RNA–Protein interactions for RNA: ENST00000375271.4

PTCH1-202, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-202ENST00000375271 SERP2Q8N6R1 65 aa5□□□□□ -1.61
PTCH1-202ENST00000375271 SERP1Q9Y6X1 66 aa4.98□□□□□ -1.61
PTCH1-202ENST00000375271 KRTAP5-4Q6L8H1 288 aa4.96□□□□□ -1.62
PTCH1-202ENST00000375271 MT1LQ93083 61 aa4.96□□□□□ -1.62
PTCH1-202ENST00000375271 SNURFQ9Y675 71 aa4.93□□□□□ -1.62
PTCH1-202ENST00000375271 KRTAP5-7Q6L8G8 165 aa4.92□□□□□ -1.62
PTCH1-202ENST00000375271 SPANXA2-OT1Q8N9U9 137 aa4.91□□□□□ -1.62
PTCH1-202ENST00000375271 ATP5EP56381 51 aaPredicted RBP4.9□□□□□ -1.63
PTCH1-202ENST00000375271 SPATA8Q6RVD6 105 aa4.9□□□□□ -1.63
PTCH1-202ENST00000375271 KRTAP4-3Q9BYR4 195 aa4.9□□□□□ -1.63
PTCH1-202ENST00000375271 SMIM26A0A096LP01 95 aa4.89□□□□□ -1.63
PTCH1-202ENST00000375271 V9GYY9 64 aa4.89□□□□□ -1.63
PTCH1-202ENST00000375271 KRTAP5-3Q6L8H2 238 aa4.88□□□□□ -1.63
PTCH1-202ENST00000375271 KRTAP4-11Q9BYQ6 195 aa4.88□□□□□ -1.63
PTCH1-202ENST00000375271 C10orf95Q9H7T3 257 aa4.86□□□□□ -1.63
PTCH1-202ENST00000375271 SPRR5A0A1B0GTR4 108 aa4.85□□□□□ -1.63
PTCH1-202ENST00000375271 A0A1B0GU33 70 aa4.84□□□□□ -1.63
PTCH1-202ENST00000375271 KRTAP12-1P59990 96 aa4.82□□□□□ -1.64
PTCH1-202ENST00000375271 KRTAP4-2Q9BYR5 136 aa4.82□□□□□ -1.64
PTCH1-202ENST00000375271 H7BZZ5 65 aa4.81□□□□□ -1.64
PTCH1-202ENST00000375271 TNP1P09430 55 aa4.81□□□□□ -1.64
PTCH1-202ENST00000375271 LCE3AQ5TA76 89 aa4.81□□□□□ -1.64
PTCH1-202ENST00000375271 COA5Q86WW8 74 aa4.81□□□□□ -1.64
PTCH1-202ENST00000375271 KRTAP20-2Q3LI61 65 aa4.76□□□□□ -1.65
PTCH1-202ENST00000375271 BRK1Q8WUW1 75 aa4.74□□□□□ -1.65
PTCH1-202ENST00000375271 KRTAP15-1Q3LI76 137 aa4.73□□□□□ -1.65
PTCH1-202ENST00000375271 KRTAP12-4P60329 112 aa4.72□□□□□ -1.65
PTCH1-202ENST00000375271 PMAIP1Q13794 54 aa4.7□□□□□ -1.66
PTCH1-202ENST00000375271 KRTAP12-3P60328 96 aa4.65□□□□□ -1.67
PTCH1-202ENST00000375271 Q1T7F1 81 aa4.65□□□□□ -1.67
PTCH1-202ENST00000375271 A0A1B0GU69 56 aa4.64□□□□□ -1.67
PTCH1-202ENST00000375271 A8MU10 97 aa4.62□□□□□ -1.67
PTCH1-202ENST00000375271 KRTAP5-5Q701N2 237 aaPredicted RBP4.59□□□□□ -1.67
PTCH1-202ENST00000375271 KTN1-AS1Q86SY8 53 aa4.56□□□□□ -1.68
PTCH1-202ENST00000375271 SYNE1Q8NF91 8797 aaKnown RBP4.56□□□□□ -1.68
PTCH1-202ENST00000375271 PRR15LQ9BU68 103 aa4.46□□□□□ -1.7
PTCH1-202ENST00000375271 PSPHP1O15172 72 aa4.44□□□□□ -1.7
PTCH1-202ENST00000375271 CDC42SE1Q9NRR8 79 aa4.4□□□□□ -1.71
PTCH1-202ENST00000375271 AHNAKQ09666 5890 aaKnown RBP4.39□□□□□ -1.71
