RNA–Protein interactions for RNA: ENST00000375780.6

CLIC1-207, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC1, Length 1,560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-207ENST00000375780 MUC12Q9UKN1 5478 aa4.79□□□□□ -1.64
CLIC1-207ENST00000375780 KRTAP8-1Q8IUC2 63 aa4.78□□□□□ -1.64
CLIC1-207ENST00000375780 KRTAP10-7P60409 375 aaPredicted RBP4.77□□□□□ -1.65
CLIC1-207ENST00000375780 KRTAP10-12P60413 245 aa4.77□□□□□ -1.65
CLIC1-207ENST00000375780 SPRR2FQ96RM1 72 aa4.74□□□□□ -1.65
CLIC1-207ENST00000375780 LCE5AQ5TCM9 118 aa4.72□□□□□ -1.65
CLIC1-207ENST00000375780 KRTAP23-1A1A580 65 aa4.71□□□□□ -1.66
CLIC1-207ENST00000375780 NEBP20929 6669 aa4.7□□□□□ -1.66
CLIC1-207ENST00000375780 PP632Q6XCG6 107 aa4.7□□□□□ -1.66
CLIC1-207ENST00000375780 MDN1Q9NU22 5596 aa4.69□□□□□ -1.66
CLIC1-207ENST00000375780 TNP1P09430 55 aa4.65□□□□□ -1.66
CLIC1-207ENST00000375780 KRTAP19-4Q3LI73 84 aa4.65□□□□□ -1.66
CLIC1-207ENST00000375780 SPRR2EP22531 72 aa4.63□□□□□ -1.67
CLIC1-207ENST00000375780 SPRR2BP35325 72 aa4.63□□□□□ -1.67
CLIC1-207ENST00000375780 SPRR2AP35326 72 aa4.63□□□□□ -1.67
CLIC1-207ENST00000375780 KRTAP15-1Q3LI76 137 aa4.61□□□□□ -1.67
CLIC1-207ENST00000375780 LCE1AQ5T7P2 110 aa4.58□□□□□ -1.68
CLIC1-207ENST00000375780 KRTAP20-1Q3LI63 56 aa4.56□□□□□ -1.68
CLIC1-207ENST00000375780 KRTAP2-3P0C7H8 128 aa4.48□□□□□ -1.69
CLIC1-207ENST00000375780 KRTAP2-4Q9BYR9 128 aa4.48□□□□□ -1.69
CLIC1-207ENST00000375780 SPRR2DP22532 72 aa4.47□□□□□ -1.69
CLIC1-207ENST00000375780 KRTAP19-7Q3SYF9 63 aa4.47□□□□□ -1.69
CLIC1-207ENST00000375780 LCE3AQ5TA76 89 aa4.46□□□□□ -1.7
CLIC1-207ENST00000375780 MT1EP04732 61 aa4.43□□□□□ -1.7
CLIC1-207ENST00000375780 KRTAP19-5Q3LI72 72 aa4.4□□□□□ -1.71
CLIC1-207ENST00000375780 KRTAP19-3Q7Z4W3 81 aa4.38□□□□□ -1.71
CLIC1-207ENST00000375780 KRTAP2-2Q9BYT5 123 aa4.36□□□□□ -1.71
CLIC1-207ENST00000375780 KRTAP2-1Q9BYU5 128 aa4.36□□□□□ -1.71
CLIC1-207ENST00000375780 NDUFAF8A1L188 74 aa4.35□□□□□ -1.71
CLIC1-207ENST00000375780 MT1GP13640 62 aa4.3□□□□□ -1.72
CLIC1-207ENST00000375780 SPRR5A0A1B0GTR4 108 aa4.29□□□□□ -1.72
CLIC1-207ENST00000375780 MT1LQ93083 61 aa4.27□□□□□ -1.73
CLIC1-207ENST00000375780 KRTAP12-3P60328 96 aa4.26□□□□□ -1.73
CLIC1-207ENST00000375780 LUZP6Q538Z0 58 aa4.25□□□□□ -1.73
CLIC1-207ENST00000375780 MT1MQ8N339 61 aa4.21□□□□□ -1.74
CLIC1-207ENST00000375780 DSTQ03001 7570 aaKnown RBP4.16□□□□□ -1.74
CLIC1-207ENST00000375780 KRTAP4-3Q9BYR4 195 aa4.06□□□□□ -1.76
CLIC1-207ENST00000375780 LCE3CQ5T5A8 94 aa3.97□□□□□ -1.77
