RNA–Protein interactions for RNA: ENST00000394114.2

CASC3-202, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 2,792 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-202ENST00000394114 KRTAP10-10P60014 251 aa2.61□□□□□ -1.99
CASC3-202ENST00000394114 GPR98Q8WXG9 6306 aa2.61□□□□□ -1.99
CASC3-202ENST00000394114 SPRR2GQ9BYE4 73 aa2.54□□□□□ -2
CASC3-202ENST00000394114 SSPOA2VEC9 5147 aa2.53□□□□□ -2
CASC3-202ENST00000394114 INE1O15225 51 aa2.51□□□□□ -2.01
CASC3-202ENST00000394114 SPRR5A0A1B0GTR4 108 aa2.5□□□□□ -2.01
CASC3-202ENST00000394114 MT1BP07438 61 aa2.46□□□□□ -2.02
CASC3-202ENST00000394114 SYNE2Q8WXH0 6885 aaKnown RBP2.46□□□□□ -2.02
CASC3-202ENST00000394114 KRTAP19-8Q3LI54 63 aa2.46□□□□□ -2.02
CASC3-202ENST00000394114 LCE3EQ5T5B0 92 aa2.45□□□□□ -2.02
CASC3-202ENST00000394114 NEBP20929 6669 aa2.44□□□□□ -2.02
CASC3-202ENST00000394114 KMT2DO14686 5537 aa2.43□□□□□ -2.02
CASC3-202ENST00000394114 KRTAP20-1Q3LI63 56 aa2.43□□□□□ -2.02
CASC3-202ENST00000394114 FCGBPQ9Y6R7 5405 aaPredicted RBP2.4□□□□□ -2.03
CASC3-202ENST00000394114 MT1XP80297 61 aa2.39□□□□□ -2.03
CASC3-202ENST00000394114 KRTAP10-5P60370 271 aa2.39□□□□□ -2.03
CASC3-202ENST00000394114 TNP1P09430 55 aa2.38□□□□□ -2.03
CASC3-202ENST00000394114 MACF1Q9UPN3 7388 aaKnown RBP2.37□□□□□ -2.03
CASC3-202ENST00000394114 PP632Q6XCG6 107 aa2.37□□□□□ -2.03
CASC3-202ENST00000394114 KRTAP10-7P60409 375 aaPredicted RBP2.32□□□□□ -2.04
CASC3-202ENST00000394114 KRTAP6-3Q3LI67 103 aa2.32□□□□□ -2.04
CASC3-202ENST00000394114 LCE3AQ5TA76 89 aa2.31□□□□□ -2.04
CASC3-202ENST00000394114 LCE1EQ5T753 118 aa2.26□□□□□ -2.05
CASC3-202ENST00000394114 KRTAP19-6Q3LI70 58 aa2.25□□□□□ -2.05
CASC3-202ENST00000394114 MUC5BQ9HC84 5762 aaPredicted RBP2.25□□□□□ -2.05
CASC3-202ENST00000394114 MUC12Q9UKN1 5478 aa2.24□□□□□ -2.05
CASC3-202ENST00000394114 KRTAP5-11Q6L8G4 156 aa2.22□□□□□ -2.05
CASC3-202ENST00000394114 KRTAP8-1Q8IUC2 63 aa2.21□□□□□ -2.06
CASC3-202ENST00000394114 KRTAP2-3P0C7H8 128 aa2.2□□□□□ -2.06
CASC3-202ENST00000394114 KRTAP2-4Q9BYR9 128 aa2.2□□□□□ -2.06
CASC3-202ENST00000394114 KRTAP12-3P60328 96 aa2.2□□□□□ -2.06
CASC3-202ENST00000394114 MDN1Q9NU22 5596 aa2.19□□□□□ -2.06
CASC3-202ENST00000394114 KRTAP19-5Q3LI72 72 aa2.19□□□□□ -2.06
CASC3-202ENST00000394114 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.19□□□□□ -2.06
CASC3-202ENST00000394114 LCE3DQ9BYE3 92 aa2.19□□□□□ -2.06
CASC3-202ENST00000394114 DSTQ03001 7570 aaKnown RBP2.17□□□□□ -2.06
CASC3-202ENST00000394114 KRTAP19-7Q3SYF9 63 aa2.14□□□□□ -2.07
