RNA–Protein interactions for RNA: ENST00000404694.3

CGREF1-205, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CGREF1, Length 1,376 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-205ENST00000404694 KRTAP23-1A1A580 65 aa6.41□□□□□ -1.38
CGREF1-205ENST00000404694 PP632Q6XCG6 107 aa6.41□□□□□ -1.38
CGREF1-205ENST00000404694 SPRR2DP22532 72 aa6.33□□□□□ -1.4
CGREF1-205ENST00000404694 KRTAP2-2Q9BYT5 123 aa6.22□□□□□ -1.41
CGREF1-205ENST00000404694 KRTAP2-1Q9BYU5 128 aa6.22□□□□□ -1.41
CGREF1-205ENST00000404694 GPR98Q8WXG9 6306 aa6.19□□□□□ -1.42
CGREF1-205ENST00000404694 LCE3AQ5TA76 89 aa6.19□□□□□ -1.42
CGREF1-205ENST00000404694 KRTAP19-7Q3SYF9 63 aa6.18□□□□□ -1.42
CGREF1-205ENST00000404694 LCE3BQ5TA77 95 aa6.15□□□□□ -1.43
CGREF1-205ENST00000404694 MT1EP04732 61 aa6.12□□□□□ -1.43
CGREF1-205ENST00000404694 LCE5AQ5TCM9 118 aa6.07□□□□□ -1.44
CGREF1-205ENST00000404694 KRTAP19-3Q7Z4W3 81 aa6.06□□□□□ -1.44
CGREF1-205ENST00000404694 KRTAP19-5Q3LI72 72 aa6.04□□□□□ -1.44
CGREF1-205ENST00000404694 KRTAP12-3P60328 96 aa6□□□□□ -1.45
CGREF1-205ENST00000404694 DSTQ03001 7570 aaKnown RBP5.93□□□□□ -1.46
CGREF1-205ENST00000404694 MT1GP13640 62 aa5.91□□□□□ -1.46
CGREF1-205ENST00000404694 KRTAP15-1Q3LI76 137 aa5.87□□□□□ -1.47
CGREF1-205ENST00000404694 MT1LQ93083 61 aa5.86□□□□□ -1.47
CGREF1-205ENST00000404694 KRTAP19-4Q3LI73 84 aa5.82□□□□□ -1.48
CGREF1-205ENST00000404694 MT1MQ8N339 61 aa5.82□□□□□ -1.48
CGREF1-205ENST00000404694 KRTAP4-9Q9BYQ8 210 aa5.7□□□□□ -1.5
CGREF1-205ENST00000404694 KRTAP4-3Q9BYR4 195 aa5.68□□□□□ -1.5
CGREF1-205ENST00000404694 SPRR5A0A1B0GTR4 108 aa5.62□□□□□ -1.51
CGREF1-205ENST00000404694 LCE3CQ5T5A8 94 aa5.6□□□□□ -1.51
CGREF1-205ENST00000404694 LCE1DQ5T752 114 aa5.59□□□□□ -1.51
CGREF1-205ENST00000404694 LCE4AQ5TA78 99 aa5.59□□□□□ -1.51
CGREF1-205ENST00000404694 KRTAP4-7Q9BYR0 210 aa5.58□□□□□ -1.52
CGREF1-205ENST00000404694 MT4P47944 62 aa5.53□□□□□ -1.52
CGREF1-205ENST00000404694 KRTAP5-4Q6L8H1 288 aa5.52□□□□□ -1.53
CGREF1-205ENST00000404694 HMCN1Q96RW7 5635 aa5.51□□□□□ -1.53
CGREF1-205ENST00000404694 LUZP6Q538Z0 58 aa5.49□□□□□ -1.53
CGREF1-205ENST00000404694 KRTAP5-10Q6L8G5 202 aa5.4□□□□□ -1.55
CGREF1-205ENST00000404694 KRTAP4-6Q9BYQ5 205 aa5.39□□□□□ -1.55
CGREF1-205ENST00000404694 AHNAK2Q8IVF2 5795 aa5.37□□□□□ -1.55
CGREF1-205ENST00000404694 KRTAP5-5Q701N2 237 aaPredicted RBP5.34□□□□□ -1.55
CGREF1-205ENST00000404694 KRTAP5-7Q6L8G8 165 aa5.29□□□□□ -1.56
CGREF1-205ENST00000404694 LOC100996750A0A140TA64 210 aa5.29□□□□□ -1.56
CGREF1-205ENST00000404694 NDUFAF8A1L188 74 aa5.28□□□□□ -1.56
