RNA–Protein interactions for RNA: ENST00000389138.7

ERCC4-202, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 2,106 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-202ENST00000389138 RPL37P61927 97 aaKnown RBP2.56□□□□□ -2
ERCC4-202ENST00000389138 FCGBPQ9Y6R7 5405 aaPredicted RBP2.55□□□□□ -2
ERCC4-202ENST00000389138 MT1HP80294 61 aa2.53□□□□□ -2.01
ERCC4-202ENST00000389138 KRTAP4-1Q9BYQ7 146 aa2.53□□□□□ -2.01
ERCC4-202ENST00000389138 COX6B2Q6YFQ2 88 aa2.52□□□□□ -2.01
ERCC4-202ENST00000389138 FLGP20930 4061 aaPredicted RBP2.5□□□□□ -2.01
ERCC4-202ENST00000389138 KRTAP19-2Q3LHN2 52 aa2.49□□□□□ -2.01
ERCC4-202ENST00000389138 MUC5BQ9HC84 5762 aaPredicted RBP2.49□□□□□ -2.01
ERCC4-202ENST00000389138 H0YAA0 97 aa2.48□□□□□ -2.01
ERCC4-202ENST00000389138 LCE3EQ5T5B0 92 aa2.48□□□□□ -2.01
ERCC4-202ENST00000389138 NEBP20929 6669 aa2.47□□□□□ -2.01
ERCC4-202ENST00000389138 KRTAP12-1P59990 96 aa2.46□□□□□ -2.02
ERCC4-202ENST00000389138 S4R3F8 94 aa2.46□□□□□ -2.02
ERCC4-202ENST00000389138 H1FX-AS1Q4G0G2 97 aa2.45□□□□□ -2.02
ERCC4-202ENST00000389138 A0A0D9SG42 100 aa2.42□□□□□ -2.02
ERCC4-202ENST00000389138 M0R2T5 61 aa2.42□□□□□ -2.02
ERCC4-202ENST00000389138 KRTAP10-10P60014 251 aa2.41□□□□□ -2.02
ERCC4-202ENST00000389138 KRTAP6-3Q3LI67 103 aa2.41□□□□□ -2.02
ERCC4-202ENST00000389138 KRTAP20-1Q3LI63 56 aa2.39□□□□□ -2.03
ERCC4-202ENST00000389138 MUC12Q9UKN1 5478 aa2.39□□□□□ -2.03
ERCC4-202ENST00000389138 C10orf95Q9H7T3 257 aa2.35□□□□□ -2.03
ERCC4-202ENST00000389138 M0QZ58 72 aa2.31□□□□□ -2.04
ERCC4-202ENST00000389138 KRTAP19-6Q3LI70 58 aa2.31□□□□□ -2.04
ERCC4-202ENST00000389138 KRTAP4-3Q9BYR4 195 aa2.27□□□□□ -2.05
ERCC4-202ENST00000389138 MT2AP02795 61 aa2.27□□□□□ -2.05
ERCC4-202ENST00000389138 LCE3DQ9BYE3 92 aa2.27□□□□□ -2.05
ERCC4-202ENST00000389138 GPR98Q8WXG9 6306 aa2.26□□□□□ -2.05
ERCC4-202ENST00000389138 MDN1Q9NU22 5596 aa2.25□□□□□ -2.05
ERCC4-202ENST00000389138 MT1FP04733 61 aa2.25□□□□□ -2.05
ERCC4-202ENST00000389138 KRTAP2-3P0C7H8 128 aa2.24□□□□□ -2.05
ERCC4-202ENST00000389138 KRTAP2-4Q9BYR9 128 aa2.24□□□□□ -2.05
ERCC4-202ENST00000389138 KMT2DO14686 5537 aa2.23□□□□□ -2.05
ERCC4-202ENST00000389138 KRTAP12-4P60329 112 aa2.23□□□□□ -2.05
ERCC4-202ENST00000389138 LCE3AQ5TA76 89 aa2.21□□□□□ -2.06
ERCC4-202ENST00000389138 KRTAP5-2Q701N4 177 aa2.2□□□□□ -2.06
ERCC4-202ENST00000389138 KRTAP2-1Q9BYU5 128 aa2.14□□□□□ -2.07
ERCC4-202ENST00000389138 OBSCNQ5VST9 7968 aa2.11□□□□□ -2.07
ERCC4-202ENST00000389138 SPRR2GQ9BYE4 73 aa2.08□□□□□ -2.08
