RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 KRTAP8-1Q8IUC2 63 aa4.71□□□□□ -1.66
PCNA-201ENST00000379143 A6NED7 52 aa4.69□□□□□ -1.66
PCNA-201ENST00000379143 K7ERS5 55 aa4.69□□□□□ -1.66
PCNA-201ENST00000379143 SPRR2EP22531 72 aa4.66□□□□□ -1.66
PCNA-201ENST00000379143 SPRR2BP35325 72 aa4.66□□□□□ -1.66
PCNA-201ENST00000379143 SPRR2AP35326 72 aa4.66□□□□□ -1.66
PCNA-201ENST00000379143 KRTAP2-2Q9BYT5 123 aa4.66□□□□□ -1.66
PCNA-201ENST00000379143 KRTAP2-1Q9BYU5 128 aa4.66□□□□□ -1.66
PCNA-201ENST00000379143 SPRR2FQ96RM1 72 aa4.64□□□□□ -1.67
PCNA-201ENST00000379143 C10orf95Q9H7T3 257 aa4.61□□□□□ -1.67
PCNA-201ENST00000379143 TNP1P09430 55 aa4.6□□□□□ -1.67
PCNA-201ENST00000379143 LCE1AQ5T7P2 110 aa4.55□□□□□ -1.68
PCNA-201ENST00000379143 CDC42SE1Q9NRR8 79 aa4.54□□□□□ -1.68
PCNA-201ENST00000379143 SPRR2DP22532 72 aa4.5□□□□□ -1.69
PCNA-201ENST00000379143 KRTAP25-1Q3LHN0 102 aa4.47□□□□□ -1.69
PCNA-201ENST00000379143 KRTAP19-7Q3SYF9 63 aa4.46□□□□□ -1.7
PCNA-201ENST00000379143 LCE3AQ5TA76 89 aa4.44□□□□□ -1.7
PCNA-201ENST00000379143 KRTAP19-5Q3LI72 72 aa4.41□□□□□ -1.7
PCNA-201ENST00000379143 MT1EP04732 61 aa4.4□□□□□ -1.71
PCNA-201ENST00000379143 A0A0A0MQY5 61 aa4.39□□□□□ -1.71
PCNA-201ENST00000379143 GPR98Q8WXG9 6306 aa4.39□□□□□ -1.71
PCNA-201ENST00000379143 ROMO1P60602 79 aa4.37□□□□□ -1.71
PCNA-201ENST00000379143 KRTAP19-3Q7Z4W3 81 aa4.33□□□□□ -1.72
PCNA-201ENST00000379143 BRK1Q8WUW1 75 aa4.31□□□□□ -1.72
PCNA-201ENST00000379143 KRTAP12-3P60328 96 aa4.29□□□□□ -1.72
PCNA-201ENST00000379143 DSTQ03001 7570 aaKnown RBP4.29□□□□□ -1.72
PCNA-201ENST00000379143 MT1GP13640 62 aa4.27□□□□□ -1.73
PCNA-201ENST00000379143 PP632Q6XCG6 107 aa4.26□□□□□ -1.73
PCNA-201ENST00000379143 MT1LQ93083 61 aa4.25□□□□□ -1.73
PCNA-201ENST00000379143 MT1MQ8N339 61 aa4.18□□□□□ -1.74
PCNA-201ENST00000379143 PRO0628Q9UI54 55 aa4.1□□□□□ -1.75
PCNA-201ENST00000379143 PMAIP1Q13794 54 aa4.08□□□□□ -1.76
PCNA-201ENST00000379143 MT3P25713 68 aa4.05□□□□□ -1.76
PCNA-201ENST00000379143 HMCN1Q96RW7 5635 aa4.04□□□□□ -1.76
PCNA-201ENST00000379143 KRTAP4-3Q9BYR4 195 aa4.02□□□□□ -1.77
PCNA-201ENST00000379143 KRTAP5-10Q6L8G5 202 aa4□□□□□ -1.77
PCNA-201ENST00000379143 AHNAK2Q8IVF2 5795 aa3.99□□□□□ -1.77
PCNA-201ENST00000379143 LCE3CQ5T5A8 94 aa3.98□□□□□ -1.77
PCNA-201ENST00000379143 MT4P47944 62 aa3.97□□□□□ -1.77