CGREF1-205ENST00000404694 KRTAP9-6A8MVA2 160 aa5.2□□□□□ -1.58
CGREF1-205ENST00000404694 KRTAP20-2Q3LI61 65 aa5.2□□□□□ -1.58
CGREF1-205ENST00000404694 KRTAP12-4P60329 112 aa5.16□□□□□ -1.58
CGREF1-205ENST00000404694 SYNE1Q8NF91 8797 aaKnown RBP5.12□□□□□ -1.59
CGREF1-205ENST00000404694 KRTAP5-3Q6L8H2 238 aa5.05□□□□□ -1.6
CGREF1-205ENST00000404694 MT1AP04731 61 aa4.99□□□□□ -1.61
CGREF1-205ENST00000404694 KRTAP6-1Q3LI64 71 aa4.95□□□□□ -1.62
CGREF1-205ENST00000404694 KRTAP5-2Q701N4 177 aa4.86□□□□□ -1.63
CGREF1-205ENST00000404694 KRTAP9-4Q9BYQ2 154 aa4.8□□□□□ -1.64
CGREF1-205ENST00000404694 A0A0A0MQY5 61 aa4.73□□□□□ -1.65
CGREF1-205ENST00000404694 KRTAP6-2Q3LI66 62 aa4.72□□□□□ -1.65
CGREF1-205ENST00000404694 KRTAP4-11Q9BYQ6 195 aa4.72□□□□□ -1.65
CGREF1-205ENST00000404694 AHNAKQ09666 5890 aaKnown RBP4.71□□□□□ -1.65
CGREF1-205ENST00000404694 H3BS24 57 aa4.63□□□□□ -1.67
CGREF1-205ENST00000404694 MUC5ACP98088 5654 aa4.59□□□□□ -1.67
CGREF1-205ENST00000404694 KRTAP5-8O75690 187 aa4.57□□□□□ -1.68
CGREF1-205ENST00000404694 MUC5BQ9HC84 5762 aaPredicted RBP4.55□□□□□ -1.68
CGREF1-205ENST00000404694 MT3P25713 68 aa4.54□□□□□ -1.68
CGREF1-205ENST00000404694 OBSCNQ5VST9 7968 aa4.54□□□□□ -1.68
CGREF1-205ENST00000404694 INE1O15225 51 aa4.45□□□□□ -1.7
CGREF1-205ENST00000404694 KRTAP5-1Q6L8H4 278 aa4.33□□□□□ -1.72
CGREF1-205ENST00000404694 KRTAP9-9Q9BYP9 154 aa4.3□□□□□ -1.72
CGREF1-205ENST00000404694 LCE3DQ9BYE3 92 aa4.2□□□□□ -1.74
CGREF1-205ENST00000404694 LCE1EQ5T753 118 aa4.16□□□□□ -1.74
CGREF1-205ENST00000404694 LCE3EQ5T5B0 92 aa4.1□□□□□ -1.75
CGREF1-205ENST00000404694 KRTAP4-2Q9BYR5 136 aa3.94□□□□□ -1.78
CGREF1-205ENST00000404694 LCE1BQ5T7P3 118 aa3.91□□□□□ -1.78
CGREF1-205ENST00000404694 LCE1CQ5T751 118 aa3.87□□□□□ -1.79
CGREF1-205ENST00000404694 KRTAP4-12Q9BQ66 201 aa3.65□□□□□ -1.82
CGREF1-205ENST00000404694 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.54□□□□□ -1.84
CGREF1-205ENST00000404694 PRM1P04553 51 aa3.52□□□□□ -1.85
CGREF1-205ENST00000404694 KRTAP5-11Q6L8G4 156 aa3.51□□□□□ -1.85
CGREF1-205ENST00000404694 LCE1FQ5T754 118 aa3.38□□□□□ -1.87
CGREF1-205ENST00000404694 KRTAP21-2Q3LI59 83 aa3.26□□□□□ -1.89
CGREF1-205ENST00000404694 PHGR1C9JFL3 82 aa3.21□□□□□ -1.9
CGREF1-205ENST00000404694 KRTAP4-4Q9BYR3 166 aa2.98□□□□□ -1.93
CGREF1-205ENST00000404694 MUC19Q7Z5P9 8384 aa2.79□□□□□ -1.96
CGREF1-205ENST00000404694 KRTAP21-1Q3LI58 79 aa2.4□□□□□ -2.02
CGREF1-205ENST00000404694 MUC16Q8WXI7 14507 aa1.95□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 160.3 ms