RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 KRTAP6-3Q3LI67 103 aa5.47□□□□□ -1.53
PTN-202ENST00000393083 KRTAP10-7P60409 375 aaPredicted RBP5.38□□□□□ -1.55
PTN-202ENST00000393083 KMT2DO14686 5537 aa5.35□□□□□ -1.55
PTN-202ENST00000393083 KRTAP5-9P26371 169 aa5.33□□□□□ -1.56
PTN-202ENST00000393083 KRTAP10-12P60413 245 aa5.33□□□□□ -1.56
PTN-202ENST00000393083 PP632Q6XCG6 107 aa5.33□□□□□ -1.56
PTN-202ENST00000393083 KRTAP23-1A1A580 65 aa5.3□□□□□ -1.56
PTN-202ENST00000393083 LCE3AQ5TA76 89 aa5.29□□□□□ -1.56
PTN-202ENST00000393083 KRTAP8-1Q8IUC2 63 aa5.26□□□□□ -1.57
PTN-202ENST00000393083 MUC12Q9UKN1 5478 aa5.26□□□□□ -1.57
PTN-202ENST00000393083 NEBP20929 6669 aa5.21□□□□□ -1.58
PTN-202ENST00000393083 SPRR2FQ96RM1 72 aa5.21□□□□□ -1.58
PTN-202ENST00000393083 MDN1Q9NU22 5596 aa5.15□□□□□ -1.59
PTN-202ENST00000393083 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.13□□□□□ -1.59
PTN-202ENST00000393083 SPRR2EP22531 72 aa5.07□□□□□ -1.6
PTN-202ENST00000393083 SPRR2BP35325 72 aa5.07□□□□□ -1.6
PTN-202ENST00000393083 SPRR2AP35326 72 aa5.07□□□□□ -1.6
PTN-202ENST00000393083 KRTAP12-3P60328 96 aa5.07□□□□□ -1.6
PTN-202ENST00000393083 LCE1AQ5T7P2 110 aa5.07□□□□□ -1.6
PTN-202ENST00000393083 KRTAP19-5Q3LI72 72 aa5.05□□□□□ -1.6
PTN-202ENST00000393083 KRTAP19-7Q3SYF9 63 aa5.01□□□□□ -1.61
PTN-202ENST00000393083 KRTAP15-1Q3LI76 137 aa4.95□□□□□ -1.62
PTN-202ENST00000393083 MT1EP04732 61 aa4.95□□□□□ -1.62
PTN-202ENST00000393083 KRTAP20-1Q3LI63 56 aa4.94□□□□□ -1.62
PTN-202ENST00000393083 SPRR2DP22532 72 aa4.89□□□□□ -1.63
PTN-202ENST00000393083 KRTAP2-3P0C7H8 128 aa4.88□□□□□ -1.63
PTN-202ENST00000393083 KRTAP2-4Q9BYR9 128 aa4.88□□□□□ -1.63
PTN-202ENST00000393083 KRTAP19-3Q7Z4W3 81 aa4.84□□□□□ -1.63
PTN-202ENST00000393083 MT1LQ93083 61 aa4.81□□□□□ -1.64
PTN-202ENST00000393083 MT1GP13640 62 aa4.76□□□□□ -1.65
PTN-202ENST00000393083 KRTAP2-2Q9BYT5 123 aa4.74□□□□□ -1.65
PTN-202ENST00000393083 KRTAP2-1Q9BYU5 128 aa4.74□□□□□ -1.65
PTN-202ENST00000393083 LCE3CQ5T5A8 94 aa4.73□□□□□ -1.65
PTN-202ENST00000393083 SPRR5A0A1B0GTR4 108 aa4.7□□□□□ -1.66
PTN-202ENST00000393083 MT1MQ8N339 61 aa4.69□□□□□ -1.66
PTN-202ENST00000393083 DSTQ03001 7570 aaKnown RBP4.64□□□□□ -1.67
PTN-202ENST00000393083 KRTAP5-11Q6L8G4 156 aa4.58□□□□□ -1.68
PTN-202ENST00000393083 KRTAP4-3Q9BYR4 195 aa4.58□□□□□ -1.68
