600 SPRR2EP22531 72 aa6.63□□□□□ -1.35
CGREF1-206ENST00000405600 SPRR2BP35325 72 aa6.63□□□□□ -1.35
CGREF1-206ENST00000405600 SPRR2AP35326 72 aa6.63□□□□□ -1.35
CGREF1-206ENST00000405600 KRTAP4-11Q9BYQ6 195 aa6.59□□□□□ -1.35
CGREF1-206ENST00000405600 KRTAP10-12P60413 245 aa6.56□□□□□ -1.36
CGREF1-206ENST00000405600 KRTAP4-2Q9BYR5 136 aa6.55□□□□□ -1.36
CGREF1-206ENST00000405600 KRTAP2-3P0C7H8 128 aa6.54□□□□□ -1.36
CGREF1-206ENST00000405600 KRTAP2-4Q9BYR9 128 aa6.54□□□□□ -1.36
CGREF1-206ENST00000405600 KRTAP10-7P60409 375 aaPredicted RBP6.53□□□□□ -1.36
CGREF1-206ENST00000405600 LCE3AQ5TA76 89 aa6.48□□□□□ -1.37
CGREF1-206ENST00000405600 LCE1AQ5T7P2 110 aa6.47□□□□□ -1.37
CGREF1-206ENST00000405600 SPRR2DP22532 72 aa6.41□□□□□ -1.38
CGREF1-206ENST00000405600 KRTAP2-2Q9BYT5 123 aa6.33□□□□□ -1.4
CGREF1-206ENST00000405600 KRTAP2-1Q9BYU5 128 aa6.33□□□□□ -1.4
CGREF1-206ENST00000405600 KRTAP12-3P60328 96 aa6.26□□□□□ -1.41
CGREF1-206ENST00000405600 KRTAP15-1Q3LI76 137 aa6.22□□□□□ -1.41
CGREF1-206ENST00000405600 KRTAP19-5Q3LI72 72 aa6.19□□□□□ -1.42
CGREF1-206ENST00000405600 KRTAP19-7Q3SYF9 63 aa6.11□□□□□ -1.43
CGREF1-206ENST00000405600 MT1EP04732 61 aa6.07□□□□□ -1.44
CGREF1-206ENST00000405600 KRTAP19-3Q7Z4W3 81 aa5.99□□□□□ -1.45
CGREF1-206ENST00000405600 MT1GP13640 62 aa5.89□□□□□ -1.47
CGREF1-206ENST00000405600 DSTQ03001 7570 aaKnown RBP5.89□□□□□ -1.47
CGREF1-206ENST00000405600 MT1LQ93083 61 aa5.89□□□□□ -1.47
CGREF1-206ENST00000405600 LCE3CQ5T5A8 94 aa5.85□□□□□ -1.47
CGREF1-206ENST00000405600 SPRR5A0A1B0GTR4 108 aa5.82□□□□□ -1.48
CGREF1-206ENST00000405600 LUZP6Q538Z0 58 aa5.77□□□□□ -1.49
CGREF1-206ENST00000405600 MT1MQ8N339 61 aa5.75□□□□□ -1.49
CGREF1-206ENST00000405600 KRTAP4-3Q9BYR4 195 aa5.67□□□□□ -1.5
CGREF1-206ENST00000405600 MT4P47944 62 aa5.65□□□□□ -1.51
CGREF1-206ENST00000405600 KRTAP5-3Q6L8H2 238 aa5.58□□□□□ -1.52
CGREF1-206ENST00000405600 NDUFAF8A1L188 74 aa5.49□□□□□ -1.53
CGREF1-206ENST00000405600 GPR98Q8WXG9 6306 aa5.47□□□□□ -1.53
CGREF1-206ENST00000405600 HMCN1Q96RW7 5635 aa5.46□□□□□ -1.54
CGREF1-206ENST00000405600 KRTAP5-4Q6L8H1 288 aa5.44□□□□□ -1.54
CGREF1-206ENST00000405600 KRTAP9-6A8MVA2 160 aa5.41□□□□□ -1.54
CGREF1-206ENST00000405600 KRTAP5-5Q701N2 237 aaPredicted RBP5.25□□□□□ -1.57
