RNA–Protein interactions for RNA: ENST00000395363.5

HLA-DQA1-203, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,206 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-203ENST00000395363 KRTAP2-2Q9BYT5 123 aa4.49□□□□□ -1.69
HLA-DQA1-203ENST00000395363 KRTAP2-1Q9BYU5 128 aa4.49□□□□□ -1.69
HLA-DQA1-203ENST00000395363 A0A0D9SG42 100 aa4.46□□□□□ -1.7
HLA-DQA1-203ENST00000395363 SEC61GP60059 68 aa4.46□□□□□ -1.7
HLA-DQA1-203ENST00000395363 CAMK2N1Q7Z7J9 78 aa4.45□□□□□ -1.7
HLA-DQA1-203ENST00000395363 A6NED7 52 aa4.43□□□□□ -1.7
HLA-DQA1-203ENST00000395363 SPATA8Q6RVD6 105 aa4.43□□□□□ -1.7
HLA-DQA1-203ENST00000395363 CDC42SE1Q9NRR8 79 aa4.42□□□□□ -1.7
HLA-DQA1-203ENST00000395363 A0A1B0GU69 56 aa4.4□□□□□ -1.71
HLA-DQA1-203ENST00000395363 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.39□□□□□ -1.71
HLA-DQA1-203ENST00000395363 KRTAP19-7Q3SYF9 63 aa4.38□□□□□ -1.71
HLA-DQA1-203ENST00000395363 A0A1B0GU33 70 aa4.35□□□□□ -1.71
HLA-DQA1-203ENST00000395363 NDUFAF8A1L188 74 aa4.35□□□□□ -1.71
HLA-DQA1-203ENST00000395363 SPINT4Q6UDR6 99 aa4.35□□□□□ -1.71
HLA-DQA1-203ENST00000395363 UQCR11O14957 56 aa4.34□□□□□ -1.71
HLA-DQA1-203ENST00000395363 MT1EP04732 61 aa4.34□□□□□ -1.71
HLA-DQA1-203ENST00000395363 PMAIP1Q13794 54 aa4.33□□□□□ -1.72
HLA-DQA1-203ENST00000395363 KRTAP12-1P59990 96 aa4.32□□□□□ -1.72
HLA-DQA1-203ENST00000395363 A8MU10 97 aa4.28□□□□□ -1.72
HLA-DQA1-203ENST00000395363 MIR22HGQ0VDD5 57 aa4.28□□□□□ -1.72
HLA-DQA1-203ENST00000395363 KRTAP19-5Q3LI72 72 aa4.28□□□□□ -1.72
HLA-DQA1-203ENST00000395363 KRTAP19-3Q7Z4W3 81 aa4.28□□□□□ -1.72
HLA-DQA1-203ENST00000395363 DSTQ03001 7570 aaKnown RBP4.28□□□□□ -1.73
HLA-DQA1-203ENST00000395363 MT3P25713 68 aa4.25□□□□□ -1.73
HLA-DQA1-203ENST00000395363 KTN1-AS1Q86SY8 53 aa4.24□□□□□ -1.73
HLA-DQA1-203ENST00000395363 KRTAP5-11Q6L8G4 156 aa4.23□□□□□ -1.73
HLA-DQA1-203ENST00000395363 LCE3AQ5TA76 89 aa4.17□□□□□ -1.74
HLA-DQA1-203ENST00000395363 C10orf95Q9H7T3 257 aa4.16□□□□□ -1.74
HLA-DQA1-203ENST00000395363 KRTAP4-3Q9BYR4 195 aa4.15□□□□□ -1.75
HLA-DQA1-203ENST00000395363 MT1MQ8N339 61 aa4.14□□□□□ -1.75
HLA-DQA1-203ENST00000395363 MT1LQ93083 61 aa4.14□□□□□ -1.75
HLA-DQA1-203ENST00000395363 K7ERS5 55 aa4.13□□□□□ -1.75
HLA-DQA1-203ENST00000395363 GPR98Q8WXG9 6306 aa4.13□□□□□ -1.75
HLA-DQA1-203ENST00000395363 MT1GP13640 62 aa4.12□□□□□ -1.75
HLA-DQA1-203ENST00000395363 MT4P47944 62 aa4.06□□□□□ -1.76
HLA-DQA1-203ENST00000395363 PP632Q6XCG6 107 aa4.05□□□□□ -1.76
HLA-DQA1-203ENST00000395363 HMCN1Q96RW7 5635 aa4.05□□□□□ -1.76
HLA-DQA1-203ENST00000395363 TNP1P09430 55 aa4.04□□□□□ -1.76
