RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 K7ERS5 55 aa5.82□□□□□ -1.48
CXCL12-206ENST00000395795 GPR98Q8WXG9 6306 aa5.79□□□□□ -1.48
CXCL12-206ENST00000395795 MT1MQ8N339 61 aa5.77□□□□□ -1.49
CXCL12-206ENST00000395795 MT1LQ93083 61 aa5.77□□□□□ -1.49
CXCL12-206ENST00000395795 CDC42SE1Q9NRR8 79 aa5.75□□□□□ -1.49
CXCL12-206ENST00000395795 LCE1DQ5T752 114 aa5.72□□□□□ -1.49
CXCL12-206ENST00000395795 C10orf95Q9H7T3 257 aa5.71□□□□□ -1.5
CXCL12-206ENST00000395795 LCE3AQ5TA76 89 aa5.7□□□□□ -1.5
CXCL12-206ENST00000395795 PP632Q6XCG6 107 aa5.69□□□□□ -1.5
CXCL12-206ENST00000395795 KRTAP4-3Q9BYR4 195 aa5.69□□□□□ -1.5
CXCL12-206ENST00000395795 LCE4AQ5TA78 99 aa5.65□□□□□ -1.5
CXCL12-206ENST00000395795 TNP1P09430 55 aa5.62□□□□□ -1.51
CXCL12-206ENST00000395795 KRTAP5-4Q6L8H1 288 aa5.62□□□□□ -1.51
CXCL12-206ENST00000395795 MT4P47944 62 aa5.6□□□□□ -1.51
CXCL12-206ENST00000395795 HMCN1Q96RW7 5635 aa5.57□□□□□ -1.52
CXCL12-206ENST00000395795 BRK1Q8WUW1 75 aa5.54□□□□□ -1.52
CXCL12-206ENST00000395795 KRTAP4-7Q9BYR0 210 aa5.52□□□□□ -1.53
CXCL12-206ENST00000395795 KRTAP25-1Q3LHN0 102 aa5.51□□□□□ -1.53
CXCL12-206ENST00000395795 KRTAP4-6Q9BYQ5 205 aa5.51□□□□□ -1.53
CXCL12-206ENST00000395795 ROMO1P60602 79 aa5.48□□□□□ -1.53
CXCL12-206ENST00000395795 SVIPQ8NHG7 77 aa5.46□□□□□ -1.54
CXCL12-206ENST00000395795 AHNAK2Q8IVF2 5795 aa5.45□□□□□ -1.54
CXCL12-206ENST00000395795 KRTAP12-3P60328 96 aa5.44□□□□□ -1.54
CXCL12-206ENST00000395795 KRTAP5-10Q6L8G5 202 aa5.41□□□□□ -1.54
CXCL12-206ENST00000395795 KRTAP5-5Q701N2 237 aaPredicted RBP5.36□□□□□ -1.55
CXCL12-206ENST00000395795 KRTAP23-1A1A580 65 aa5.35□□□□□ -1.55
CXCL12-206ENST00000395795 KRTAP20-2Q3LI61 65 aa5.27□□□□□ -1.57
CXCL12-206ENST00000395795 PMAIP1Q13794 54 aa5.26□□□□□ -1.57
CXCL12-206ENST00000395795 KRTAP5-3Q6L8H2 238 aa5.24□□□□□ -1.57
CXCL12-206ENST00000395795 LOC100996750A0A140TA64 210 aa5.23□□□□□ -1.57
CXCL12-206ENST00000395795 PRO0628Q9UI54 55 aa5.22□□□□□ -1.57
CXCL12-206ENST00000395795 SPRR5A0A1B0GTR4 108 aa5.21□□□□□ -1.58
CXCL12-206ENST00000395795 KRTAP5-7Q6L8G8 165 aa5.19□□□□□ -1.58
CXCL12-206ENST00000395795 SYNE1Q8NF91 8797 aaKnown RBP5.13□□□□□ -1.59
CXCL12-206ENST00000395795 KRTAP12-4P60329 112 aa5.09□□□□□ -1.59
CXCL12-206ENST00000395795 KRTAP19-4Q3LI73 84 aa5.08□□□□□ -1.6
CXCL12-206ENST00000395795 KRTAP15-1Q3LI76 137 aa5.04□□□□□ -1.6
CXCL12-206ENST00000395795 LCE3CQ5T5A8 94 aa5.02□□□□□ -1.61
CXCL12-206ENST00000395795 PRAC1Q96KF2 57 aa4.92□□□□□ -1.62
