RNA–Protein interactions for RNA: ENST00000376802.2

HLA-A-201, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,334 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-201ENST00000376802 KRTAP19-7Q3SYF9 63 aa6.58□□□□□ -1.36
HLA-A-201ENST00000376802 KRTAP13-4Q3LI77 160 aa6.56□□□□□ -1.36
HLA-A-201ENST00000376802 A0A1B0GU33 70 aa6.52□□□□□ -1.37
HLA-A-201ENST00000376802 MT1EP04732 61 aa6.52□□□□□ -1.37
HLA-A-201ENST00000376802 KRTAP19-3Q7Z4W3 81 aa6.51□□□□□ -1.37
HLA-A-201ENST00000376802 PMAIP1Q13794 54 aa6.5□□□□□ -1.37
HLA-A-201ENST00000376802 UQCR11O14957 56 aa6.49□□□□□ -1.37
HLA-A-201ENST00000376802 CAMK2N1Q7Z7J9 78 aa6.48□□□□□ -1.37
HLA-A-201ENST00000376802 CDC42SE1Q9NRR8 79 aa6.44□□□□□ -1.38
HLA-A-201ENST00000376802 A6NED7 52 aa6.43□□□□□ -1.38
HLA-A-201ENST00000376802 MIR22HGQ0VDD5 57 aa6.38□□□□□ -1.39
HLA-A-201ENST00000376802 SPATA8Q6RVD6 105 aa6.37□□□□□ -1.39
HLA-A-201ENST00000376802 KTN1-AS1Q86SY8 53 aa6.35□□□□□ -1.39
HLA-A-201ENST00000376802 MT1GP13640 62 aa6.33□□□□□ -1.4
HLA-A-201ENST00000376802 KRTAP5-3Q6L8H2 238 aa6.33□□□□□ -1.4
HLA-A-201ENST00000376802 KRTAP19-5Q3LI72 72 aa6.32□□□□□ -1.4
HLA-A-201ENST00000376802 A0A0D9SG42 100 aa6.31□□□□□ -1.4
HLA-A-201ENST00000376802 HMCN1Q96RW7 5635 aa6.26□□□□□ -1.41
HLA-A-201ENST00000376802 A8MU10 97 aa6.25□□□□□ -1.41
HLA-A-201ENST00000376802 MT4P47944 62 aa6.24□□□□□ -1.41
HLA-A-201ENST00000376802 PP632Q6XCG6 107 aa6.24□□□□□ -1.41
HLA-A-201ENST00000376802 MT1MQ8N339 61 aa6.23□□□□□ -1.41
HLA-A-201ENST00000376802 MT1LQ93083 61 aa6.2□□□□□ -1.42
HLA-A-201ENST00000376802 KRTAP12-1P59990 96 aa6.18□□□□□ -1.42
HLA-A-201ENST00000376802 SPINT4Q6UDR6 99 aa6.18□□□□□ -1.42
HLA-A-201ENST00000376802 K7ERS5 55 aa6.15□□□□□ -1.43
HLA-A-201ENST00000376802 AHNAK2Q8IVF2 5795 aa6.14□□□□□ -1.43
HLA-A-201ENST00000376802 KRTAP5-4Q6L8H1 288 aa6.14□□□□□ -1.43
HLA-A-201ENST00000376802 KRTAP4-3Q9BYR4 195 aa6.13□□□□□ -1.43
HLA-A-201ENST00000376802 KRTAP5-10Q6L8G5 202 aa6.07□□□□□ -1.44
HLA-A-201ENST00000376802 C10orf95Q9H7T3 257 aa6.04□□□□□ -1.44
HLA-A-201ENST00000376802 LCE3AQ5TA76 89 aa6.02□□□□□ -1.45
HLA-A-201ENST00000376802 TNP1P09430 55 aa5.91□□□□□ -1.46
HLA-A-201ENST00000376802 KRTAP23-1A1A580 65 aa5.89□□□□□ -1.47
HLA-A-201ENST00000376802 KRTAP5-7Q6L8G8 165 aa5.87□□□□□ -1.47
HLA-A-201ENST00000376802 ROMO1P60602 79 aa5.85□□□□□ -1.47
HLA-A-201ENST00000376802 KRTAP15-1Q3LI76 137 aa5.85□□□□□ -1.47
HLA-A-201ENST00000376802 KRTAP20-2Q3LI61 65 aa5.79□□□□□ -1.48