CGREF1-206ENST00000405600 AHNAK2Q8IVF2 5795 aa5.23□□□□□ -1.57
CGREF1-206ENST00000405600 KRTAP5-10Q6L8G5 202 aa5.23□□□□□ -1.57
CGREF1-206ENST00000405600 A0A0A0MQY5 61 aa5.2□□□□□ -1.58
CGREF1-206ENST00000405600 KRTAP20-2Q3LI61 65 aa5.19□□□□□ -1.58
CGREF1-206ENST00000405600 KRTAP12-4P60329 112 aa5.17□□□□□ -1.58
CGREF1-206ENST00000405600 MT1AP04731 61 aa5.05□□□□□ -1.6
CGREF1-206ENST00000405600 KRTAP5-7Q6L8G8 165 aa5.01□□□□□ -1.61
CGREF1-206ENST00000405600 SYNE1Q8NF91 8797 aaKnown RBP5.01□□□□□ -1.61
CGREF1-206ENST00000405600 KRTAP6-1Q3LI64 71 aa4.93□□□□□ -1.62
CGREF1-206ENST00000405600 MT3P25713 68 aa4.85□□□□□ -1.63
CGREF1-206ENST00000405600 KRTAP5-2Q701N4 177 aa4.75□□□□□ -1.65
CGREF1-206ENST00000405600 KRTAP6-2Q3LI66 62 aa4.69□□□□□ -1.66
CGREF1-206ENST00000405600 INE1O15225 51 aa4.65□□□□□ -1.67
CGREF1-206ENST00000405600 KRTAP5-8O75690 187 aa4.58□□□□□ -1.68
CGREF1-206ENST00000405600 OBSCNQ5VST9 7968 aa4.5□□□□□ -1.69
CGREF1-206ENST00000405600 LCE1EQ5T753 118 aa4.48□□□□□ -1.69
CGREF1-206ENST00000405600 KRTAP5-11Q6L8G4 156 aa4.43□□□□□ -1.7
CGREF1-206ENST00000405600 LCE3DQ9BYE3 92 aa4.41□□□□□ -1.7
CGREF1-206ENST00000405600 MUC5BQ9HC84 5762 aaPredicted RBP4.33□□□□□ -1.72
CGREF1-206ENST00000405600 LCE1FQ5T754 118 aa4.33□□□□□ -1.72
CGREF1-206ENST00000405600 LCE3EQ5T5B0 92 aa4.3□□□□□ -1.72
CGREF1-206ENST00000405600 MUC5ACP98088 5654 aa4.3□□□□□ -1.72
CGREF1-206ENST00000405600 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.29□□□□□ -1.72
CGREF1-206ENST00000405600 KRTAP5-1Q6L8H4 278 aa4.29□□□□□ -1.72
CGREF1-206ENST00000405600 AHNAKQ09666 5890 aaKnown RBP4.26□□□□□ -1.73
CGREF1-206ENST00000405600 LCE1BQ5T7P3 118 aa3.97□□□□□ -1.77
CGREF1-206ENST00000405600 LCE1CQ5T751 118 aa3.85□□□□□ -1.79
CGREF1-206ENST00000405600 PRM1P04553 51 aa3.69□□□□□ -1.82
CGREF1-206ENST00000405600 KRTAP4-4Q9BYR3 166 aa3.56□□□□□ -1.84
CGREF1-206ENST00000405600 KRTAP21-2Q3LI59 83 aa3.22□□□□□ -1.89
CGREF1-206ENST00000405600 PHGR1C9JFL3 82 aa3.11□□□□□ -1.91
CGREF1-206ENST00000405600 MUC19Q7Z5P9 8384 aa2.77□□□□□ -1.97
CGREF1-206ENST00000405600 KRTAP21-1Q3LI58 79 aa2.32□□□□□ -2.04
CGREF1-206ENST00000405600 MUC16Q8WXI7 14507 aa1.96□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 159.7 ms