PTCH1-202ENST00000375271 A6NED7 52 aa4.35□□□□□ -1.71
PTCH1-202ENST00000375271 KRTAP25-1Q3LHN0 102 aa4.33□□□□□ -1.72
PTCH1-202ENST00000375271 LINC01558Q9Y6Z2 57 aa4.33□□□□□ -1.72
PTCH1-202ENST00000375271 MUC5ACP98088 5654 aa4.31□□□□□ -1.72
PTCH1-202ENST00000375271 MUC5BQ9HC84 5762 aaPredicted RBP4.29□□□□□ -1.72
PTCH1-202ENST00000375271 KRTAP5-8O75690 187 aa4.28□□□□□ -1.72
PTCH1-202ENST00000375271 KRTAP5-2Q701N4 177 aa4.27□□□□□ -1.73
PTCH1-202ENST00000375271 MT1AP04731 61 aa4.24□□□□□ -1.73
PTCH1-202ENST00000375271 UQCR11O14957 56 aa4.23□□□□□ -1.73
PTCH1-202ENST00000375271 LCE3CQ5T5A8 94 aa4.22□□□□□ -1.73
PTCH1-202ENST00000375271 OBSCNQ5VST9 7968 aa4.22□□□□□ -1.73
PTCH1-202ENST00000375271 A0A0A0MQY5 61 aa4.21□□□□□ -1.74
PTCH1-202ENST00000375271 K7ERS5 55 aa4.21□□□□□ -1.74
PTCH1-202ENST00000375271 KRTAP6-1Q3LI64 71 aa4.21□□□□□ -1.74
PTCH1-202ENST00000375271 PRAC1Q96KF2 57 aa4.13□□□□□ -1.75
PTCH1-202ENST00000375271 KRTAP6-2Q3LI66 62 aa4.12□□□□□ -1.75
PTCH1-202ENST00000375271 MIR22HGQ0VDD5 57 aa4.09□□□□□ -1.75
PTCH1-202ENST00000375271 ROMO1P60602 79 aa3.95□□□□□ -1.78
PTCH1-202ENST00000375271 MT3P25713 68 aa3.94□□□□□ -1.78
PTCH1-202ENST00000375271 KRTAP5-1Q6L8H4 278 aa3.9□□□□□ -1.79
PTCH1-202ENST00000375271 KRTAP9-6A8MVA2 160 aa3.89□□□□□ -1.79
PTCH1-202ENST00000375271 LCE1EQ5T753 118 aa3.65□□□□□ -1.83
PTCH1-202ENST00000375271 NDUFAF8A1L188 74 aa3.63□□□□□ -1.83
PTCH1-202ENST00000375271 LCE1BQ5T7P3 118 aa3.55□□□□□ -1.84
PTCH1-202ENST00000375271 LUZP6Q538Z0 58 aa3.52□□□□□ -1.85
PTCH1-202ENST00000375271 LCE1CQ5T751 118 aa3.38□□□□□ -1.87
PTCH1-202ENST00000375271 LCE1FQ5T754 118 aa3.26□□□□□ -1.89
PTCH1-202ENST00000375271 KRTAP5-11Q6L8G4 156 aa3.25□□□□□ -1.89
PTCH1-202ENST00000375271 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.14□□□□□ -1.91
PTCH1-202ENST00000375271 INE1O15225 51 aa3.09□□□□□ -1.91
PTCH1-202ENST00000375271 PHGR1C9JFL3 82 aa3.04□□□□□ -1.92
PTCH1-202ENST00000375271 LCE3DQ9BYE3 92 aa3.01□□□□□ -1.93
PTCH1-202ENST00000375271 LCE3EQ5T5B0 92 aa2.8□□□□□ -1.96
PTCH1-202ENST00000375271 KRTAP21-2Q3LI59 83 aa2.74□□□□□ -1.97
PTCH1-202ENST00000375271 KRTAP4-4Q9BYR3 166 aa2.63□□□□□ -1.99
PTCH1-202ENST00000375271 MUC19Q7Z5P9 8384 aa2.62□□□□□ -1.99
PTCH1-202ENST00000375271 KRTAP21-1Q3LI58 79 aa2.32□□□□□ -2.04
PTCH1-202ENST00000375271 PRM1P04553 51 aa1.95□□□□□ -2.1
PTCH1-202ENST00000375271 MUC16Q8WXI7 14507 aa1.8□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 195.9 ms