RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 KRTAP19-7Q3SYF9 63 aa6.62□□□□□ -1.35
CTNS-203ENST00000399306 CDC42SE1Q9NRR8 79 aa6.62□□□□□ -1.35
CTNS-203ENST00000399306 KRTAP19-4Q3LI73 84 aa6.6□□□□□ -1.35
CTNS-203ENST00000399306 KRTAP25-1Q3LHN0 102 aa6.59□□□□□ -1.35
CTNS-203ENST00000399306 MT1EP04732 61 aa6.55□□□□□ -1.36
CTNS-203ENST00000399306 LCE5AQ5TCM9 118 aa6.55□□□□□ -1.36
CTNS-203ENST00000399306 LCE3AQ5TA76 89 aa6.54□□□□□ -1.36
CTNS-203ENST00000399306 KRTAP19-5Q3LI72 72 aa6.51□□□□□ -1.37
CTNS-203ENST00000399306 KRTAP20-1Q3LI63 56 aa6.49□□□□□ -1.37
CTNS-203ENST00000399306 KRTAP2-3P0C7H8 128 aa6.46□□□□□ -1.38
CTNS-203ENST00000399306 KRTAP2-4Q9BYR9 128 aa6.46□□□□□ -1.38
CTNS-203ENST00000399306 SPRR2DP22532 72 aa6.45□□□□□ -1.38
CTNS-203ENST00000399306 KRTAP23-1A1A580 65 aa6.44□□□□□ -1.38
CTNS-203ENST00000399306 KRTAP19-3Q7Z4W3 81 aa6.44□□□□□ -1.38
CTNS-203ENST00000399306 ROMO1P60602 79 aa6.39□□□□□ -1.39
CTNS-203ENST00000399306 MT1GP13640 62 aa6.35□□□□□ -1.39
CTNS-203ENST00000399306 KRTAP12-3P60328 96 aa6.33□□□□□ -1.4
CTNS-203ENST00000399306 MT1LQ93083 61 aa6.31□□□□□ -1.4
CTNS-203ENST00000399306 PP632Q6XCG6 107 aa6.3□□□□□ -1.4
CTNS-203ENST00000399306 KRTAP2-2Q9BYT5 123 aa6.27□□□□□ -1.41
CTNS-203ENST00000399306 KRTAP2-1Q9BYU5 128 aa6.27□□□□□ -1.41
CTNS-203ENST00000399306 KRTAP5-3Q6L8H2 238 aa6.24□□□□□ -1.41
CTNS-203ENST00000399306 BRK1Q8WUW1 75 aa6.21□□□□□ -1.42
CTNS-203ENST00000399306 MT1MQ8N339 61 aa6.2□□□□□ -1.42
CTNS-203ENST00000399306 DSTQ03001 7570 aaKnown RBP6.2□□□□□ -1.42
CTNS-203ENST00000399306 H3BS24 57 aa6.13□□□□□ -1.43
CTNS-203ENST00000399306 KRTAP15-1Q3LI76 137 aa6.06□□□□□ -1.44
CTNS-203ENST00000399306 KRTAP4-3Q9BYR4 195 aa5.95□□□□□ -1.46
CTNS-203ENST00000399306 PMAIP1Q13794 54 aa5.88□□□□□ -1.47
CTNS-203ENST00000399306 LCE3CQ5T5A8 94 aa5.87□□□□□ -1.47
CTNS-203ENST00000399306 PRO0628Q9UI54 55 aa5.79□□□□□ -1.48
CTNS-203ENST00000399306 KRTAP5-4Q6L8H1 288 aa5.76□□□□□ -1.49
CTNS-203ENST00000399306 KRTAP5-5Q701N2 237 aaPredicted RBP5.69□□□□□ -1.5
CTNS-203ENST00000399306 HMCN1Q96RW7 5635 aa5.59□□□□□ -1.51
CTNS-203ENST00000399306 MT4P47944 62 aa5.56□□□□□ -1.52
CTNS-203ENST00000399306 PRAC1Q96KF2 57 aa5.5□□□□□ -1.53
CTNS-203ENST00000399306 KRTAP9-6A8MVA2 160 aa5.48□□□□□ -1.53
CTNS-203ENST00000399306 KRTAP12-4P60329 112 aa5.46□□□□□ -1.54
CTNS-203ENST00000399306 SPRR5A0A1B0GTR4 108 aa5.45□□□□□ -1.54