ERCC4-202ENST00000389138 SPRR2EP22531 72 aa2.07□□□□□ -2.08
ERCC4-202ENST00000389138 SPRR2BP35325 72 aa2.07□□□□□ -2.08
ERCC4-202ENST00000389138 SPRR2AP35326 72 aa2.07□□□□□ -2.08
ERCC4-202ENST00000389138 TNP1P09430 55 aa2.05□□□□□ -2.08
ERCC4-202ENST00000389138 KRTAP5-5Q701N2 237 aaPredicted RBP2.03□□□□□ -2.08
ERCC4-202ENST00000389138 SPRR2FQ96RM1 72 aa2.02□□□□□ -2.09
ERCC4-202ENST00000389138 SPRR2DP22532 72 aa2.01□□□□□ -2.09
ERCC4-202ENST00000389138 MT1BP07438 61 aa2□□□□□ -2.09
ERCC4-202ENST00000389138 KRTAP19-8Q3LI54 63 aa1.99□□□□□ -2.09
ERCC4-202ENST00000389138 DSTQ03001 7570 aaKnown RBP1.98□□□□□ -2.09
ERCC4-202ENST00000389138 MT1XP80297 61 aa1.98□□□□□ -2.09
ERCC4-202ENST00000389138 KRTAP12-3P60328 96 aa1.97□□□□□ -2.09
ERCC4-202ENST00000389138 AHNAK2Q8IVF2 5795 aa1.96□□□□□ -2.1
ERCC4-202ENST00000389138 LCE1CQ5T751 118 aa1.94□□□□□ -2.1
ERCC4-202ENST00000389138 LCE1BQ5T7P3 118 aa1.94□□□□□ -2.1
ERCC4-202ENST00000389138 KRTAP5-8O75690 187 aa1.92□□□□□ -2.1
ERCC4-202ENST00000389138 KRTAP8-1Q8IUC2 63 aa1.9□□□□□ -2.1
ERCC4-202ENST00000389138 KRTAP5-10Q6L8G5 202 aa1.9□□□□□ -2.11
ERCC4-202ENST00000389138 KRTAP5-7Q6L8G8 165 aa1.87□□□□□ -2.11
ERCC4-202ENST00000389138 KRTAP19-5Q3LI72 72 aa1.84□□□□□ -2.11
ERCC4-202ENST00000389138 AHNAKQ09666 5890 aaKnown RBP1.79□□□□□ -2.12
ERCC4-202ENST00000389138 MT4P47944 62 aa1.78□□□□□ -2.13
ERCC4-202ENST00000389138 KRTAP19-7Q3SYF9 63 aa1.76□□□□□ -2.13
ERCC4-202ENST00000389138 MT1EP04732 61 aa1.71□□□□□ -2.14
ERCC4-202ENST00000389138 MT1LQ93083 61 aa1.7□□□□□ -2.14
ERCC4-202ENST00000389138 MUC5ACP98088 5654 aa1.66□□□□□ -2.14
ERCC4-202ENST00000389138 KRTAP19-3Q7Z4W3 81 aa1.64□□□□□ -2.15
ERCC4-202ENST00000389138 MT1GP13640 62 aa1.63□□□□□ -2.15
ERCC4-202ENST00000389138 MT1MQ8N339 61 aa1.61□□□□□ -2.15
ERCC4-202ENST00000389138 KRTAP20-2Q3LI61 65 aa1.59□□□□□ -2.15
ERCC4-202ENST00000389138 SYNE1Q8NF91 8797 aaKnown RBP1.54□□□□□ -2.16
ERCC4-202ENST00000389138 MUC19Q7Z5P9 8384 aa1.5□□□□□ -2.17
ERCC4-202ENST00000389138 KRTAP6-1Q3LI64 71 aa1.46□□□□□ -2.18
ERCC4-202ENST00000389138 MT1AP04731 61 aa1.41□□□□□ -2.18
ERCC4-202ENST00000389138 PRM1P04553 51 aa1.39□□□□□ -2.19
ERCC4-202ENST00000389138 KRTAP21-2Q3LI59 83 aa1.35□□□□□ -2.19
ERCC4-202ENST00000389138 KRTAP6-2Q3LI66 62 aa1.33□□□□□ -2.2
ERCC4-202ENST00000389138 PHGR1C9JFL3 82 aa1.12□□□□□ -2.23
ERCC4-202ENST00000389138 KRTAP21-1Q3LI58 79 aa1.1□□□□□ -2.23
ERCC4-202ENST00000389138 MUC16Q8WXI7 14507 aa0.7□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 46.6 ms