PCNA-201ENST00000379143 KRTAP5-7Q6L8G8 165 aa3.89□□□□□ -1.79
PCNA-201ENST00000379143 KRTAP5-4Q6L8H1 288 aa3.84□□□□□ -1.79
PCNA-201ENST00000379143 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.81□□□□□ -1.8
PCNA-201ENST00000379143 PRAC1Q96KF2 57 aa3.81□□□□□ -1.8
PCNA-201ENST00000379143 KRTAP5-5Q701N2 237 aaPredicted RBP3.8□□□□□ -1.8
PCNA-201ENST00000379143 KTN1-AS1Q86SY8 53 aa3.79□□□□□ -1.8
PCNA-201ENST00000379143 LCE1EQ5T753 118 aa3.77□□□□□ -1.81
PCNA-201ENST00000379143 KRTAP5-11Q6L8G4 156 aa3.77□□□□□ -1.81
PCNA-201ENST00000379143 SPRR5A0A1B0GTR4 108 aa3.72□□□□□ -1.81
PCNA-201ENST00000379143 KRTAP9-6A8MVA2 160 aa3.7□□□□□ -1.82
PCNA-201ENST00000379143 KRTAP12-4P60329 112 aa3.68□□□□□ -1.82
PCNA-201ENST00000379143 LCE1FQ5T754 118 aa3.67□□□□□ -1.82
PCNA-201ENST00000379143 KRTAP20-2Q3LI61 65 aa3.65□□□□□ -1.83
PCNA-201ENST00000379143 MT1AP04731 61 aa3.63□□□□□ -1.83
PCNA-201ENST00000379143 NDUFAF8A1L188 74 aa3.59□□□□□ -1.83
PCNA-201ENST00000379143 KRTAP6-1Q3LI64 71 aa3.57□□□□□ -1.84
PCNA-201ENST00000379143 SYNE1Q8NF91 8797 aaKnown RBP3.51□□□□□ -1.85
PCNA-201ENST00000379143 KRTAP5-2Q701N4 177 aa3.41□□□□□ -1.86
PCNA-201ENST00000379143 MUC5ACP98088 5654 aa3.39□□□□□ -1.87
PCNA-201ENST00000379143 KRTAP6-2Q3LI66 62 aa3.37□□□□□ -1.87
PCNA-201ENST00000379143 MUC5BQ9HC84 5762 aaPredicted RBP3.36□□□□□ -1.87
PCNA-201ENST00000379143 AHNAKQ09666 5890 aaKnown RBP3.35□□□□□ -1.87
PCNA-201ENST00000379143 KRTAP5-8O75690 187 aa3.33□□□□□ -1.88
PCNA-201ENST00000379143 KRTAP5-1Q6L8H4 278 aa3.31□□□□□ -1.88
PCNA-201ENST00000379143 LUZP6Q538Z0 58 aa3.26□□□□□ -1.89
PCNA-201ENST00000379143 OBSCNQ5VST9 7968 aa3.22□□□□□ -1.89
PCNA-201ENST00000379143 KRTAP4-4Q9BYR3 166 aa3.19□□□□□ -1.9
PCNA-201ENST00000379143 LCE3EQ5T5B0 92 aa3.17□□□□□ -1.9
PCNA-201ENST00000379143 LCE3DQ9BYE3 92 aa2.93□□□□□ -1.94
PCNA-201ENST00000379143 LCE1CQ5T751 118 aa2.78□□□□□ -1.96
PCNA-201ENST00000379143 LCE1BQ5T7P3 118 aa2.78□□□□□ -1.96
PCNA-201ENST00000379143 INE1O15225 51 aa2.46□□□□□ -2.02
PCNA-201ENST00000379143 KRTAP21-2Q3LI59 83 aa2.35□□□□□ -2.03
PCNA-201ENST00000379143 PHGR1C9JFL3 82 aa2.34□□□□□ -2.04
PCNA-201ENST00000379143 PRM1P04553 51 aa2.22□□□□□ -2.05
PCNA-201ENST00000379143 MUC19Q7Z5P9 8384 aa2.01□□□□□ -2.09
PCNA-201ENST00000379143 KRTAP21-1Q3LI58 79 aa1.77□□□□□ -2.13
PCNA-201ENST00000379143 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 47.4 ms