RNA–Protein interactions for RNA: ENST00000395892.5

CLIC1-209, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLIC1, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-209ENST00000395892 KRTAP10-7P60409 375 aaPredicted RBP5.34□□□□□ -1.55
CLIC1-209ENST00000395892 KRTAP19-6Q3LI70 58 aa5.32□□□□□ -1.56
CLIC1-209ENST00000395892 PP632Q6XCG6 107 aa5.32□□□□□ -1.56
CLIC1-209ENST00000395892 KRTAP10-12P60413 245 aa5.27□□□□□ -1.57
CLIC1-209ENST00000395892 LCE3AQ5TA76 89 aa5.27□□□□□ -1.57
CLIC1-209ENST00000395892 LCE1AQ5T7P2 110 aa5.22□□□□□ -1.57
CLIC1-209ENST00000395892 NEBP20929 6669 aa5.2□□□□□ -1.58
CLIC1-209ENST00000395892 KRTAP8-1Q8IUC2 63 aa5.18□□□□□ -1.58
CLIC1-209ENST00000395892 KRTAP6-3Q3LI67 103 aa5.12□□□□□ -1.59
CLIC1-209ENST00000395892 KRTAP12-3P60328 96 aa5.04□□□□□ -1.6
CLIC1-209ENST00000395892 KRTAP20-1Q3LI63 56 aa5.04□□□□□ -1.6
CLIC1-209ENST00000395892 KRTAP19-5Q3LI72 72 aa5.03□□□□□ -1.6
CLIC1-209ENST00000395892 KMT2DO14686 5537 aa5.02□□□□□ -1.61
CLIC1-209ENST00000395892 KRTAP19-7Q3SYF9 63 aa4.98□□□□□ -1.61
CLIC1-209ENST00000395892 MUC12Q9UKN1 5478 aa4.96□□□□□ -1.61
CLIC1-209ENST00000395892 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.9□□□□□ -1.63
CLIC1-209ENST00000395892 KRTAP2-2Q9BYT5 123 aa4.9□□□□□ -1.63
CLIC1-209ENST00000395892 MT1EP04732 61 aa4.87□□□□□ -1.63
CLIC1-209ENST00000395892 KRTAP5-11Q6L8G4 156 aa4.86□□□□□ -1.63
CLIC1-209ENST00000395892 SPRR5A0A1B0GTR4 108 aa4.83□□□□□ -1.64
CLIC1-209ENST00000395892 MT1LQ93083 61 aa4.78□□□□□ -1.64
CLIC1-209ENST00000395892 KRTAP2-3P0C7H8 128 aa4.74□□□□□ -1.65
CLIC1-209ENST00000395892 KRTAP2-4Q9BYR9 128 aa4.74□□□□□ -1.65
CLIC1-209ENST00000395892 LCE3CQ5T5A8 94 aa4.73□□□□□ -1.65
CLIC1-209ENST00000395892 MDN1Q9NU22 5596 aa4.72□□□□□ -1.65
CLIC1-209ENST00000395892 LCE1EQ5T753 118 aa4.71□□□□□ -1.66
CLIC1-209ENST00000395892 GPR98Q8WXG9 6306 aa4.67□□□□□ -1.66
CLIC1-209ENST00000395892 KRTAP5-9P26371 169 aa4.67□□□□□ -1.66
CLIC1-209ENST00000395892 SPRR2FQ96RM1 72 aa4.66□□□□□ -1.66
CLIC1-209ENST00000395892 KRTAP19-3Q7Z4W3 81 aa4.64□□□□□ -1.67
CLIC1-209ENST00000395892 MT1GP13640 62 aa4.61□□□□□ -1.67
CLIC1-209ENST00000395892 MT1MQ8N339 61 aa4.58□□□□□ -1.68
CLIC1-209ENST00000395892 KRTAP9-6A8MVA2 160 aa4.54□□□□□ -1.68
CLIC1-209ENST00000395892 MT3P25713 68 aa4.54□□□□□ -1.68
CLIC1-209ENST00000395892 KRTAP2-1Q9BYU5 128 aa4.54□□□□□ -1.68
CLIC1-209ENST00000395892 NDUFAF8A1L188 74 aa4.53□□□□□ -1.68
CLIC1-209ENST00000395892 KRTAP4-3Q9BYR4 195 aa4.53□□□□□ -1.68
