RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 TFF3Q07654 80 aa-2.33□□□□□ -2.78
SNORD28B-201ENST00000390993 SMCO4Q9NRQ5 59 aa-2.33□□□□□ -2.78
SNORD28B-201ENST00000390993 SCRIBQ14160 1630 aa-2.33□□□□□ -2.78
SNORD28B-201ENST00000390993 NRXN3Q9Y4C0 1643 aa-2.36□□□□□ -2.79
SNORD28B-201ENST00000390993 DNAH14Q0VDD8 3507 aa-2.37□□□□□ -2.79
SNORD28B-201ENST00000390993 CPS1P31327 1500 aa-2.37□□□□□ -2.79
SNORD28B-201ENST00000390993 CFAP47Q6ZTR5 3102 aa-2.37□□□□□ -2.79
SNORD28B-201ENST00000390993 TRPM2O94759 1503 aa-2.39□□□□□ -2.79
SNORD28B-201ENST00000390993 DNAH12Q6ZR08 3092 aa-2.39□□□□□ -2.79
SNORD28B-201ENST00000390993 MKI67P46013 3256 aaKnown RBP-2.4□□□□□ -2.79
SNORD28B-201ENST00000390993 DEFB133Q30KQ1 61 aa-2.41□□□□□ -2.8
SNORD28B-201ENST00000390993 RHPN1-AS1Q9BWJ2 59 aa-2.41□□□□□ -2.8
SNORD28B-201ENST00000390993 USP34Q70CQ2 3546 aa-2.42□□□□□ -2.8
SNORD28B-201ENST00000390993 CLTCL1P53675 1640 aa-2.42□□□□□ -2.8
SNORD28B-201ENST00000390993 EFCAB5A4FU69 1503 aa-2.42□□□□□ -2.8
SNORD28B-201ENST00000390993 ABCA10Q8WWZ4 1543 aa-2.42□□□□□ -2.8
SNORD28B-201ENST00000390993 ABCA5Q8WWZ7 1642 aa-2.43□□□□□ -2.8
SNORD28B-201ENST00000390993 UNC80Q8N2C7 3258 aa-2.44□□□□□ -2.8
SNORD28B-201ENST00000390993 CD52P31358 61 aa-2.46□□□□□ -2.8
SNORD28B-201ENST00000390993 A0A087WWC5 75 aa-2.47□□□□□ -2.8
SNORD28B-201ENST00000390993 LINC01590Q5TEZ4 76 aa-2.47□□□□□ -2.8
SNORD28B-201ENST00000390993 XIRP2A4UGR9 3374 aa-2.47□□□□□ -2.8
SNORD28B-201ENST00000390993 SMIM5Q71RC9 77 aa-2.49□□□□□ -2.81
SNORD28B-201ENST00000390993 TOMM7Q9P0U1 55 aa-2.49□□□□□ -2.81
SNORD28B-201ENST00000390993 DDX60Q8IY21 1712 aaKnown RBP-2.5□□□□□ -2.81
SNORD28B-201ENST00000390993 LOC400499M0QZD8 3231 aa-2.5□□□□□ -2.81
SNORD28B-201ENST00000390993 NDUFA1O15239 70 aa-2.52□□□□□ -2.81
SNORD28B-201ENST00000390993 HTN1P15515 57 aa-2.52□□□□□ -2.81
SNORD28B-201ENST00000390993 PRXQ9BXM0 1461 aa-2.53□□□□□ -2.81
SNORD28B-201ENST00000390993 A0A096LNI7 61 aa-2.58□□□□□ -2.82
SNORD28B-201ENST00000390993 CMC2Q9NRP2 79 aa-2.58□□□□□ -2.82
SNORD28B-201ENST00000390993 IQGAP1P46940 1657 aa-2.58□□□□□ -2.82
SNORD28B-201ENST00000390993 NFAT5O94916 1531 aa-2.58□□□□□ -2.82
SNORD28B-201ENST00000390993 ADCY10Q96PN6 1610 aa-2.6□□□□□ -2.83
SNORD28B-201ENST00000390993 ABCC8Q09428 1581 aa-2.61□□□□□ -2.83
SNORD28B-201ENST00000390993 FANCD2Q9BXW9 1451 aa-2.62□□□□□ -2.83
SNORD28B-201ENST00000390993 ASPMQ8IZT6 3477 aa-2.63□□□□□ -2.83
SNORD28B-201ENST00000390993 KRTAP19-2Q3LHN2 52 aa-2.65□□□□□ -2.83
SNORD28B-201ENST00000390993 CENPFP49454 3210 aa-2.66□□□□□ -2.83
