RNA–Protein interactions for RNA: ENST00000392351.7

HOMER3-202, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,557 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-202ENST00000392351 KRTAP23-1A1A580 65 aa9.18□□□□□ -0.94
HOMER3-202ENST00000392351 KRTAP19-3Q7Z4W3 81 aa9.18□□□□□ -0.94
HOMER3-202ENST00000392351 SPRR2DP22532 72 aa9.17□□□□□ -0.94
HOMER3-202ENST00000392351 KRTAP12-3P60328 96 aa9.17□□□□□ -0.94
HOMER3-202ENST00000392351 PMAIP1Q13794 54 aa9.16□□□□□ -0.94
HOMER3-202ENST00000392351 LCE5AQ5TCM9 118 aa9.11□□□□□ -0.95
HOMER3-202ENST00000392351 MT1LQ93083 61 aa9.07□□□□□ -0.96
HOMER3-202ENST00000392351 MT1GP13640 62 aa9.02□□□□□ -0.97
HOMER3-202ENST00000392351 PP632Q6XCG6 107 aa9□□□□□ -0.97
HOMER3-202ENST00000392351 KRTAP2-2Q9BYT5 123 aa8.99□□□□□ -0.97
HOMER3-202ENST00000392351 KRTAP2-1Q9BYU5 128 aa8.99□□□□□ -0.97
HOMER3-202ENST00000392351 MT1MQ8N339 61 aa8.89□□□□□ -0.99
HOMER3-202ENST00000392351 LCE3BQ5TA77 95 aa8.87□□□□□ -0.99
HOMER3-202ENST00000392351 KRTAP15-1Q3LI76 137 aa8.78□□□□□ -1
HOMER3-202ENST00000392351 DSTQ03001 7570 aaKnown RBP8.75□□□□□ -1.01
HOMER3-202ENST00000392351 KRTAP4-7Q9BYR0 210 aa8.69□□□□□ -1.02
HOMER3-202ENST00000392351 KRTAP4-3Q9BYR4 195 aa8.68□□□□□ -1.02
HOMER3-202ENST00000392351 KTN1-AS1Q86SY8 53 aa8.65□□□□□ -1.02
HOMER3-202ENST00000392351 KRTAP19-4Q3LI73 84 aa8.62□□□□□ -1.03
HOMER3-202ENST00000392351 PRAC1Q96KF2 57 aa8.57□□□□□ -1.04
HOMER3-202ENST00000392351 LCE3CQ5T5A8 94 aa8.5□□□□□ -1.05
HOMER3-202ENST00000392351 KRTAP4-9Q9BYQ8 210 aa8.27□□□□□ -1.09
HOMER3-202ENST00000392351 LOC100996750A0A140TA64 210 aa8.2□□□□□ -1.1
HOMER3-202ENST00000392351 SVIPQ8NHG7 77 aa8.2□□□□□ -1.1
HOMER3-202ENST00000392351 LCE4AQ5TA78 99 aa8.11□□□□□ -1.11
HOMER3-202ENST00000392351 KRTAP5-4Q6L8H1 288 aa8.09□□□□□ -1.11
HOMER3-202ENST00000392351 KRTAP5-5Q701N2 237 aaPredicted RBP8.08□□□□□ -1.12
HOMER3-202ENST00000392351 LCE1DQ5T752 114 aa8.06□□□□□ -1.12
HOMER3-202ENST00000392351 KRTAP9-6A8MVA2 160 aa8.01□□□□□ -1.13
HOMER3-202ENST00000392351 MT4P47944 62 aa8□□□□□ -1.13
HOMER3-202ENST00000392351 HMCN1Q96RW7 5635 aa7.86□□□□□ -1.15
HOMER3-202ENST00000392351 KRTAP4-6Q9BYQ5 205 aa7.82□□□□□ -1.16
HOMER3-202ENST00000392351 GPR98Q8WXG9 6306 aa7.76□□□□□ -1.17
HOMER3-202ENST00000392351 MT1AP04731 61 aa7.72□□□□□ -1.17
HOMER3-202ENST00000392351 KRTAP12-4P60329 112 aa7.72□□□□□ -1.17
HOMER3-202ENST00000392351 KRTAP6-1Q3LI64 71 aa7.66□□□□□ -1.18
HOMER3-202ENST00000392351 SYNE1Q8NF91 8797 aaKnown RBP7.65□□□□□ -1.18
HOMER3-202ENST00000392351 SPRR5A0A1B0GTR4 108 aa7.63□□□□□ -1.19
