RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 KRTAP19-4Q3LI73 84 aa9.79□□□□□ -0.84
U2AF1-203ENST00000398137 TNP1P09430 55 aa9.72□□□□□ -0.85
U2AF1-203ENST00000398137 CDC42SE1Q9NRR8 79 aa9.69□□□□□ -0.86
U2AF1-203ENST00000398137 LCE4AQ5TA78 99 aa9.53□□□□□ -0.88
U2AF1-203ENST00000398137 LCE3AQ5TA76 89 aa9.51□□□□□ -0.89
U2AF1-203ENST00000398137 KRTAP19-7Q3SYF9 63 aa9.48□□□□□ -0.89
U2AF1-203ENST00000398137 LCE1DQ5T752 114 aa9.47□□□□□ -0.89
U2AF1-203ENST00000398137 KRTAP25-1Q3LHN0 102 aa9.46□□□□□ -0.9
U2AF1-203ENST00000398137 KRTAP19-5Q3LI72 72 aa9.42□□□□□ -0.9
U2AF1-203ENST00000398137 MT1EP04732 61 aa9.38□□□□□ -0.91
U2AF1-203ENST00000398137 LCE5AQ5TCM9 118 aa9.34□□□□□ -0.91
U2AF1-203ENST00000398137 ROMO1P60602 79 aa9.32□□□□□ -0.92
U2AF1-203ENST00000398137 BRK1Q8WUW1 75 aa9.29□□□□□ -0.92
U2AF1-203ENST00000398137 KRTAP4-7Q9BYR0 210 aa9.29□□□□□ -0.92
U2AF1-203ENST00000398137 DSTQ03001 7570 aaKnown RBP9.27□□□□□ -0.93
U2AF1-203ENST00000398137 KRTAP19-3Q7Z4W3 81 aa9.26□□□□□ -0.93
U2AF1-203ENST00000398137 KRTAP4-9Q9BYQ8 210 aa9.17□□□□□ -0.94
U2AF1-203ENST00000398137 KRTAP12-3P60328 96 aa9.13□□□□□ -0.95
U2AF1-203ENST00000398137 KRTAP23-1A1A580 65 aa9.08□□□□□ -0.96
U2AF1-203ENST00000398137 MT1LQ93083 61 aa9.07□□□□□ -0.96
U2AF1-203ENST00000398137 MT1GP13640 62 aa9□□□□□ -0.97
U2AF1-203ENST00000398137 PP632Q6XCG6 107 aa8.92□□□□□ -0.98
U2AF1-203ENST00000398137 MT1MQ8N339 61 aa8.9□□□□□ -0.98
U2AF1-203ENST00000398137 KRTAP4-11Q9BYQ6 195 aa8.9□□□□□ -0.98
U2AF1-203ENST00000398137 KRTAP4-2Q9BYR5 136 aa8.88□□□□□ -0.99
U2AF1-203ENST00000398137 GPR98Q8WXG9 6306 aa8.86□□□□□ -0.99
U2AF1-203ENST00000398137 KRTAP4-3Q9BYR4 195 aa8.75□□□□□ -1.01
U2AF1-203ENST00000398137 PMAIP1Q13794 54 aa8.73□□□□□ -1.01
U2AF1-203ENST00000398137 KRTAP15-1Q3LI76 137 aa8.72□□□□□ -1.01
U2AF1-203ENST00000398137 MT4P47944 62 aa8.65□□□□□ -1.02
U2AF1-203ENST00000398137 HMCN1Q96RW7 5635 aa8.63□□□□□ -1.03
U2AF1-203ENST00000398137 KRTAP5-4Q6L8H1 288 aa8.6□□□□□ -1.03
U2AF1-203ENST00000398137 PRO0628Q9UI54 55 aa8.6□□□□□ -1.03
U2AF1-203ENST00000398137 LCE3CQ5T5A8 94 aa8.46□□□□□ -1.06
U2AF1-203ENST00000398137 AHNAK2Q8IVF2 5795 aa8.41□□□□□ -1.06
U2AF1-203ENST00000398137 PRAC1Q96KF2 57 aa8.34□□□□□ -1.07
U2AF1-203ENST00000398137 KRTAP5-10Q6L8G5 202 aa8.26□□□□□ -1.09
U2AF1-203ENST00000398137 KRTAP5-5Q701N2 237 aaPredicted RBP8.22□□□□□ -1.09
U2AF1-203ENST00000398137 KRTAP20-2Q3LI61 65 aa8.1□□□□□ -1.11
