RNA–Protein interactions for RNA: ENST00000376899.8

YIF1A-202, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 1,042 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-202ENST00000376899 LCE5AQ5TCM9 118 aa8.24□□□□□ -1.09
YIF1A-202ENST00000376899 CDC42SE1Q9NRR8 79 aa8.19□□□□□ -1.1
YIF1A-202ENST00000376899 LCE3BQ5TA77 95 aa8.12□□□□□ -1.11
YIF1A-202ENST00000376899 KRTAP2-2Q9BYT5 123 aa8.12□□□□□ -1.11
YIF1A-202ENST00000376899 KRTAP2-1Q9BYU5 128 aa8.12□□□□□ -1.11
YIF1A-202ENST00000376899 MT1GP13640 62 aa8.1□□□□□ -1.11
YIF1A-202ENST00000376899 MT1LQ93083 61 aa8.1□□□□□ -1.11
YIF1A-202ENST00000376899 KRTAP12-3P60328 96 aa8.04□□□□□ -1.12
YIF1A-202ENST00000376899 PP632Q6XCG6 107 aa8.01□□□□□ -1.13
YIF1A-202ENST00000376899 KRTAP23-1A1A580 65 aa8□□□□□ -1.13
YIF1A-202ENST00000376899 ROMO1P60602 79 aa7.97□□□□□ -1.13
YIF1A-202ENST00000376899 MT1MQ8N339 61 aa7.97□□□□□ -1.13
YIF1A-202ENST00000376899 PRO0628Q9UI54 55 aa7.87□□□□□ -1.15
YIF1A-202ENST00000376899 DSTQ03001 7570 aaKnown RBP7.84□□□□□ -1.15
YIF1A-202ENST00000376899 KRTAP4-3Q9BYR4 195 aa7.75□□□□□ -1.17
YIF1A-202ENST00000376899 BRK1Q8WUW1 75 aa7.73□□□□□ -1.17
YIF1A-202ENST00000376899 KRTAP4-7Q9BYR0 210 aa7.69□□□□□ -1.18
YIF1A-202ENST00000376899 KRTAP19-4Q3LI73 84 aa7.66□□□□□ -1.18
YIF1A-202ENST00000376899 KRTAP15-1Q3LI76 137 aa7.65□□□□□ -1.18
YIF1A-202ENST00000376899 LCE4AQ5TA78 99 aa7.46□□□□□ -1.22
YIF1A-202ENST00000376899 LCE3CQ5T5A8 94 aa7.45□□□□□ -1.22
YIF1A-202ENST00000376899 KRTAP5-4Q6L8H1 288 aa7.42□□□□□ -1.22
YIF1A-202ENST00000376899 KRTAP4-9Q9BYQ8 210 aa7.42□□□□□ -1.22
YIF1A-202ENST00000376899 PMAIP1Q13794 54 aa7.35□□□□□ -1.23
YIF1A-202ENST00000376899 LCE1DQ5T752 114 aa7.33□□□□□ -1.24
YIF1A-202ENST00000376899 KRTAP5-5Q701N2 237 aaPredicted RBP7.31□□□□□ -1.24
YIF1A-202ENST00000376899 GPR98Q8WXG9 6306 aa7.29□□□□□ -1.24
YIF1A-202ENST00000376899 MT4P47944 62 aa7.27□□□□□ -1.25
YIF1A-202ENST00000376899 LOC100996750A0A140TA64 210 aa7.26□□□□□ -1.25
YIF1A-202ENST00000376899 KTN1-AS1Q86SY8 53 aa7.21□□□□□ -1.26
YIF1A-202ENST00000376899 KRTAP4-6Q9BYQ5 205 aa7.13□□□□□ -1.27
YIF1A-202ENST00000376899 HMCN1Q96RW7 5635 aa7.11□□□□□ -1.27
YIF1A-202ENST00000376899 KRTAP9-6A8MVA2 160 aa7.04□□□□□ -1.28
YIF1A-202ENST00000376899 SPRR5A0A1B0GTR4 108 aa6.97□□□□□ -1.29
YIF1A-202ENST00000376899 KRTAP12-4P60329 112 aa6.97□□□□□ -1.29
YIF1A-202ENST00000376899 KRTAP20-2Q3LI61 65 aa6.94□□□□□ -1.3
YIF1A-202ENST00000376899 MT1AP04731 61 aa6.9□□□□□ -1.3
YIF1A-202ENST00000376899 SYNE1Q8NF91 8797 aaKnown RBP6.9□□□□□ -1.31