CASC3-202ENST00000394114 KRTAP5-9P26371 169 aa2.11□□□□□ -2.07
CASC3-202ENST00000394114 KRTAP2-1Q9BYU5 128 aa2.1□□□□□ -2.07
CASC3-202ENST00000394114 MT1EP04732 61 aa2.09□□□□□ -2.08
CASC3-202ENST00000394114 SPRR2FQ96RM1 72 aa2.07□□□□□ -2.08
CASC3-202ENST00000394114 AHNAKQ09666 5890 aaKnown RBP2.07□□□□□ -2.08
CASC3-202ENST00000394114 MT1LQ93083 61 aa2.05□□□□□ -2.08
CASC3-202ENST00000394114 KRTAP4-3Q9BYR4 195 aa2□□□□□ -2.09
CASC3-202ENST00000394114 AHNAK2Q8IVF2 5795 aa2□□□□□ -2.09
CASC3-202ENST00000394114 KRTAP19-3Q7Z4W3 81 aa1.99□□□□□ -2.09
CASC3-202ENST00000394114 KRTAP9-6A8MVA2 160 aa1.99□□□□□ -2.09
CASC3-202ENST00000394114 MT1MQ8N339 61 aa1.97□□□□□ -2.09
CASC3-202ENST00000394114 MT1GP13640 62 aa1.96□□□□□ -2.1
CASC3-202ENST00000394114 SPRR2EP22531 72 aa1.96□□□□□ -2.1
CASC3-202ENST00000394114 SPRR2BP35325 72 aa1.96□□□□□ -2.1
CASC3-202ENST00000394114 SPRR2AP35326 72 aa1.96□□□□□ -2.1
CASC3-202ENST00000394114 KRTAP12-4P60329 112 aa1.96□□□□□ -2.1
CASC3-202ENST00000394114 KRTAP5-10Q6L8G5 202 aa1.92□□□□□ -2.1
CASC3-202ENST00000394114 KRTAP5-7Q6L8G8 165 aa1.92□□□□□ -2.1
CASC3-202ENST00000394114 KRTAP5-1Q6L8H4 278 aa1.9□□□□□ -2.11
CASC3-202ENST00000394114 SYNE1Q8NF91 8797 aaKnown RBP1.9□□□□□ -2.11
CASC3-202ENST00000394114 KRTAP5-4Q6L8H1 288 aa1.88□□□□□ -2.11
CASC3-202ENST00000394114 SPRR2DP22532 72 aa1.87□□□□□ -2.11
CASC3-202ENST00000394114 OBSCNQ5VST9 7968 aa1.87□□□□□ -2.11
CASC3-202ENST00000394114 KRTAP4-4Q9BYR3 166 aa1.82□□□□□ -2.12
CASC3-202ENST00000394114 KRTAP6-1Q3LI64 71 aa1.75□□□□□ -2.13
CASC3-202ENST00000394114 KRTAP5-5Q701N2 237 aaPredicted RBP1.75□□□□□ -2.13
CASC3-202ENST00000394114 MT1AP04731 61 aa1.72□□□□□ -2.13
CASC3-202ENST00000394114 MT4P47944 62 aa1.72□□□□□ -2.13
CASC3-202ENST00000394114 MUC5ACP98088 5654 aa1.69□□□□□ -2.14
CASC3-202ENST00000394114 KRTAP5-2Q701N4 177 aa1.68□□□□□ -2.14
CASC3-202ENST00000394114 KRTAP5-8O75690 187 aa1.67□□□□□ -2.14
CASC3-202ENST00000394114 KRTAP6-2Q3LI66 62 aa1.61□□□□□ -2.15
CASC3-202ENST00000394114 PRM1P04553 51 aa1.58□□□□□ -2.16
CASC3-202ENST00000394114 KRTAP20-2Q3LI61 65 aa1.56□□□□□ -2.16
CASC3-202ENST00000394114 MUC19Q7Z5P9 8384 aa1.53□□□□□ -2.16
CASC3-202ENST00000394114 LCE1CQ5T751 118 aa1.42□□□□□ -2.18
CASC3-202ENST00000394114 LCE1BQ5T7P3 118 aa1.42□□□□□ -2.18
CASC3-202ENST00000394114 PHGR1C9JFL3 82 aa1.15□□□□□ -2.22
CASC3-202ENST00000394114 KRTAP21-2Q3LI59 83 aa1.13□□□□□ -2.23
CASC3-202ENST00000394114 KRTAP21-1Q3LI58 79 aa1□□□□□ -2.25
CASC3-202ENST00000394114 MUC16Q8WXI7 14507 aa0.6□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 29 ms