CTNS-203ENST00000399306 KTN1-AS1Q86SY8 53 aa5.44□□□□□ -1.54
CTNS-203ENST00000399306 MT1AP04731 61 aa5.4□□□□□ -1.54
CTNS-203ENST00000399306 SYNE1Q8NF91 8797 aaKnown RBP5.39□□□□□ -1.55
CTNS-203ENST00000399306 KRTAP20-2Q3LI61 65 aa5.37□□□□□ -1.55
CTNS-203ENST00000399306 GPR98Q8WXG9 6306 aa5.3□□□□□ -1.56
CTNS-203ENST00000399306 KRTAP6-1Q3LI64 71 aa5.29□□□□□ -1.56
CTNS-203ENST00000399306 AHNAK2Q8IVF2 5795 aa5.28□□□□□ -1.56
CTNS-203ENST00000399306 SVIPQ8NHG7 77 aa5.18□□□□□ -1.58
CTNS-203ENST00000399306 KRTAP5-2Q701N4 177 aa5.11□□□□□ -1.59
CTNS-203ENST00000399306 KRTAP5-10Q6L8G5 202 aa5.07□□□□□ -1.6
CTNS-203ENST00000399306 KRTAP6-2Q3LI66 62 aa4.98□□□□□ -1.61
CTNS-203ENST00000399306 MT3P25713 68 aa4.95□□□□□ -1.62
CTNS-203ENST00000399306 KRTAP5-7Q6L8G8 165 aa4.86□□□□□ -1.63
CTNS-203ENST00000399306 OBSCNQ5VST9 7968 aa4.71□□□□□ -1.66
CTNS-203ENST00000399306 LUZP6Q538Z0 58 aa4.7□□□□□ -1.66
CTNS-203ENST00000399306 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.7□□□□□ -1.66
CTNS-203ENST00000399306 KRTAP5-8O75690 187 aa4.65□□□□□ -1.67
CTNS-203ENST00000399306 KRTAP5-11Q6L8G4 156 aa4.57□□□□□ -1.68
CTNS-203ENST00000399306 LCE1EQ5T753 118 aa4.5□□□□□ -1.69
CTNS-203ENST00000399306 KRTAP5-1Q6L8H4 278 aa4.49□□□□□ -1.69
CTNS-203ENST00000399306 MUC5ACP98088 5654 aa4.45□□□□□ -1.7
CTNS-203ENST00000399306 MUC5BQ9HC84 5762 aaPredicted RBP4.32□□□□□ -1.72
CTNS-203ENST00000399306 LCE3DQ9BYE3 92 aa4.31□□□□□ -1.72
CTNS-203ENST00000399306 AHNAKQ09666 5890 aaKnown RBP4.26□□□□□ -1.73
CTNS-203ENST00000399306 LCE1CQ5T751 118 aa4.16□□□□□ -1.74
CTNS-203ENST00000399306 LCE1BQ5T7P3 118 aa4.16□□□□□ -1.74
CTNS-203ENST00000399306 LCE3EQ5T5B0 92 aa4.12□□□□□ -1.75
CTNS-203ENST00000399306 NDUFAF8A1L188 74 aa4.03□□□□□ -1.76
CTNS-203ENST00000399306 KRTAP4-4Q9BYR3 166 aa3.89□□□□□ -1.79
CTNS-203ENST00000399306 LCE1FQ5T754 118 aa3.59□□□□□ -1.83
CTNS-203ENST00000399306 KRTAP21-2Q3LI59 83 aa3.51□□□□□ -1.85
CTNS-203ENST00000399306 A0A0A0MQY5 61 aa3.43□□□□□ -1.86
CTNS-203ENST00000399306 INE1O15225 51 aa3.41□□□□□ -1.86
CTNS-203ENST00000399306 PRM1P04553 51 aa3.24□□□□□ -1.89
CTNS-203ENST00000399306 PHGR1C9JFL3 82 aa3.19□□□□□ -1.9
CTNS-203ENST00000399306 MUC19Q7Z5P9 8384 aa2.87□□□□□ -1.95
CTNS-203ENST00000399306 KRTAP21-1Q3LI58 79 aa2.26□□□□□ -2.05
CTNS-203ENST00000399306 MUC16Q8WXI7 14507 aa2.07□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 6.3 ms