CXCL12-206ENST00000395795 KRTAP5-2Q701N4 177 aa4.91□□□□□ -1.62
CXCL12-206ENST00000395795 KRTAP6-1Q3LI64 71 aa4.9□□□□□ -1.63
CXCL12-206ENST00000395795 MT1AP04731 61 aa4.89□□□□□ -1.63
CXCL12-206ENST00000395795 KTN1-AS1Q86SY8 53 aa4.89□□□□□ -1.63
CXCL12-206ENST00000395795 KRTAP9-6A8MVA2 160 aa4.86□□□□□ -1.63
CXCL12-206ENST00000395795 KRTAP4-11Q9BYQ6 195 aa4.82□□□□□ -1.64
CXCL12-206ENST00000395795 KRTAP9-4Q9BYQ2 154 aa4.74□□□□□ -1.65
CXCL12-206ENST00000395795 KRTAP5-8O75690 187 aa4.71□□□□□ -1.66
CXCL12-206ENST00000395795 KRTAP6-2Q3LI66 62 aa4.68□□□□□ -1.66
CXCL12-206ENST00000395795 OBSCNQ5VST9 7968 aa4.51□□□□□ -1.69
CXCL12-206ENST00000395795 MUC5ACP98088 5654 aa4.49□□□□□ -1.69
CXCL12-206ENST00000395795 AHNAKQ09666 5890 aaKnown RBP4.47□□□□□ -1.69
CXCL12-206ENST00000395795 MUC5BQ9HC84 5762 aaPredicted RBP4.45□□□□□ -1.7
CXCL12-206ENST00000395795 MT3P25713 68 aa4.43□□□□□ -1.7
CXCL12-206ENST00000395795 KRTAP5-1Q6L8H4 278 aa4.43□□□□□ -1.7
CXCL12-206ENST00000395795 KRTAP9-9Q9BYP9 154 aa4.37□□□□□ -1.71
CXCL12-206ENST00000395795 LUZP6Q538Z0 58 aa4.15□□□□□ -1.75
CXCL12-206ENST00000395795 LCE1EQ5T753 118 aa4.14□□□□□ -1.75
CXCL12-206ENST00000395795 KRTAP4-2Q9BYR5 136 aa3.99□□□□□ -1.77
CXCL12-206ENST00000395795 LCE1BQ5T7P3 118 aa3.86□□□□□ -1.79
CXCL12-206ENST00000395795 LCE1CQ5T751 118 aa3.84□□□□□ -1.79
CXCL12-206ENST00000395795 KRTAP4-12Q9BQ66 201 aa3.74□□□□□ -1.81
CXCL12-206ENST00000395795 NDUFAF8A1L188 74 aa3.71□□□□□ -1.82
CXCL12-206ENST00000395795 H3BS24 57 aa3.68□□□□□ -1.82
CXCL12-206ENST00000395795 LCE3DQ9BYE3 92 aa3.6□□□□□ -1.83
CXCL12-206ENST00000395795 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.52□□□□□ -1.85
CXCL12-206ENST00000395795 KRTAP5-11Q6L8G4 156 aa3.51□□□□□ -1.85
CXCL12-206ENST00000395795 LCE3EQ5T5B0 92 aa3.46□□□□□ -1.86
CXCL12-206ENST00000395795 LCE1FQ5T754 118 aa3.4□□□□□ -1.87
CXCL12-206ENST00000395795 KRTAP21-2Q3LI59 83 aa3.26□□□□□ -1.89
CXCL12-206ENST00000395795 A0A0A0MQY5 61 aa3.2□□□□□ -1.9
CXCL12-206ENST00000395795 INE1O15225 51 aa3.1□□□□□ -1.91
CXCL12-206ENST00000395795 PHGR1C9JFL3 82 aa3.09□□□□□ -1.91
CXCL12-206ENST00000395795 KRTAP4-4Q9BYR3 166 aa2.97□□□□□ -1.93
CXCL12-206ENST00000395795 MUC19Q7Z5P9 8384 aa2.82□□□□□ -1.96
CXCL12-206ENST00000395795 PRM1P04553 51 aa2.81□□□□□ -1.96
CXCL12-206ENST00000395795 KRTAP21-1Q3LI58 79 aa2.33□□□□□ -2.04
CXCL12-206ENST00000395795 MUC16Q8WXI7 14507 aa2.02□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 99.9 ms