RNA–Protein interactions for RNA: ENST00000394225.6

NDUFC1-202, Transcript of NADH:ubiquinone oxidoreductase subunit C1, humanhuman

TSL 2

Gene NDUFC1, Length 664 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFC1-202ENST00000394225 NEBP20929 6669 aa5.93□□□□□ -1.46
NDUFC1-202ENST00000394225 LCE1AQ5T7P2 110 aa5.91□□□□□ -1.46
NDUFC1-202ENST00000394225 SPRR2FQ96RM1 72 aa5.91□□□□□ -1.46
NDUFC1-202ENST00000394225 C10orf95Q9H7T3 257 aa5.88□□□□□ -1.47
NDUFC1-202ENST00000394225 TNP1P09430 55 aa5.85□□□□□ -1.47
NDUFC1-202ENST00000394225 MDN1Q9NU22 5596 aa5.8□□□□□ -1.48
NDUFC1-202ENST00000394225 CDC42SE1Q9NRR8 79 aa5.77□□□□□ -1.49
NDUFC1-202ENST00000394225 SPRR2EP22531 72 aa5.74□□□□□ -1.49
NDUFC1-202ENST00000394225 SPRR2BP35325 72 aa5.74□□□□□ -1.49
NDUFC1-202ENST00000394225 SPRR2AP35326 72 aa5.74□□□□□ -1.49
NDUFC1-202ENST00000394225 KRTAP20-1Q3LI63 56 aa5.72□□□□□ -1.49
NDUFC1-202ENST00000394225 KRTAP25-1Q3LHN0 102 aa5.69□□□□□ -1.5
NDUFC1-202ENST00000394225 KRTAP19-7Q3SYF9 63 aa5.67□□□□□ -1.5
NDUFC1-202ENST00000394225 LCE3AQ5TA76 89 aa5.66□□□□□ -1.5
NDUFC1-202ENST00000394225 MT1EP04732 61 aa5.62□□□□□ -1.51
NDUFC1-202ENST00000394225 KRTAP19-5Q3LI72 72 aa5.62□□□□□ -1.51
NDUFC1-202ENST00000394225 ROMO1P60602 79 aa5.57□□□□□ -1.52
NDUFC1-202ENST00000394225 SPRR2DP22532 72 aa5.56□□□□□ -1.52
NDUFC1-202ENST00000394225 KRTAP2-3P0C7H8 128 aa5.52□□□□□ -1.53
NDUFC1-202ENST00000394225 KRTAP19-3Q7Z4W3 81 aa5.52□□□□□ -1.53
NDUFC1-202ENST00000394225 KRTAP2-4Q9BYR9 128 aa5.52□□□□□ -1.53
NDUFC1-202ENST00000394225 BRK1Q8WUW1 75 aa5.49□□□□□ -1.53
NDUFC1-202ENST00000394225 KRTAP2-2Q9BYT5 123 aa5.49□□□□□ -1.53
NDUFC1-202ENST00000394225 KRTAP12-3P60328 96 aa5.47□□□□□ -1.53
NDUFC1-202ENST00000394225 MT1GP13640 62 aa5.43□□□□□ -1.54
NDUFC1-202ENST00000394225 MT1LQ93083 61 aa5.43□□□□□ -1.54
NDUFC1-202ENST00000394225 PP632Q6XCG6 107 aa5.42□□□□□ -1.54
NDUFC1-202ENST00000394225 MT3P25713 68 aa5.34□□□□□ -1.55
NDUFC1-202ENST00000394225 KRTAP2-1Q9BYU5 128 aa5.34□□□□□ -1.55
NDUFC1-202ENST00000394225 MT1MQ8N339 61 aa5.33□□□□□ -1.56
NDUFC1-202ENST00000394225 DSTQ03001 7570 aaKnown RBP5.23□□□□□ -1.57
NDUFC1-202ENST00000394225 PMAIP1Q13794 54 aa5.18□□□□□ -1.58
NDUFC1-202ENST00000394225 KRTAP4-3Q9BYR4 195 aa5.15□□□□□ -1.59
NDUFC1-202ENST00000394225 PRO0628Q9UI54 55 aa5.08□□□□□ -1.6
NDUFC1-202ENST00000394225 LCE3CQ5T5A8 94 aa5.07□□□□□ -1.6
NDUFC1-202ENST00000394225 PRAC1Q96KF2 57 aa5.07□□□□□ -1.6
NDUFC1-202ENST00000394225 GPR98Q8WXG9 6306 aa4.94□□□□□ -1.62
NDUFC1-202ENST00000394225 LCE1FQ5T754 118 aa4.91□□□□□ -1.62