SNORD28B-201ENST00000390993 BRCA2P51587 3418 aa-2.66□□□□□ -2.84
SNORD28B-201ENST00000390993 DEFB124Q8NES8 71 aa-2.67□□□□□ -2.84
SNORD28B-201ENST00000390993 VCANP13611 3396 aa-2.69□□□□□ -2.84
SNORD28B-201ENST00000390993 CDH23Q9H251 3354 aa-2.69□□□□□ -2.84
SNORD28B-201ENST00000390993 ERICH3Q5RHP9 1530 aa-2.75□□□□□ -2.85
SNORD28B-201ENST00000390993 DUOX1Q9NRD9 1551 aa-2.75□□□□□ -2.85
SNORD28B-201ENST00000390993 SAMD9LQ8IVG5 1584 aa-2.78□□□□□ -2.86
SNORD28B-201ENST00000390993 VPS13AQ96RL7 3174 aa-2.79□□□□□ -2.86
SNORD28B-201ENST00000390993 RPL39P62891 51 aaKnown RBP-2.81□□□□□ -2.86
SNORD28B-201ENST00000390993 TOP2AP11388 1531 aaKnown RBP-2.83□□□□□ -2.86
SNORD28B-201ENST00000390993 LINC01556Q5JQF7 62 aa-2.88□□□□□ -2.87
SNORD28B-201ENST00000390993 ATP7AQ04656 1500 aa-2.92□□□□□ -2.88
SNORD28B-201ENST00000390993 H3BUX3 64 aa-2.92□□□□□ -2.88
SNORD28B-201ENST00000390993 RPL39LQ96EH5 51 aaKnown RBP-2.92□□□□□ -2.88
SNORD28B-201ENST00000390993 MROH2BQ7Z745 1585 aa-2.96□□□□□ -2.88
SNORD28B-201ENST00000390993 SMIM31A0A1B0GVY4 71 aa-2.97□□□□□ -2.88
SNORD28B-201ENST00000390993 SNRPGP15A8MWD9 76 aa-3.01□□□□□ -2.89
SNORD28B-201ENST00000390993 DEFB104AQ8WTQ1 72 aa-3.01□□□□□ -2.89
SNORD28B-201ENST00000390993 UTRNP46939 3433 aa-3.1□□□□□ -2.91
SNORD28B-201ENST00000390993 IQGAP2Q13576 1575 aa-3.12□□□□□ -2.91
SNORD28B-201ENST00000390993 TOMM5Q8N4H5 51 aa-3.17□□□□□ -2.92
SNORD28B-201ENST00000390993 K7EIM0 57 aa-3.18□□□□□ -2.92
SNORD28B-201ENST00000390993 APELAP0DMC3 54 aa-3.2□□□□□ -2.92
SNORD28B-201ENST00000390993 A0A096LPF7 62 aa-3.25□□□□□ -2.93
SNORD28B-201ENST00000390993 PRCDQ00LT1 54 aa-3.27□□□□□ -2.93
SNORD28B-201ENST00000390993 ARHGAP5-AS1Q96IT6 56 aa-3.27□□□□□ -2.93
SNORD28B-201ENST00000390993 TMEM167AQ8TBQ9 72 aa-3.33□□□□□ -2.94
SNORD28B-201ENST00000390993 HTN3P15516 51 aa-3.37□□□□□ -2.95
SNORD28B-201ENST00000390993 Q9Y3F1 56 aa-3.46□□□□□ -2.96
SNORD28B-201ENST00000390993 GOLGB1Q14789 3259 aaKnown RBP-3.46□□□□□ -2.96
SNORD28B-201ENST00000390993 SNRPGP62308 76 aaKnown RBP-3.54□□□□□ -2.98
SNORD28B-201ENST00000390993 GCC2Q8IWJ2 1684 aa-3.6□□□□□ -2.99
SNORD28B-201ENST00000390993 RPL39P5Q59GN2 51 aa-3.65□□□□□ -2.99
SNORD28B-201ENST00000390993 H3BSH0 61 aa-3.68□□□□□ -3
SNORD28B-201ENST00000390993 DEFB108AA8MXU0 73 aa-3.69□□□□□ -3
SNORD28B-201ENST00000390993 COX14Q96I36 57 aa-3.74□□□□□ -3.01
SNORD28B-201ENST00000390993 DEFB108BQ8NET1 73 aa-3.97□□□□□ -3.04
SNORD28B-201ENST00000390993 STATHP02808 62 aa-4.37□□□□□ -3.11
Retrieved 77 of 20,778 RNA–protein pairs in 68.7 ms