PTN-202ENST00000393083 LUZP6Q538Z0 58 aa4.55□□□□□ -1.68
PTN-202ENST00000393083 KRTAP9-6A8MVA2 160 aa4.47□□□□□ -1.69
PTN-202ENST00000393083 NDUFAF8A1L188 74 aa4.43□□□□□ -1.7
PTN-202ENST00000393083 KRTAP5-4Q6L8H1 288 aa4.38□□□□□ -1.71
PTN-202ENST00000393083 KRTAP5-5Q701N2 237 aaPredicted RBP4.3□□□□□ -1.72
PTN-202ENST00000393083 KRTAP5-1Q6L8H4 278 aa4.28□□□□□ -1.72
PTN-202ENST00000393083 MT4P47944 62 aa4.27□□□□□ -1.73
PTN-202ENST00000393083 KRTAP4-4Q9BYR3 166 aa4.23□□□□□ -1.73
PTN-202ENST00000393083 LCE1EQ5T753 118 aa4.22□□□□□ -1.73
PTN-202ENST00000393083 HMCN1Q96RW7 5635 aa4.21□□□□□ -1.73
PTN-202ENST00000393083 SYNE1Q8NF91 8797 aaKnown RBP4.1□□□□□ -1.75
PTN-202ENST00000393083 MT1AP04731 61 aa4.09□□□□□ -1.75
PTN-202ENST00000393083 KRTAP12-4P60329 112 aa4.08□□□□□ -1.76
PTN-202ENST00000393083 KRTAP20-2Q3LI61 65 aa4.07□□□□□ -1.76
PTN-202ENST00000393083 KRTAP6-1Q3LI64 71 aa4.05□□□□□ -1.76
PTN-202ENST00000393083 GPR98Q8WXG9 6306 aa4.01□□□□□ -1.77
PTN-202ENST00000393083 AHNAK2Q8IVF2 5795 aa3.98□□□□□ -1.77
PTN-202ENST00000393083 KRTAP5-10Q6L8G5 202 aa3.88□□□□□ -1.79
PTN-202ENST00000393083 KRTAP5-2Q701N4 177 aa3.87□□□□□ -1.79
PTN-202ENST00000393083 KRTAP6-2Q3LI66 62 aa3.79□□□□□ -1.8
PTN-202ENST00000393083 MT3P25713 68 aa3.69□□□□□ -1.82
PTN-202ENST00000393083 KRTAP5-7Q6L8G8 165 aa3.69□□□□□ -1.82
PTN-202ENST00000393083 INE1O15225 51 aa3.63□□□□□ -1.83
PTN-202ENST00000393083 KRTAP5-8O75690 187 aa3.54□□□□□ -1.84
PTN-202ENST00000393083 LCE3DQ9BYE3 92 aa3.54□□□□□ -1.84
PTN-202ENST00000393083 OBSCNQ5VST9 7968 aa3.53□□□□□ -1.84
PTN-202ENST00000393083 LCE3EQ5T5B0 92 aa3.45□□□□□ -1.86
PTN-202ENST00000393083 MUC5ACP98088 5654 aa3.31□□□□□ -1.88
PTN-202ENST00000393083 MUC5BQ9HC84 5762 aaPredicted RBP3.23□□□□□ -1.89
PTN-202ENST00000393083 LCE1FQ5T754 118 aa3.21□□□□□ -1.89
PTN-202ENST00000393083 AHNAKQ09666 5890 aaKnown RBP3.18□□□□□ -1.9
PTN-202ENST00000393083 LCE1CQ5T751 118 aa3.11□□□□□ -1.91
PTN-202ENST00000393083 LCE1BQ5T7P3 118 aa3.11□□□□□ -1.91
PTN-202ENST00000393083 PRM1P04553 51 aa3.01□□□□□ -1.93
PTN-202ENST00000393083 KRTAP21-2Q3LI59 83 aa2.66□□□□□ -1.98
PTN-202ENST00000393083 PHGR1C9JFL3 82 aa2.4□□□□□ -2.02
PTN-202ENST00000393083 MUC19Q7Z5P9 8384 aa2.22□□□□□ -2.05
PTN-202ENST00000393083 KRTAP21-1Q3LI58 79 aa1.81□□□□□ -2.12
PTN-202ENST00000393083 MUC16Q8WXI7 14507 aa1.55□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 74.2 ms