CLIC1-209ENST00000395892 LUZP6Q538Z0 58 aa4.52□□□□□ -1.69
CLIC1-209ENST00000395892 SPRR2EP22531 72 aa4.42□□□□□ -1.7
CLIC1-209ENST00000395892 SPRR2BP35325 72 aa4.42□□□□□ -1.7
CLIC1-209ENST00000395892 SPRR2AP35326 72 aa4.42□□□□□ -1.7
CLIC1-209ENST00000395892 SPRR2DP22532 72 aa4.25□□□□□ -1.73
CLIC1-209ENST00000395892 KRTAP5-1Q6L8H4 278 aa4.25□□□□□ -1.73
CLIC1-209ENST00000395892 DSTQ03001 7570 aaKnown RBP4.22□□□□□ -1.73
CLIC1-209ENST00000395892 KRTAP5-5Q701N2 237 aaPredicted RBP4.15□□□□□ -1.75
CLIC1-209ENST00000395892 KRTAP5-4Q6L8H1 288 aa4.1□□□□□ -1.75
CLIC1-209ENST00000395892 KRTAP4-4Q9BYR3 166 aa4.07□□□□□ -1.76
CLIC1-209ENST00000395892 MT1AP04731 61 aa4.06□□□□□ -1.76
CLIC1-209ENST00000395892 KRTAP6-1Q3LI64 71 aa4.03□□□□□ -1.76
CLIC1-209ENST00000395892 AHNAK2Q8IVF2 5795 aa4.02□□□□□ -1.77
CLIC1-209ENST00000395892 HMCN1Q96RW7 5635 aa4.01□□□□□ -1.77
CLIC1-209ENST00000395892 KRTAP5-10Q6L8G5 202 aa3.99□□□□□ -1.77
CLIC1-209ENST00000395892 LCE1FQ5T754 118 aa3.98□□□□□ -1.77
CLIC1-209ENST00000395892 KRTAP5-7Q6L8G8 165 aa3.94□□□□□ -1.78
CLIC1-209ENST00000395892 A0A0A0MQY5 61 aa3.91□□□□□ -1.78
CLIC1-209ENST00000395892 SYNE1Q8NF91 8797 aaKnown RBP3.89□□□□□ -1.79
CLIC1-209ENST00000395892 KRTAP12-4P60329 112 aa3.75□□□□□ -1.81
CLIC1-209ENST00000395892 MT4P47944 62 aa3.74□□□□□ -1.81
CLIC1-209ENST00000395892 INE1O15225 51 aa3.73□□□□□ -1.81
CLIC1-209ENST00000395892 KRTAP6-2Q3LI66 62 aa3.69□□□□□ -1.82
CLIC1-209ENST00000395892 OBSCNQ5VST9 7968 aa3.65□□□□□ -1.82
CLIC1-209ENST00000395892 KRTAP20-2Q3LI61 65 aa3.65□□□□□ -1.83
CLIC1-209ENST00000395892 KRTAP5-2Q701N4 177 aa3.59□□□□□ -1.83
CLIC1-209ENST00000395892 AHNAKQ09666 5890 aaKnown RBP3.55□□□□□ -1.84
CLIC1-209ENST00000395892 LCE3DQ9BYE3 92 aa3.53□□□□□ -1.84
CLIC1-209ENST00000395892 MUC5ACP98088 5654 aa3.46□□□□□ -1.86
CLIC1-209ENST00000395892 LCE3EQ5T5B0 92 aa3.45□□□□□ -1.86
CLIC1-209ENST00000395892 MUC5BQ9HC84 5762 aaPredicted RBP3.43□□□□□ -1.86
CLIC1-209ENST00000395892 KRTAP5-8O75690 187 aa3.21□□□□□ -1.9
CLIC1-209ENST00000395892 LCE1CQ5T751 118 aa3.07□□□□□ -1.92
CLIC1-209ENST00000395892 LCE1BQ5T7P3 118 aa3.07□□□□□ -1.92
CLIC1-209ENST00000395892 PRM1P04553 51 aa3.03□□□□□ -1.92
CLIC1-209ENST00000395892 KRTAP21-2Q3LI59 83 aa2.66□□□□□ -1.98
CLIC1-209ENST00000395892 MUC19Q7Z5P9 8384 aa2.48□□□□□ -2.01
CLIC1-209ENST00000395892 PHGR1C9JFL3 82 aa2.34□□□□□ -2.03
CLIC1-209ENST00000395892 KRTAP21-1Q3LI58 79 aa1.91□□□□□ -2.1
CLIC1-209ENST00000395892 MUC16Q8WXI7 14507 aa1.51□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 101.1 ms