RNA–Protein interactions for RNA: ENST00000390964.1

SNORA40.3-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 122 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.3-201ENST00000390964 CENPEQ02224 2701 aa-5.16□□□□□ -3.23
SNORA40.3-201ENST00000390964 ABCA5Q8WWZ7 1642 aa-5.17□□□□□ -3.24
SNORA40.3-201ENST00000390964 SMIM2Q9BVW6 85 aa-5.19□□□□□ -3.24
SNORA40.3-201ENST00000390964 SCRIBQ14160 1630 aa-5.19□□□□□ -3.24
SNORA40.3-201ENST00000390964 NRXN3Q9Y4C0 1643 aa-5.19□□□□□ -3.24
SNORA40.3-201ENST00000390964 A0A087WWC5 75 aa-5.24□□□□□ -3.25
SNORA40.3-201ENST00000390964 CLTCL1P53675 1640 aa-5.25□□□□□ -3.25
SNORA40.3-201ENST00000390964 TRPM2O94759 1503 aa-5.26□□□□□ -3.25
SNORA40.3-201ENST00000390964 MUC3AQ02505 3323 aa-5.26□□□□□ -3.25
SNORA40.3-201ENST00000390964 DCHS1Q96JQ0 3298 aa-5.27□□□□□ -3.25
SNORA40.3-201ENST00000390964 DDX60Q8IY21 1712 aaKnown RBP-5.28□□□□□ -3.25
SNORA40.3-201ENST00000390964 IQGAP1P46940 1657 aa-5.34□□□□□ -3.26
SNORA40.3-201ENST00000390964 NFAT5O94916 1531 aa-5.43□□□□□ -3.28
SNORA40.3-201ENST00000390964 PRXQ9BXM0 1461 aa-5.46□□□□□ -3.28
SNORA40.3-201ENST00000390964 SMIM5Q71RC9 77 aa-5.47□□□□□ -3.29
SNORA40.3-201ENST00000390964 TTTY10Q9BZA0 68 aa-5.49□□□□□ -3.29
SNORA40.3-201ENST00000390964 DNAH14Q0VDD8 3507 aa-5.51□□□□□ -3.29
SNORA40.3-201ENST00000390964 ADCY10Q96PN6 1610 aa-5.52□□□□□ -3.29
SNORA40.3-201ENST00000390964 USP34Q70CQ2 3546 aa-5.53□□□□□ -3.29
SNORA40.3-201ENST00000390964 MKI67P46013 3256 aaKnown RBP-5.53□□□□□ -3.29
SNORA40.3-201ENST00000390964 DNAH12Q6ZR08 3092 aa-5.54□□□□□ -3.3
SNORA40.3-201ENST00000390964 XIRP2A4UGR9 3374 aa-5.56□□□□□ -3.3
SNORA40.3-201ENST00000390964 ABCC8Q09428 1581 aa-5.56□□□□□ -3.3
SNORA40.3-201ENST00000390964 NDUFA1O15239 70 aa-5.58□□□□□ -3.3
SNORA40.3-201ENST00000390964 FANCD2Q9BXW9 1451 aa-5.6□□□□□ -3.31
SNORA40.3-201ENST00000390964 CFAP47Q6ZTR5 3102 aa-5.63□□□□□ -3.31
SNORA40.3-201ENST00000390964 RHPN1-AS1Q9BWJ2 59 aa-5.64□□□□□ -3.31
SNORA40.3-201ENST00000390964 CMC2Q9NRP2 79 aa-5.64□□□□□ -3.31
SNORA40.3-201ENST00000390964 DEFB133Q30KQ1 61 aa-5.68□□□□□ -3.32
SNORA40.3-201ENST00000390964 LINC01590Q5TEZ4 76 aa-5.68□□□□□ -3.32
SNORA40.3-201ENST00000390964 UNC80Q8N2C7 3258 aa-5.68□□□□□ -3.32
SNORA40.3-201ENST00000390964 TOMM7Q9P0U1 55 aa-5.7□□□□□ -3.32
SNORA40.3-201ENST00000390964 LOC400499M0QZD8 3231 aa-5.75□□□□□ -3.33
SNORA40.3-201ENST00000390964 HTN1P15515 57 aa-5.93□□□□□ -3.36
SNORA40.3-201ENST00000390964 CD52P31358 61 aa-5.94□□□□□ -3.36
SNORA40.3-201ENST00000390964 A0A096LNI7 61 aa-5.96□□□□□ -3.36
SNORA40.3-201ENST00000390964 ASPMQ8IZT6 3477 aa-5.98□□□□□ -3.37
SNORA40.3-201ENST00000390964 KRTAP19-2Q3LHN2 52 aa-5.99□□□□□ -3.37