YIF1A-202ENST00000376899 PRAC1Q96KF2 57 aa6.88□□□□□ -1.31
YIF1A-202ENST00000376899 KRTAP6-1Q3LI64 71 aa6.83□□□□□ -1.32
YIF1A-202ENST00000376899 AHNAK2Q8IVF2 5795 aa6.81□□□□□ -1.32
YIF1A-202ENST00000376899 KRTAP5-10Q6L8G5 202 aa6.78□□□□□ -1.32
YIF1A-202ENST00000376899 KRTAP5-3Q6L8H2 238 aa6.75□□□□□ -1.33
YIF1A-202ENST00000376899 KRTAP9-4Q9BYQ2 154 aa6.62□□□□□ -1.35
YIF1A-202ENST00000376899 KRTAP5-2Q701N4 177 aa6.57□□□□□ -1.36
YIF1A-202ENST00000376899 KRTAP5-7Q6L8G8 165 aa6.52□□□□□ -1.37
YIF1A-202ENST00000376899 KRTAP6-2Q3LI66 62 aa6.43□□□□□ -1.38
YIF1A-202ENST00000376899 MT3P25713 68 aa6.28□□□□□ -1.4
YIF1A-202ENST00000376899 KRTAP4-11Q9BYQ6 195 aa6.24□□□□□ -1.41
YIF1A-202ENST00000376899 KRTAP5-8O75690 187 aa6.03□□□□□ -1.44
YIF1A-202ENST00000376899 KRTAP4-12Q9BQ66 201 aa5.95□□□□□ -1.46
YIF1A-202ENST00000376899 OBSCNQ5VST9 7968 aa5.94□□□□□ -1.46
YIF1A-202ENST00000376899 KRTAP9-9Q9BYP9 154 aa5.82□□□□□ -1.48
YIF1A-202ENST00000376899 KRTAP5-1Q6L8H4 278 aa5.81□□□□□ -1.48
YIF1A-202ENST00000376899 H3BS24 57 aa5.74□□□□□ -1.49
YIF1A-202ENST00000376899 LUZP6Q538Z0 58 aa5.73□□□□□ -1.49
YIF1A-202ENST00000376899 LCE1EQ5T753 118 aa5.7□□□□□ -1.5
YIF1A-202ENST00000376899 NDUFAF8A1L188 74 aa5.65□□□□□ -1.5
YIF1A-202ENST00000376899 MUC5ACP98088 5654 aa5.63□□□□□ -1.51
YIF1A-202ENST00000376899 MUC5BQ9HC84 5762 aaPredicted RBP5.62□□□□□ -1.51
YIF1A-202ENST00000376899 AHNAKQ09666 5890 aaKnown RBP5.59□□□□□ -1.52
YIF1A-202ENST00000376899 LCE3DQ9BYE3 92 aa5.43□□□□□ -1.54
YIF1A-202ENST00000376899 KRTAP4-2Q9BYR5 136 aa5.36□□□□□ -1.55
YIF1A-202ENST00000376899 LCE1CQ5T751 118 aa5.29□□□□□ -1.56
YIF1A-202ENST00000376899 LCE1BQ5T7P3 118 aa5.29□□□□□ -1.56
YIF1A-202ENST00000376899 LCE3EQ5T5B0 92 aa5.19□□□□□ -1.58
YIF1A-202ENST00000376899 A0A0A0MQY5 61 aa5.18□□□□□ -1.58
YIF1A-202ENST00000376899 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.89□□□□□ -1.63
YIF1A-202ENST00000376899 INE1O15225 51 aa4.8□□□□□ -1.64
YIF1A-202ENST00000376899 KRTAP5-11Q6L8G4 156 aa4.77□□□□□ -1.65
YIF1A-202ENST00000376899 LCE1FQ5T754 118 aa4.54□□□□□ -1.68
YIF1A-202ENST00000376899 KRTAP21-2Q3LI59 83 aa4.5□□□□□ -1.69
YIF1A-202ENST00000376899 PHGR1C9JFL3 82 aa4.09□□□□□ -1.75
YIF1A-202ENST00000376899 PRM1P04553 51 aa4.09□□□□□ -1.75
YIF1A-202ENST00000376899 KRTAP4-4Q9BYR3 166 aa4.02□□□□□ -1.77
YIF1A-202ENST00000376899 MUC19Q7Z5P9 8384 aa3.65□□□□□ -1.83
YIF1A-202ENST00000376899 KRTAP21-1Q3LI58 79 aa2.95□□□□□ -1.94
YIF1A-202ENST00000376899 MUC16Q8WXI7 14507 aa2.61□□□□□ -1.99
Retrieved 78 of 20,778 RNA–protein pairs in 181.5 ms