RNA–Protein interactions for RNA: ENST00000381535.4

SYNGR1-204, Transcript of synaptogyrin 1, humanhuman

TSL 1 (best) BASIC

Gene SYNGR1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-204ENST00000381535 KRTAP4-11Q9BYQ6 195 aa5.8□□□□□ -1.48
SYNGR1-204ENST00000381535 KRTAP15-1Q3LI76 137 aa5.78□□□□□ -1.48
SYNGR1-204ENST00000381535 KRTAP10-7P60409 375 aaPredicted RBP5.77□□□□□ -1.49
SYNGR1-204ENST00000381535 PP632Q6XCG6 107 aa5.74□□□□□ -1.49
SYNGR1-204ENST00000381535 KRTAP10-12P60413 245 aa5.7□□□□□ -1.5
SYNGR1-204ENST00000381535 LCE3AQ5TA76 89 aa5.68□□□□□ -1.5
SYNGR1-204ENST00000381535 NEBP20929 6669 aa5.63□□□□□ -1.51
SYNGR1-204ENST00000381535 KRTAP5-9P26371 169 aa5.59□□□□□ -1.51
SYNGR1-204ENST00000381535 MUC12Q9UKN1 5478 aa5.59□□□□□ -1.51
SYNGR1-204ENST00000381535 KRTAP8-1Q8IUC2 63 aa5.56□□□□□ -1.52
SYNGR1-204ENST00000381535 KMT2DO14686 5537 aa5.51□□□□□ -1.53
SYNGR1-204ENST00000381535 KRTAP12-3P60328 96 aa5.46□□□□□ -1.54
SYNGR1-204ENST00000381535 MDN1Q9NU22 5596 aa5.46□□□□□ -1.54
SYNGR1-204ENST00000381535 KRTAP20-1Q3LI63 56 aa5.45□□□□□ -1.54
SYNGR1-204ENST00000381535 KRTAP19-5Q3LI72 72 aa5.45□□□□□ -1.54
SYNGR1-204ENST00000381535 KRTAP19-7Q3SYF9 63 aa5.35□□□□□ -1.55
SYNGR1-204ENST00000381535 SPRR2FQ96RM1 72 aa5.34□□□□□ -1.55
SYNGR1-204ENST00000381535 KRTAP2-3P0C7H8 128 aa5.32□□□□□ -1.56
SYNGR1-204ENST00000381535 KRTAP2-4Q9BYR9 128 aa5.32□□□□□ -1.56
SYNGR1-204ENST00000381535 SPRR2EP22531 72 aa5.28□□□□□ -1.56
SYNGR1-204ENST00000381535 SPRR2BP35325 72 aa5.28□□□□□ -1.56
SYNGR1-204ENST00000381535 SPRR2AP35326 72 aa5.28□□□□□ -1.56
SYNGR1-204ENST00000381535 MT1EP04732 61 aa5.27□□□□□ -1.57
SYNGR1-204ENST00000381535 LCE1AQ5T7P2 110 aa5.25□□□□□ -1.57
SYNGR1-204ENST00000381535 MT1LQ93083 61 aa5.16□□□□□ -1.58
SYNGR1-204ENST00000381535 KRTAP2-2Q9BYT5 123 aa5.15□□□□□ -1.59
SYNGR1-204ENST00000381535 KRTAP2-1Q9BYU5 128 aa5.15□□□□□ -1.59
SYNGR1-204ENST00000381535 KRTAP5-3Q6L8H2 238 aa5.13□□□□□ -1.59
SYNGR1-204ENST00000381535 SPRR2DP22532 72 aa5.1□□□□□ -1.59
SYNGR1-204ENST00000381535 LCE3CQ5T5A8 94 aa5.1□□□□□ -1.59
SYNGR1-204ENST00000381535 KRTAP19-3Q7Z4W3 81 aa5.07□□□□□ -1.6
SYNGR1-204ENST00000381535 SPRR5A0A1B0GTR4 108 aa5.06□□□□□ -1.6
SYNGR1-204ENST00000381535 MT1GP13640 62 aa5.04□□□□□ -1.6
SYNGR1-204ENST00000381535 MT1MQ8N339 61 aa4.97□□□□□ -1.61
SYNGR1-204ENST00000381535 LUZP6Q538Z0 58 aa4.91□□□□□ -1.62
SYNGR1-204ENST00000381535 KRTAP4-3Q9BYR4 195 aa4.88□□□□□ -1.63
SYNGR1-204ENST00000381535 DSTQ03001 7570 aaKnown RBP4.83□□□□□ -1.64
SYNGR1-204ENST00000381535 KRTAP9-6A8MVA2 160 aa4.8□□□□□ -1.64