SNORA40.3-201ENST00000390964 DUOX1Q9NRD9 1551 aa-6.04□□□□□ -3.38
SNORA40.3-201ENST00000390964 ERICH3Q5RHP9 1530 aa-6.06□□□□□ -3.38
SNORA40.3-201ENST00000390964 BRCA2P51587 3418 aa-6.14□□□□□ -3.39
SNORA40.3-201ENST00000390964 SAMD9LQ8IVG5 1584 aa-6.14□□□□□ -3.39
SNORA40.3-201ENST00000390964 DEFB124Q8NES8 71 aa-6.16□□□□□ -3.4
SNORA40.3-201ENST00000390964 VCANP13611 3396 aa-6.23□□□□□ -3.41
SNORA40.3-201ENST00000390964 RPL39P62891 51 aaKnown RBP-6.25□□□□□ -3.41
SNORA40.3-201ENST00000390964 SMIM31A0A1B0GVY4 71 aa-6.26□□□□□ -3.41
SNORA40.3-201ENST00000390964 CENPFP49454 3210 aa-6.28□□□□□ -3.42
SNORA40.3-201ENST00000390964 TOP2AP11388 1531 aaKnown RBP-6.3□□□□□ -3.42
SNORA40.3-201ENST00000390964 CDH23Q9H251 3354 aa-6.38□□□□□ -3.43
SNORA40.3-201ENST00000390964 RPL39LQ96EH5 51 aaKnown RBP-6.5□□□□□ -3.45
SNORA40.3-201ENST00000390964 ATP7AQ04656 1500 aa-6.51□□□□□ -3.45
SNORA40.3-201ENST00000390964 MROH2BQ7Z745 1585 aa-6.52□□□□□ -3.45
SNORA40.3-201ENST00000390964 SNRPGP15A8MWD9 76 aa-6.53□□□□□ -3.45
SNORA40.3-201ENST00000390964 VPS13AQ96RL7 3174 aa-6.56□□□□□ -3.46
SNORA40.3-201ENST00000390964 IQGAP2Q13576 1575 aa-6.69□□□□□ -3.48
SNORA40.3-201ENST00000390964 DEFB104AQ8WTQ1 72 aa-6.73□□□□□ -3.49
SNORA40.3-201ENST00000390964 LINC01556Q5JQF7 62 aa-6.74□□□□□ -3.49
SNORA40.3-201ENST00000390964 H3BUX3 64 aa-6.79□□□□□ -3.5
SNORA40.3-201ENST00000390964 TOMM5Q8N4H5 51 aa-6.97□□□□□ -3.53
SNORA40.3-201ENST00000390964 UTRNP46939 3433 aa-7.16□□□□□ -3.56
SNORA40.3-201ENST00000390964 K7EIM0 57 aa-7.23□□□□□ -3.57
SNORA40.3-201ENST00000390964 APELAP0DMC3 54 aa-7.47□□□□□ -3.61
SNORA40.3-201ENST00000390964 ARHGAP5-AS1Q96IT6 56 aa-7.49□□□□□ -3.61
SNORA40.3-201ENST00000390964 A0A096LPF7 62 aa-7.51□□□□□ -3.61
SNORA40.3-201ENST00000390964 PRCDQ00LT1 54 aa-7.6□□□□□ -3.63
SNORA40.3-201ENST00000390964 TMEM167AQ8TBQ9 72 aa-7.74□□□□□ -3.65
SNORA40.3-201ENST00000390964 GCC2Q8IWJ2 1684 aa-7.83□□□□□ -3.66
SNORA40.3-201ENST00000390964 HTN3P15516 51 aa-7.95□□□□□ -3.68
SNORA40.3-201ENST00000390964 SNRPGP62308 76 aaKnown RBP-8.09□□□□□ -3.7
SNORA40.3-201ENST00000390964 GOLGB1Q14789 3259 aaKnown RBP-8.16□□□□□ -3.72
SNORA40.3-201ENST00000390964 Q9Y3F1 56 aa-8.23□□□□□ -3.73
SNORA40.3-201ENST00000390964 RPL39P5Q59GN2 51 aa-8.3□□□□□ -3.74
SNORA40.3-201ENST00000390964 DEFB108AA8MXU0 73 aa-8.46□□□□□ -3.76
SNORA40.3-201ENST00000390964 H3BSH0 61 aa-8.56□□□□□ -3.78
SNORA40.3-201ENST00000390964 COX14Q96I36 57 aa-8.84□□□□□ -3.82
SNORA40.3-201ENST00000390964 DEFB108BQ8NET1 73 aa-9.22□□□□□ -3.89
SNORA40.3-201ENST00000390964 STATHP02808 62 aa-10.36□□□□□ -4.07
Retrieved 77 of 20,778 RNA–protein pairs in 6.1 ms