RNA–Protein interactions for RNA: ENST00000400911.7

VAMP1-203, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 1,068 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-203ENST00000400911 CAMK2N1Q7Z7J9 78 aa5.33□□□□□ -1.56
VAMP1-203ENST00000400911 UQCR11O14957 56 aa5.32□□□□□ -1.56
VAMP1-203ENST00000400911 SPATA8Q6RVD6 105 aa5.31□□□□□ -1.56
VAMP1-203ENST00000400911 MT1GP13640 62 aa5.29□□□□□ -1.56
VAMP1-203ENST00000400911 KRTAP5-10Q6L8G5 202 aa5.28□□□□□ -1.56
VAMP1-203ENST00000400911 A0A0D9SG42 100 aa5.27□□□□□ -1.57
VAMP1-203ENST00000400911 KRTAP13-4Q3LI77 160 aa5.27□□□□□ -1.57
VAMP1-203ENST00000400911 KRTAP19-5Q3LI72 72 aa5.24□□□□□ -1.57
VAMP1-203ENST00000400911 PP632Q6XCG6 107 aa5.24□□□□□ -1.57
VAMP1-203ENST00000400911 A6NED7 52 aa5.22□□□□□ -1.57
VAMP1-203ENST00000400911 MIR22HGQ0VDD5 57 aa5.22□□□□□ -1.57
VAMP1-203ENST00000400911 KRTAP19-4Q3LI73 84 aa5.21□□□□□ -1.58
VAMP1-203ENST00000400911 MT1MQ8N339 61 aa5.2□□□□□ -1.58
VAMP1-203ENST00000400911 SPINT4Q6UDR6 99 aa5.19□□□□□ -1.58
VAMP1-203ENST00000400911 KRTAP5-4Q6L8H1 288 aa5.18□□□□□ -1.58
VAMP1-203ENST00000400911 A8MU10 97 aa5.17□□□□□ -1.58
VAMP1-203ENST00000400911 K7ERS5 55 aa5.14□□□□□ -1.59
VAMP1-203ENST00000400911 MT1LQ93083 61 aa5.13□□□□□ -1.59
VAMP1-203ENST00000400911 KRTAP4-3Q9BYR4 195 aa5.13□□□□□ -1.59
VAMP1-203ENST00000400911 KRTAP5-7Q6L8G8 165 aa5.12□□□□□ -1.59
VAMP1-203ENST00000400911 KRTAP12-1P59990 96 aa5.1□□□□□ -1.59
VAMP1-203ENST00000400911 KRTAP5-3Q6L8H2 238 aa5.07□□□□□ -1.6
VAMP1-203ENST00000400911 KRTAP4-7Q9BYR0 210 aa5.04□□□□□ -1.6
VAMP1-203ENST00000400911 CDC42SE1Q9NRR8 79 aa5.04□□□□□ -1.6
VAMP1-203ENST00000400911 BRK1Q8WUW1 75 aa4.96□□□□□ -1.62
VAMP1-203ENST00000400911 C10orf95Q9H7T3 257 aa4.96□□□□□ -1.62
VAMP1-203ENST00000400911 SPRR5A0A1B0GTR4 108 aa4.93□□□□□ -1.62
VAMP1-203ENST00000400911 KRTAP20-2Q3LI61 65 aa4.93□□□□□ -1.62
VAMP1-203ENST00000400911 LCE3AQ5TA76 89 aa4.92□□□□□ -1.62
VAMP1-203ENST00000400911 TNP1P09430 55 aa4.84□□□□□ -1.63
VAMP1-203ENST00000400911 KRTAP4-2Q9BYR5 136 aa4.84□□□□□ -1.63
VAMP1-203ENST00000400911 KRTAP4-11Q9BYQ6 195 aa4.83□□□□□ -1.64
VAMP1-203ENST00000400911 KRTAP5-5Q701N2 237 aaPredicted RBP4.81□□□□□ -1.64
VAMP1-203ENST00000400911 KRTAP12-4P60329 112 aa4.79□□□□□ -1.64
VAMP1-203ENST00000400911 ROMO1P60602 79 aa4.77□□□□□ -1.65
VAMP1-203ENST00000400911 KRTAP25-1Q3LHN0 102 aa4.75□□□□□ -1.65
VAMP1-203ENST00000400911 KRTAP12-3P60328 96 aa4.73□□□□□ -1.65
VAMP1-203ENST00000400911 SYNE1Q8NF91 8797 aaKnown RBP4.72□□□□□ -1.65
