RNA–Protein interactions for RNA: ENST00000394241.3

TGFA-202, Transcript of transforming growth factor alpha, humanhuman

TSL 3

Gene TGFA, Length 568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFA-202ENST00000394241 KRTAP25-1Q3LHN0 102 aa6.02□□□□□ -1.45
TGFA-202ENST00000394241 KRTAP19-7Q3SYF9 63 aa6.02□□□□□ -1.45
TGFA-202ENST00000394241 LCE3AQ5TA76 89 aa6.02□□□□□ -1.45
TGFA-202ENST00000394241 LCE1DQ5T752 114 aa6□□□□□ -1.45
TGFA-202ENST00000394241 MT1EP04732 61 aa5.97□□□□□ -1.45
TGFA-202ENST00000394241 KRTAP19-5Q3LI72 72 aa5.97□□□□□ -1.45
TGFA-202ENST00000394241 HMCN1Q96RW7 5635 aa5.9□□□□□ -1.46
TGFA-202ENST00000394241 ROMO1P60602 79 aa5.9□□□□□ -1.46
TGFA-202ENST00000394241 KRTAP5-10Q6L8G5 202 aa5.9□□□□□ -1.46
TGFA-202ENST00000394241 AHNAK2Q8IVF2 5795 aa5.89□□□□□ -1.47
TGFA-202ENST00000394241 LCE5AQ5TCM9 118 aa5.87□□□□□ -1.47
TGFA-202ENST00000394241 MT4P47944 62 aa5.85□□□□□ -1.47
TGFA-202ENST00000394241 KRTAP19-3Q7Z4W3 81 aa5.85□□□□□ -1.47
TGFA-202ENST00000394241 BRK1Q8WUW1 75 aa5.84□□□□□ -1.47
TGFA-202ENST00000394241 KRTAP23-1A1A580 65 aa5.8□□□□□ -1.48
TGFA-202ENST00000394241 KRTAP12-3P60328 96 aa5.8□□□□□ -1.48
TGFA-202ENST00000394241 LCE4AQ5TA78 99 aa5.8□□□□□ -1.48
TGFA-202ENST00000394241 KRTAP5-7Q6L8G8 165 aa5.77□□□□□ -1.49
TGFA-202ENST00000394241 MT1LQ93083 61 aa5.75□□□□□ -1.49
TGFA-202ENST00000394241 MT1GP13640 62 aa5.74□□□□□ -1.49
TGFA-202ENST00000394241 PP632Q6XCG6 107 aa5.72□□□□□ -1.49
TGFA-202ENST00000394241 MT1MQ8N339 61 aa5.65□□□□□ -1.5
TGFA-202ENST00000394241 KRTAP5-3Q6L8H2 238 aa5.61□□□□□ -1.51
TGFA-202ENST00000394241 KRTAP4-6Q9BYQ5 205 aa5.61□□□□□ -1.51
TGFA-202ENST00000394241 SPRR5A0A1B0GTR4 108 aa5.59□□□□□ -1.51
TGFA-202ENST00000394241 KRTAP5-4Q6L8H1 288 aa5.57□□□□□ -1.52
TGFA-202ENST00000394241 KRTAP15-1Q3LI76 137 aa5.53□□□□□ -1.52
TGFA-202ENST00000394241 PMAIP1Q13794 54 aa5.49□□□□□ -1.53
TGFA-202ENST00000394241 KRTAP19-4Q3LI73 84 aa5.49□□□□□ -1.53
TGFA-202ENST00000394241 KRTAP4-3Q9BYR4 195 aa5.48□□□□□ -1.53
TGFA-202ENST00000394241 KRTAP4-7Q9BYR0 210 aa5.47□□□□□ -1.53
TGFA-202ENST00000394241 PRO0628Q9UI54 55 aa5.39□□□□□ -1.55
TGFA-202ENST00000394241 LCE3CQ5T5A8 94 aa5.36□□□□□ -1.55
TGFA-202ENST00000394241 KRTAP20-2Q3LI61 65 aa5.31□□□□□ -1.56
TGFA-202ENST00000394241 PRAC1Q96KF2 57 aa5.2□□□□□ -1.58
TGFA-202ENST00000394241 LOC100996750A0A140TA64 210 aa5.16□□□□□ -1.58
TGFA-202ENST00000394241 KRTAP5-5Q701N2 237 aaPredicted RBP5.14□□□□□ -1.59
TGFA-202ENST00000394241 KTN1-AS1Q86SY8 53 aa5.1□□□□□ -1.59