U2AF1-203ENST00000398137 KTN1-AS1Q86SY8 53 aa8.1□□□□□ -1.11
U2AF1-203ENST00000398137 KRTAP5-3Q6L8H2 238 aa8.03□□□□□ -1.12
U2AF1-203ENST00000398137 SPRR5A0A1B0GTR4 108 aa8□□□□□ -1.13
U2AF1-203ENST00000398137 KRTAP9-6A8MVA2 160 aa7.99□□□□□ -1.13
U2AF1-203ENST00000398137 SYNE1Q8NF91 8797 aaKnown RBP7.94□□□□□ -1.14
U2AF1-203ENST00000398137 KRTAP5-7Q6L8G8 165 aa7.93□□□□□ -1.14
U2AF1-203ENST00000398137 KRTAP12-4P60329 112 aa7.9□□□□□ -1.14
U2AF1-203ENST00000398137 SVIPQ8NHG7 77 aa7.74□□□□□ -1.17
U2AF1-203ENST00000398137 MT1AP04731 61 aa7.72□□□□□ -1.17
U2AF1-203ENST00000398137 KRTAP6-1Q3LI64 71 aa7.65□□□□□ -1.18
U2AF1-203ENST00000398137 KRTAP5-2Q701N4 177 aa7.52□□□□□ -1.21
U2AF1-203ENST00000398137 KRTAP6-2Q3LI66 62 aa7.22□□□□□ -1.25
U2AF1-203ENST00000398137 KRTAP5-8O75690 187 aa7.21□□□□□ -1.26
U2AF1-203ENST00000398137 OBSCNQ5VST9 7968 aa7.08□□□□□ -1.28
U2AF1-203ENST00000398137 MT3P25713 68 aa7.01□□□□□ -1.29
U2AF1-203ENST00000398137 MUC5ACP98088 5654 aa6.9□□□□□ -1.3
U2AF1-203ENST00000398137 AHNAKQ09666 5890 aaKnown RBP6.88□□□□□ -1.31
U2AF1-203ENST00000398137 MUC5BQ9HC84 5762 aaPredicted RBP6.88□□□□□ -1.31
U2AF1-203ENST00000398137 LUZP6Q538Z0 58 aa6.87□□□□□ -1.31
U2AF1-203ENST00000398137 KRTAP5-1Q6L8H4 278 aa6.77□□□□□ -1.33
U2AF1-203ENST00000398137 A0A0A0MQY5 61 aa6.44□□□□□ -1.38
U2AF1-203ENST00000398137 LCE1EQ5T753 118 aa6.36□□□□□ -1.39
U2AF1-203ENST00000398137 LCE3DQ9BYE3 92 aa6.21□□□□□ -1.42
U2AF1-203ENST00000398137 NDUFAF8A1L188 74 aa6.13□□□□□ -1.43
U2AF1-203ENST00000398137 LCE1BQ5T7P3 118 aa5.99□□□□□ -1.45
U2AF1-203ENST00000398137 KRTAP5-11Q6L8G4 156 aa5.99□□□□□ -1.45
U2AF1-203ENST00000398137 LCE3EQ5T5B0 92 aa5.94□□□□□ -1.46
U2AF1-203ENST00000398137 LCE1CQ5T751 118 aa5.92□□□□□ -1.46
U2AF1-203ENST00000398137 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.87□□□□□ -1.47
U2AF1-203ENST00000398137 LCE1FQ5T754 118 aa5.66□□□□□ -1.5
U2AF1-203ENST00000398137 KRTAP21-2Q3LI59 83 aa5.01□□□□□ -1.61
U2AF1-203ENST00000398137 INE1O15225 51 aa4.97□□□□□ -1.61
U2AF1-203ENST00000398137 KRTAP4-4Q9BYR3 166 aa4.85□□□□□ -1.63
U2AF1-203ENST00000398137 PRM1P04553 51 aa4.83□□□□□ -1.64
U2AF1-203ENST00000398137 PHGR1C9JFL3 82 aa4.76□□□□□ -1.65
U2AF1-203ENST00000398137 MUC19Q7Z5P9 8384 aa4.37□□□□□ -1.71
U2AF1-203ENST00000398137 KRTAP21-1Q3LI58 79 aa3.59□□□□□ -1.83
U2AF1-203ENST00000398137 MUC16Q8WXI7 14507 aa3.12□□□□□ -1.91
Retrieved 77 of 20,778 RNA–protein pairs in 5.5 ms