VAMP1-203ENST00000400911 PMAIP1Q13794 54 aa4.7□□□□□ -1.66
VAMP1-203ENST00000400911 PRO0628Q9UI54 55 aa4.69□□□□□ -1.66
VAMP1-203ENST00000400911 KRTAP23-1A1A580 65 aa4.57□□□□□ -1.68
VAMP1-203ENST00000400911 AHNAKQ09666 5890 aaKnown RBP4.51□□□□□ -1.69
VAMP1-203ENST00000400911 MUC5ACP98088 5654 aa4.5□□□□□ -1.69
VAMP1-203ENST00000400911 MUC5BQ9HC84 5762 aaPredicted RBP4.48□□□□□ -1.69
VAMP1-203ENST00000400911 KRTAP5-2Q701N4 177 aa4.47□□□□□ -1.69
VAMP1-203ENST00000400911 KRTAP5-8O75690 187 aa4.45□□□□□ -1.7
VAMP1-203ENST00000400911 KRTAP6-1Q3LI64 71 aa4.38□□□□□ -1.71
VAMP1-203ENST00000400911 KTN1-AS1Q86SY8 53 aa4.38□□□□□ -1.71
VAMP1-203ENST00000400911 MT1AP04731 61 aa4.34□□□□□ -1.71
VAMP1-203ENST00000400911 PRAC1Q96KF2 57 aa4.34□□□□□ -1.71
VAMP1-203ENST00000400911 KRTAP15-1Q3LI76 137 aa4.33□□□□□ -1.72
VAMP1-203ENST00000400911 LCE3CQ5T5A8 94 aa4.32□□□□□ -1.72
VAMP1-203ENST00000400911 OBSCNQ5VST9 7968 aa4.28□□□□□ -1.72
VAMP1-203ENST00000400911 KRTAP6-2Q3LI66 62 aa4.26□□□□□ -1.73
VAMP1-203ENST00000400911 SVIPQ8NHG7 77 aa4.21□□□□□ -1.74
VAMP1-203ENST00000400911 KRTAP9-6A8MVA2 160 aa4.1□□□□□ -1.75
VAMP1-203ENST00000400911 KRTAP5-1Q6L8H4 278 aa4.1□□□□□ -1.75
VAMP1-203ENST00000400911 MT3P25713 68 aa4□□□□□ -1.77
VAMP1-203ENST00000400911 LCE1EQ5T753 118 aa3.76□□□□□ -1.81
VAMP1-203ENST00000400911 LUZP6Q538Z0 58 aa3.74□□□□□ -1.81
VAMP1-203ENST00000400911 LCE1BQ5T7P3 118 aa3.61□□□□□ -1.83
VAMP1-203ENST00000400911 A0A0A0MQY5 61 aa3.55□□□□□ -1.84
VAMP1-203ENST00000400911 LCE1CQ5T751 118 aa3.5□□□□□ -1.85
VAMP1-203ENST00000400911 NDUFAF8A1L188 74 aa3.36□□□□□ -1.87
VAMP1-203ENST00000400911 KRTAP5-11Q6L8G4 156 aa3.27□□□□□ -1.89
VAMP1-203ENST00000400911 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.21□□□□□ -1.9
VAMP1-203ENST00000400911 LCE1FQ5T754 118 aa3.19□□□□□ -1.9
VAMP1-203ENST00000400911 PHGR1C9JFL3 82 aa3.1□□□□□ -1.91
VAMP1-203ENST00000400911 LCE3DQ9BYE3 92 aa3.09□□□□□ -1.91
VAMP1-203ENST00000400911 LCE3EQ5T5B0 92 aa2.98□□□□□ -1.93
VAMP1-203ENST00000400911 KRTAP21-2Q3LI59 83 aa2.88□□□□□ -1.95
VAMP1-203ENST00000400911 INE1O15225 51 aa2.81□□□□□ -1.96
VAMP1-203ENST00000400911 KRTAP4-4Q9BYR3 166 aa2.73□□□□□ -1.97
VAMP1-203ENST00000400911 MUC19Q7Z5P9 8384 aa2.67□□□□□ -1.98
VAMP1-203ENST00000400911 PRM1P04553 51 aa2.45□□□□□ -2.02
VAMP1-203ENST00000400911 KRTAP21-1Q3LI58 79 aa2.35□□□□□ -2.03
VAMP1-203ENST00000400911 MUC16Q8WXI7 14507 aa1.9□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 104.2 ms