TGFA-202ENST00000394241 KRTAP12-4P60329 112 aa5.09□□□□□ -1.59
TGFA-202ENST00000394241 AHNAKQ09666 5890 aaKnown RBP5.06□□□□□ -1.6
TGFA-202ENST00000394241 KRTAP9-6A8MVA2 160 aa5.03□□□□□ -1.6
TGFA-202ENST00000394241 KRTAP4-11Q9BYQ6 195 aa5.01□□□□□ -1.61
TGFA-202ENST00000394241 MUC5ACP98088 5654 aa5.01□□□□□ -1.61
TGFA-202ENST00000394241 SYNE1Q8NF91 8797 aaKnown RBP4.95□□□□□ -1.62
TGFA-202ENST00000394241 MUC5BQ9HC84 5762 aaPredicted RBP4.92□□□□□ -1.62
TGFA-202ENST00000394241 MT1AP04731 61 aa4.91□□□□□ -1.62
TGFA-202ENST00000394241 KRTAP5-8O75690 187 aa4.89□□□□□ -1.63
TGFA-202ENST00000394241 SVIPQ8NHG7 77 aa4.87□□□□□ -1.63
TGFA-202ENST00000394241 KRTAP6-1Q3LI64 71 aa4.85□□□□□ -1.63
TGFA-202ENST00000394241 KRTAP5-2Q701N4 177 aa4.77□□□□□ -1.65
TGFA-202ENST00000394241 KRTAP9-9Q9BYP9 154 aa4.73□□□□□ -1.65
TGFA-202ENST00000394241 KRTAP9-4Q9BYQ2 154 aa4.69□□□□□ -1.66
TGFA-202ENST00000394241 OBSCNQ5VST9 7968 aa4.62□□□□□ -1.67
TGFA-202ENST00000394241 KRTAP6-2Q3LI66 62 aa4.56□□□□□ -1.68
TGFA-202ENST00000394241 MT3P25713 68 aa4.48□□□□□ -1.69
TGFA-202ENST00000394241 KRTAP5-1Q6L8H4 278 aa4.4□□□□□ -1.71
TGFA-202ENST00000394241 LUZP6Q538Z0 58 aa4.37□□□□□ -1.71
TGFA-202ENST00000394241 LCE1EQ5T753 118 aa4.01□□□□□ -1.77
TGFA-202ENST00000394241 LCE3DQ9BYE3 92 aa3.94□□□□□ -1.78
TGFA-202ENST00000394241 NDUFAF8A1L188 74 aa3.83□□□□□ -1.8
TGFA-202ENST00000394241 KRTAP4-2Q9BYR5 136 aa3.82□□□□□ -1.8
TGFA-202ENST00000394241 LCE1BQ5T7P3 118 aa3.8□□□□□ -1.8
TGFA-202ENST00000394241 LCE3EQ5T5B0 92 aa3.77□□□□□ -1.81
TGFA-202ENST00000394241 LCE1CQ5T751 118 aa3.73□□□□□ -1.81
TGFA-202ENST00000394241 KRTAP4-12Q9BQ66 201 aa3.71□□□□□ -1.82
TGFA-202ENST00000394241 KRTAP5-11Q6L8G4 156 aa3.52□□□□□ -1.85
TGFA-202ENST00000394241 PHGR1C9JFL3 82 aa3.47□□□□□ -1.85
TGFA-202ENST00000394241 LCE1FQ5T754 118 aa3.46□□□□□ -1.86
TGFA-202ENST00000394241 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.44□□□□□ -1.86
TGFA-202ENST00000394241 H3BS24 57 aa3.36□□□□□ -1.87
TGFA-202ENST00000394241 A0A0A0MQY5 61 aa3.23□□□□□ -1.89
TGFA-202ENST00000394241 KRTAP21-2Q3LI59 83 aa3.18□□□□□ -1.9
TGFA-202ENST00000394241 INE1O15225 51 aa3.14□□□□□ -1.91
TGFA-202ENST00000394241 PRM1P04553 51 aa3.04□□□□□ -1.92
TGFA-202ENST00000394241 MUC19Q7Z5P9 8384 aa2.89□□□□□ -1.95
TGFA-202ENST00000394241 KRTAP4-4Q9BYR3 166 aa2.86□□□□□ -1.95
TGFA-202ENST00000394241 KRTAP21-1Q3LI58 79 aa2.65□□□□□ -1.99
TGFA-202ENST00000394241 MUC16Q8WXI7 14507 aa2.01□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 33.2 ms