HLA-A-201ENST00000376802 PRAC1Q96KF2 57 aa5.79□□□□□ -1.48
HLA-A-201ENST00000376802 KRTAP12-3P60328 96 aa5.78□□□□□ -1.48
HLA-A-201ENST00000376802 KRTAP5-5Q701N2 237 aaPredicted RBP5.76□□□□□ -1.49
HLA-A-201ENST00000376802 KRTAP25-1Q3LHN0 102 aa5.74□□□□□ -1.49
HLA-A-201ENST00000376802 SPRR5A0A1B0GTR4 108 aa5.72□□□□□ -1.49
HLA-A-201ENST00000376802 KRTAP12-4P60329 112 aa5.63□□□□□ -1.51
HLA-A-201ENST00000376802 SYNE1Q8NF91 8797 aaKnown RBP5.56□□□□□ -1.52
HLA-A-201ENST00000376802 KRTAP5-2Q701N4 177 aa5.33□□□□□ -1.56
HLA-A-201ENST00000376802 LCE3CQ5T5A8 94 aa5.31□□□□□ -1.56
HLA-A-201ENST00000376802 KRTAP6-1Q3LI64 71 aa5.25□□□□□ -1.57
HLA-A-201ENST00000376802 MT1AP04731 61 aa5.24□□□□□ -1.57
HLA-A-201ENST00000376802 KRTAP5-8O75690 187 aa5.21□□□□□ -1.58
HLA-A-201ENST00000376802 A0A0A0MQY5 61 aa5.14□□□□□ -1.59
HLA-A-201ENST00000376802 MUC5ACP98088 5654 aa5.13□□□□□ -1.59
HLA-A-201ENST00000376802 AHNAKQ09666 5890 aaKnown RBP5.12□□□□□ -1.59
HLA-A-201ENST00000376802 KRTAP6-2Q3LI66 62 aa5.08□□□□□ -1.6
HLA-A-201ENST00000376802 MUC5BQ9HC84 5762 aaPredicted RBP5.08□□□□□ -1.6
HLA-A-201ENST00000376802 KRTAP9-6A8MVA2 160 aa5.07□□□□□ -1.6
HLA-A-201ENST00000376802 OBSCNQ5VST9 7968 aa5.04□□□□□ -1.6
HLA-A-201ENST00000376802 NDUFAF8A1L188 74 aa4.97□□□□□ -1.61
HLA-A-201ENST00000376802 LUZP6Q538Z0 58 aa4.88□□□□□ -1.63
HLA-A-201ENST00000376802 KRTAP5-1Q6L8H4 278 aa4.83□□□□□ -1.64
HLA-A-201ENST00000376802 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.8□□□□□ -1.64
HLA-A-201ENST00000376802 MT3P25713 68 aa4.79□□□□□ -1.64
HLA-A-201ENST00000376802 KRTAP5-11Q6L8G4 156 aa4.76□□□□□ -1.65
HLA-A-201ENST00000376802 LCE1EQ5T753 118 aa4.61□□□□□ -1.67
HLA-A-201ENST00000376802 INE1O15225 51 aa4.31□□□□□ -1.72
HLA-A-201ENST00000376802 LCE1BQ5T7P3 118 aa4.24□□□□□ -1.73
HLA-A-201ENST00000376802 LCE1CQ5T751 118 aa4.19□□□□□ -1.74
HLA-A-201ENST00000376802 LCE1FQ5T754 118 aa3.97□□□□□ -1.77
HLA-A-201ENST00000376802 KRTAP4-4Q9BYR3 166 aa3.97□□□□□ -1.77
HLA-A-201ENST00000376802 LCE3DQ9BYE3 92 aa3.75□□□□□ -1.81
HLA-A-201ENST00000376802 LCE3EQ5T5B0 92 aa3.56□□□□□ -1.84
HLA-A-201ENST00000376802 PHGR1C9JFL3 82 aa3.52□□□□□ -1.85
HLA-A-201ENST00000376802 KRTAP21-2Q3LI59 83 aa3.48□□□□□ -1.85
HLA-A-201ENST00000376802 MUC19Q7Z5P9 8384 aa3.12□□□□□ -1.91
HLA-A-201ENST00000376802 PRM1P04553 51 aa3□□□□□ -1.93
HLA-A-201ENST00000376802 KRTAP21-1Q3LI58 79 aa2.67□□□□□ -1.98
HLA-A-201ENST00000376802 MUC16Q8WXI7 14507 aa2.2□□□□□ -2.06
Retrieved 77 of 20,778 RNA–protein pairs in 86 ms