HLA-DQA1-203ENST00000395363 AHNAK2Q8IVF2 5795 aa3.96□□□□□ -1.78
HLA-DQA1-203ENST00000395363 LCE1EQ5T753 118 aa3.95□□□□□ -1.78
HLA-DQA1-203ENST00000395363 KRTAP12-3P60328 96 aa3.94□□□□□ -1.78
HLA-DQA1-203ENST00000395363 ROMO1P60602 79 aa3.93□□□□□ -1.78
HLA-DQA1-203ENST00000395363 KRTAP5-4Q6L8H1 288 aa3.93□□□□□ -1.78
HLA-DQA1-203ENST00000395363 KRTAP25-1Q3LHN0 102 aa3.88□□□□□ -1.79
HLA-DQA1-203ENST00000395363 LCE1FQ5T754 118 aa3.81□□□□□ -1.8
HLA-DQA1-203ENST00000395363 KRTAP5-10Q6L8G5 202 aa3.8□□□□□ -1.8
HLA-DQA1-203ENST00000395363 KRTAP5-5Q701N2 237 aaPredicted RBP3.78□□□□□ -1.8
HLA-DQA1-203ENST00000395363 KRTAP5-1Q6L8H4 278 aa3.77□□□□□ -1.81
HLA-DQA1-203ENST00000395363 KRTAP20-2Q3LI61 65 aa3.75□□□□□ -1.81
HLA-DQA1-203ENST00000395363 SYNE1Q8NF91 8797 aaKnown RBP3.68□□□□□ -1.82
HLA-DQA1-203ENST00000395363 SPRR5A0A1B0GTR4 108 aa3.63□□□□□ -1.83
HLA-DQA1-203ENST00000395363 KRTAP4-4Q9BYR3 166 aa3.63□□□□□ -1.83
HLA-DQA1-203ENST00000395363 KRTAP12-4P60329 112 aa3.62□□□□□ -1.83
HLA-DQA1-203ENST00000395363 LCE3CQ5T5A8 94 aa3.62□□□□□ -1.83
HLA-DQA1-203ENST00000395363 KRTAP5-7Q6L8G8 165 aa3.61□□□□□ -1.83
HLA-DQA1-203ENST00000395363 KRTAP6-1Q3LI64 71 aa3.55□□□□□ -1.84
HLA-DQA1-203ENST00000395363 KRTAP9-6A8MVA2 160 aa3.52□□□□□ -1.85
HLA-DQA1-203ENST00000395363 MT1AP04731 61 aa3.49□□□□□ -1.85
HLA-DQA1-203ENST00000395363 KRTAP5-2Q701N4 177 aa3.44□□□□□ -1.86
HLA-DQA1-203ENST00000395363 KRTAP6-2Q3LI66 62 aa3.38□□□□□ -1.87
HLA-DQA1-203ENST00000395363 LUZP6Q538Z0 58 aa3.32□□□□□ -1.88
HLA-DQA1-203ENST00000395363 OBSCNQ5VST9 7968 aa3.31□□□□□ -1.88
HLA-DQA1-203ENST00000395363 KRTAP5-8O75690 187 aa3.31□□□□□ -1.88
HLA-DQA1-203ENST00000395363 MUC5BQ9HC84 5762 aaPredicted RBP3.24□□□□□ -1.89
HLA-DQA1-203ENST00000395363 LCE3EQ5T5B0 92 aa3.24□□□□□ -1.89
HLA-DQA1-203ENST00000395363 AHNAKQ09666 5890 aaKnown RBP3.23□□□□□ -1.89
HLA-DQA1-203ENST00000395363 MUC5ACP98088 5654 aa3.21□□□□□ -1.9
HLA-DQA1-203ENST00000395363 INE1O15225 51 aa2.86□□□□□ -1.95
HLA-DQA1-203ENST00000395363 LCE1BQ5T7P3 118 aa2.83□□□□□ -1.96
HLA-DQA1-203ENST00000395363 LCE3DQ9BYE3 92 aa2.78□□□□□ -1.96
HLA-DQA1-203ENST00000395363 LCE1CQ5T751 118 aa2.68□□□□□ -1.98
HLA-DQA1-203ENST00000395363 KRTAP21-2Q3LI59 83 aa2.31□□□□□ -2.04
HLA-DQA1-203ENST00000395363 PHGR1C9JFL3 82 aa2.22□□□□□ -2.05
HLA-DQA1-203ENST00000395363 MUC19Q7Z5P9 8384 aa2.16□□□□□ -2.06
HLA-DQA1-203ENST00000395363 PRM1P04553 51 aa2.02□□□□□ -2.09
HLA-DQA1-203ENST00000395363 KRTAP21-1Q3LI58 79 aa1.62□□□□□ -2.15
HLA-DQA1-203ENST00000395363 MUC16Q8WXI7 14507 aa1.41□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 41.5 ms