HOMER3-202ENST00000392351 KRTAP20-2Q3LI61 65 aa7.61□□□□□ -1.19
HOMER3-202ENST00000392351 AHNAK2Q8IVF2 5795 aa7.52□□□□□ -1.21
HOMER3-202ENST00000392351 KRTAP5-10Q6L8G5 202 aa7.42□□□□□ -1.22
HOMER3-202ENST00000392351 KRTAP9-4Q9BYQ2 154 aa7.39□□□□□ -1.23
HOMER3-202ENST00000392351 KRTAP5-3Q6L8H2 238 aa7.35□□□□□ -1.23
HOMER3-202ENST00000392351 KRTAP6-2Q3LI66 62 aa7.2□□□□□ -1.26
HOMER3-202ENST00000392351 KRTAP5-2Q701N4 177 aa7.2□□□□□ -1.26
HOMER3-202ENST00000392351 KRTAP5-7Q6L8G8 165 aa7.11□□□□□ -1.27
HOMER3-202ENST00000392351 LUZP6Q538Z0 58 aa7.1□□□□□ -1.27
HOMER3-202ENST00000392351 MT3P25713 68 aa7.03□□□□□ -1.28
HOMER3-202ENST00000392351 KRTAP4-11Q9BYQ6 195 aa6.81□□□□□ -1.32
HOMER3-202ENST00000392351 OBSCNQ5VST9 7968 aa6.69□□□□□ -1.34
HOMER3-202ENST00000392351 NDUFAF8A1L188 74 aa6.64□□□□□ -1.35
HOMER3-202ENST00000392351 KRTAP5-8O75690 187 aa6.58□□□□□ -1.36
HOMER3-202ENST00000392351 KRTAP5-1Q6L8H4 278 aa6.35□□□□□ -1.39
HOMER3-202ENST00000392351 LCE1EQ5T753 118 aa6.29□□□□□ -1.4
HOMER3-202ENST00000392351 LCE3DQ9BYE3 92 aa6.26□□□□□ -1.41
HOMER3-202ENST00000392351 KRTAP9-9Q9BYP9 154 aa6.22□□□□□ -1.41
HOMER3-202ENST00000392351 MUC5ACP98088 5654 aa6.17□□□□□ -1.42
HOMER3-202ENST00000392351 MUC5BQ9HC84 5762 aaPredicted RBP6.16□□□□□ -1.42
HOMER3-202ENST00000392351 AHNAKQ09666 5890 aaKnown RBP6.08□□□□□ -1.44
HOMER3-202ENST00000392351 LCE3EQ5T5B0 92 aa5.98□□□□□ -1.45
HOMER3-202ENST00000392351 LCE1BQ5T7P3 118 aa5.92□□□□□ -1.46
HOMER3-202ENST00000392351 KRTAP4-2Q9BYR5 136 aa5.9□□□□□ -1.46
HOMER3-202ENST00000392351 LCE1CQ5T751 118 aa5.84□□□□□ -1.47
HOMER3-202ENST00000392351 A0A0A0MQY5 61 aa5.76□□□□□ -1.49
HOMER3-202ENST00000392351 H3BS24 57 aa5.57□□□□□ -1.52
HOMER3-202ENST00000392351 INE1O15225 51 aa5.5□□□□□ -1.53
HOMER3-202ENST00000392351 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.39□□□□□ -1.55
HOMER3-202ENST00000392351 KRTAP5-11Q6L8G4 156 aa5.24□□□□□ -1.57
HOMER3-202ENST00000392351 KRTAP4-12Q9BQ66 201 aa5.14□□□□□ -1.59
HOMER3-202ENST00000392351 KRTAP21-2Q3LI59 83 aa5.02□□□□□ -1.61
HOMER3-202ENST00000392351 LCE1FQ5T754 118 aa4.92□□□□□ -1.62
HOMER3-202ENST00000392351 PRM1P04553 51 aa4.87□□□□□ -1.63
HOMER3-202ENST00000392351 KRTAP4-4Q9BYR3 166 aa4.53□□□□□ -1.68
HOMER3-202ENST00000392351 PHGR1C9JFL3 82 aa4.51□□□□□ -1.69
HOMER3-202ENST00000392351 MUC19Q7Z5P9 8384 aa4.07□□□□□ -1.76
HOMER3-202ENST00000392351 KRTAP21-1Q3LI58 79 aa3.26□□□□□ -1.89
HOMER3-202ENST00000392351 MUC16Q8WXI7 14507 aa2.85□□□□□ -1.95
Retrieved 77 of 20,778 RNA–protein pairs in 10.7 ms