CLIC1-207ENST00000375780 KRTAP5-4Q6L8H1 288 aa3.93□□□□□ -1.78
CLIC1-207ENST00000375780 MT4P47944 62 aa3.88□□□□□ -1.79
CLIC1-207ENST00000375780 KRTAP5-5Q701N2 237 aaPredicted RBP3.85□□□□□ -1.79
CLIC1-207ENST00000375780 HMCN1Q96RW7 5635 aa3.84□□□□□ -1.79
CLIC1-207ENST00000375780 KRTAP9-6A8MVA2 160 aa3.8□□□□□ -1.8
CLIC1-207ENST00000375780 KRTAP12-4P60329 112 aa3.73□□□□□ -1.81
CLIC1-207ENST00000375780 GPR98Q8WXG9 6306 aa3.69□□□□□ -1.82
CLIC1-207ENST00000375780 KRTAP20-2Q3LI61 65 aa3.69□□□□□ -1.82
CLIC1-207ENST00000375780 SYNE1Q8NF91 8797 aaKnown RBP3.66□□□□□ -1.82
CLIC1-207ENST00000375780 MT1AP04731 61 aa3.64□□□□□ -1.83
CLIC1-207ENST00000375780 AHNAK2Q8IVF2 5795 aa3.64□□□□□ -1.83
CLIC1-207ENST00000375780 INE1O15225 51 aa3.62□□□□□ -1.83
CLIC1-207ENST00000375780 KRTAP6-1Q3LI64 71 aa3.59□□□□□ -1.84
CLIC1-207ENST00000375780 KRTAP5-10Q6L8G5 202 aa3.55□□□□□ -1.84
CLIC1-207ENST00000375780 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.51□□□□□ -1.85
CLIC1-207ENST00000375780 KRTAP5-2Q701N4 177 aa3.46□□□□□ -1.85
CLIC1-207ENST00000375780 KRTAP6-2Q3LI66 62 aa3.4□□□□□ -1.87
CLIC1-207ENST00000375780 KRTAP5-7Q6L8G8 165 aa3.4□□□□□ -1.87
CLIC1-207ENST00000375780 MT3P25713 68 aa3.34□□□□□ -1.88
CLIC1-207ENST00000375780 KRTAP5-11Q6L8G4 156 aa3.33□□□□□ -1.88
CLIC1-207ENST00000375780 KRTAP5-8O75690 187 aa3.21□□□□□ -1.9
CLIC1-207ENST00000375780 OBSCNQ5VST9 7968 aa3.18□□□□□ -1.9
CLIC1-207ENST00000375780 KRTAP5-1Q6L8H4 278 aa3.07□□□□□ -1.92
CLIC1-207ENST00000375780 LCE1EQ5T753 118 aa3.05□□□□□ -1.92
CLIC1-207ENST00000375780 LCE3DQ9BYE3 92 aa3.02□□□□□ -1.93
CLIC1-207ENST00000375780 MUC5ACP98088 5654 aa3.01□□□□□ -1.93
CLIC1-207ENST00000375780 LCE3EQ5T5B0 92 aa2.98□□□□□ -1.93
CLIC1-207ENST00000375780 MUC5BQ9HC84 5762 aaPredicted RBP2.97□□□□□ -1.93
CLIC1-207ENST00000375780 AHNAKQ09666 5890 aaKnown RBP2.94□□□□□ -1.94
CLIC1-207ENST00000375780 KRTAP4-4Q9BYR3 166 aa2.93□□□□□ -1.94
CLIC1-207ENST00000375780 LCE1FQ5T754 118 aa2.85□□□□□ -1.95
CLIC1-207ENST00000375780 LCE1BQ5T7P3 118 aa2.81□□□□□ -1.96
CLIC1-207ENST00000375780 LCE1CQ5T751 118 aa2.8□□□□□ -1.96
CLIC1-207ENST00000375780 PRM1P04553 51 aa2.72□□□□□ -1.97
CLIC1-207ENST00000375780 KRTAP21-2Q3LI59 83 aa2.36□□□□□ -2.03
CLIC1-207ENST00000375780 PHGR1C9JFL3 82 aa2.17□□□□□ -2.06
CLIC1-207ENST00000375780 MUC19Q7Z5P9 8384 aa1.96□□□□□ -2.1
CLIC1-207ENST00000375780 KRTAP21-1Q3LI58 79 aa1.72□□□□□ -2.13
CLIC1-207ENST00000375780 MUC16Q8WXI7 14507 aa1.42□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 5.9 ms