SYNGR1-204ENST00000381535 NDUFAF8A1L188 74 aa4.78□□□□□ -1.64
SYNGR1-204ENST00000381535 GPR98Q8WXG9 6306 aa4.6□□□□□ -1.67
SYNGR1-204ENST00000381535 HMCN1Q96RW7 5635 aa4.48□□□□□ -1.69
SYNGR1-204ENST00000381535 MT3P25713 68 aa4.47□□□□□ -1.69
SYNGR1-204ENST00000381535 MT4P47944 62 aa4.47□□□□□ -1.69
SYNGR1-204ENST00000381535 KRTAP5-4Q6L8H1 288 aa4.47□□□□□ -1.69
SYNGR1-204ENST00000381535 KRTAP5-5Q701N2 237 aaPredicted RBP4.45□□□□□ -1.7
SYNGR1-204ENST00000381535 MT1AP04731 61 aa4.39□□□□□ -1.71
SYNGR1-204ENST00000381535 KRTAP6-1Q3LI64 71 aa4.35□□□□□ -1.71
SYNGR1-204ENST00000381535 SYNE1Q8NF91 8797 aaKnown RBP4.34□□□□□ -1.71
SYNGR1-204ENST00000381535 KRTAP5-10Q6L8G5 202 aa4.31□□□□□ -1.72
SYNGR1-204ENST00000381535 AHNAK2Q8IVF2 5795 aa4.3□□□□□ -1.72
SYNGR1-204ENST00000381535 KRTAP20-2Q3LI61 65 aa4.19□□□□□ -1.74
SYNGR1-204ENST00000381535 LCE1FQ5T754 118 aa4.19□□□□□ -1.74
SYNGR1-204ENST00000381535 KRTAP12-4P60329 112 aa4.18□□□□□ -1.74
SYNGR1-204ENST00000381535 KRTAP5-7Q6L8G8 165 aa4.15□□□□□ -1.75
SYNGR1-204ENST00000381535 KRTAP6-2Q3LI66 62 aa4.01□□□□□ -1.77
SYNGR1-204ENST00000381535 KRTAP5-11Q6L8G4 156 aa3.96□□□□□ -1.78
SYNGR1-204ENST00000381535 INE1O15225 51 aa3.94□□□□□ -1.78
SYNGR1-204ENST00000381535 LCE1EQ5T753 118 aa3.92□□□□□ -1.78
SYNGR1-204ENST00000381535 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.91□□□□□ -1.78
SYNGR1-204ENST00000381535 KRTAP5-2Q701N4 177 aa3.9□□□□□ -1.79
SYNGR1-204ENST00000381535 LCE3DQ9BYE3 92 aa3.83□□□□□ -1.8
SYNGR1-204ENST00000381535 OBSCNQ5VST9 7968 aa3.74□□□□□ -1.81
SYNGR1-204ENST00000381535 KRTAP5-8O75690 187 aa3.74□□□□□ -1.81
SYNGR1-204ENST00000381535 LCE3EQ5T5B0 92 aa3.73□□□□□ -1.81
SYNGR1-204ENST00000381535 MUC5ACP98088 5654 aa3.57□□□□□ -1.84
SYNGR1-204ENST00000381535 MUC5BQ9HC84 5762 aaPredicted RBP3.57□□□□□ -1.84
SYNGR1-204ENST00000381535 AHNAKQ09666 5890 aaKnown RBP3.53□□□□□ -1.84
SYNGR1-204ENST00000381535 KRTAP5-1Q6L8H4 278 aa3.52□□□□□ -1.85
SYNGR1-204ENST00000381535 LCE1BQ5T7P3 118 aa3.27□□□□□ -1.89
SYNGR1-204ENST00000381535 KRTAP4-4Q9BYR3 166 aa3.27□□□□□ -1.89
SYNGR1-204ENST00000381535 PRM1P04553 51 aa3.24□□□□□ -1.89
SYNGR1-204ENST00000381535 LCE1CQ5T751 118 aa3.22□□□□□ -1.89
SYNGR1-204ENST00000381535 KRTAP21-2Q3LI59 83 aa2.85□□□□□ -1.95
SYNGR1-204ENST00000381535 PHGR1C9JFL3 82 aa2.47□□□□□ -2.01
SYNGR1-204ENST00000381535 MUC19Q7Z5P9 8384 aa2.3□□□□□ -2.04
SYNGR1-204ENST00000381535 KRTAP21-1Q3LI58 79 aa1.97□□□□□ -2.09
SYNGR1-204ENST00000381535 MUC16Q8WXI7 14507 aa1.65□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 49.3 ms