NDUFC1-202ENST00000394225 NDUFAF8A1L188 74 aa4.9□□□□□ -1.63
NDUFC1-202ENST00000394225 KRTAP5-4Q6L8H1 288 aa4.89□□□□□ -1.63
NDUFC1-202ENST00000394225 LCE1EQ5T753 118 aa4.86□□□□□ -1.63
NDUFC1-202ENST00000394225 KRTAP5-5Q701N2 237 aaPredicted RBP4.85□□□□□ -1.63
NDUFC1-202ENST00000394225 KRTAP5-11Q6L8G4 156 aa4.83□□□□□ -1.64
NDUFC1-202ENST00000394225 MT4P47944 62 aa4.81□□□□□ -1.64
NDUFC1-202ENST00000394225 KTN1-AS1Q86SY8 53 aa4.79□□□□□ -1.64
NDUFC1-202ENST00000394225 HMCN1Q96RW7 5635 aa4.75□□□□□ -1.65
NDUFC1-202ENST00000394225 KRTAP9-6A8MVA2 160 aa4.72□□□□□ -1.65
NDUFC1-202ENST00000394225 KRTAP12-4P60329 112 aa4.68□□□□□ -1.66
NDUFC1-202ENST00000394225 SPRR5A0A1B0GTR4 108 aa4.63□□□□□ -1.67
NDUFC1-202ENST00000394225 MT1AP04731 61 aa4.63□□□□□ -1.67
NDUFC1-202ENST00000394225 SYNE1Q8NF91 8797 aaKnown RBP4.61□□□□□ -1.67
NDUFC1-202ENST00000394225 KRTAP20-2Q3LI61 65 aa4.59□□□□□ -1.67
NDUFC1-202ENST00000394225 AHNAK2Q8IVF2 5795 aa4.59□□□□□ -1.68
NDUFC1-202ENST00000394225 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.58□□□□□ -1.68
NDUFC1-202ENST00000394225 KRTAP6-1Q3LI64 71 aa4.56□□□□□ -1.68
NDUFC1-202ENST00000394225 KRTAP5-10Q6L8G5 202 aa4.5□□□□□ -1.69
NDUFC1-202ENST00000394225 KRTAP5-7Q6L8G8 165 aa4.35□□□□□ -1.71
NDUFC1-202ENST00000394225 KRTAP5-2Q701N4 177 aa4.34□□□□□ -1.71
NDUFC1-202ENST00000394225 KRTAP6-2Q3LI66 62 aa4.3□□□□□ -1.72
NDUFC1-202ENST00000394225 LCE3EQ5T5B0 92 aa4.23□□□□□ -1.73
NDUFC1-202ENST00000394225 LUZP6Q538Z0 58 aa4.14□□□□□ -1.75
NDUFC1-202ENST00000394225 KRTAP5-1Q6L8H4 278 aa4.06□□□□□ -1.76
NDUFC1-202ENST00000394225 OBSCNQ5VST9 7968 aa4□□□□□ -1.77
NDUFC1-202ENST00000394225 KRTAP5-8O75690 187 aa3.95□□□□□ -1.78
NDUFC1-202ENST00000394225 MUC5BQ9HC84 5762 aaPredicted RBP3.86□□□□□ -1.79
NDUFC1-202ENST00000394225 KRTAP4-4Q9BYR3 166 aa3.85□□□□□ -1.79
NDUFC1-202ENST00000394225 AHNAKQ09666 5890 aaKnown RBP3.81□□□□□ -1.8
NDUFC1-202ENST00000394225 MUC5ACP98088 5654 aa3.8□□□□□ -1.8
NDUFC1-202ENST00000394225 LCE3DQ9BYE3 92 aa3.73□□□□□ -1.81
NDUFC1-202ENST00000394225 LCE1BQ5T7P3 118 aa3.54□□□□□ -1.84
NDUFC1-202ENST00000394225 LCE1CQ5T751 118 aa3.53□□□□□ -1.84
NDUFC1-202ENST00000394225 KRTAP21-2Q3LI59 83 aa3□□□□□ -1.93
NDUFC1-202ENST00000394225 INE1O15225 51 aa2.99□□□□□ -1.93
NDUFC1-202ENST00000394225 PRM1P04553 51 aa2.85□□□□□ -1.95
NDUFC1-202ENST00000394225 PHGR1C9JFL3 82 aa2.72□□□□□ -1.97
NDUFC1-202ENST00000394225 MUC19Q7Z5P9 8384 aa2.6□□□□□ -1.99
NDUFC1-202ENST00000394225 KRTAP21-1Q3LI58 79 aa2□□□□□ -2.09
NDUFC1-202ENST00000394225 MUC16Q8WXI7 14507 aa1.76□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 92 ms