RNA–Protein interactions for RNA: ENST00000375167.1

H2AFX-201, Transcript of H2A histone family member X, humanhuman

TSL 2

Gene H2AFX, Length 1,373 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFX-201ENST00000375167 BRK1Q8WUW1 75 aa6.75□□□□□ -1.33
H2AFX-201ENST00000375167 CDC42SE1Q9NRR8 79 aa6.73□□□□□ -1.33
H2AFX-201ENST00000375167 A0A0D9SG42 100 aa6.72□□□□□ -1.33
H2AFX-201ENST00000375167 PRO0628Q9UI54 55 aa6.7□□□□□ -1.34
H2AFX-201ENST00000375167 CAMK2N1Q7Z7J9 78 aa6.69□□□□□ -1.34
H2AFX-201ENST00000375167 A8MU10 97 aa6.67□□□□□ -1.34
H2AFX-201ENST00000375167 KRTAP19-3Q7Z4W3 81 aa6.67□□□□□ -1.34
H2AFX-201ENST00000375167 MIR22HGQ0VDD5 57 aa6.65□□□□□ -1.35
H2AFX-201ENST00000375167 SPINT4Q6UDR6 99 aa6.65□□□□□ -1.35
H2AFX-201ENST00000375167 KRTAP4-6Q9BYQ5 205 aa6.63□□□□□ -1.35
H2AFX-201ENST00000375167 K7ERS5 55 aa6.57□□□□□ -1.36
H2AFX-201ENST00000375167 KRTAP12-1P59990 96 aa6.57□□□□□ -1.36
H2AFX-201ENST00000375167 KRTAP5-4Q6L8H1 288 aa6.55□□□□□ -1.36
H2AFX-201ENST00000375167 MT1EP04732 61 aa6.5□□□□□ -1.37
H2AFX-201ENST00000375167 KRTAP19-7Q3SYF9 63 aa6.48□□□□□ -1.37
H2AFX-201ENST00000375167 PP632Q6XCG6 107 aa6.4□□□□□ -1.39
H2AFX-201ENST00000375167 PMAIP1Q13794 54 aa6.39□□□□□ -1.39
H2AFX-201ENST00000375167 MT1GP13640 62 aa6.38□□□□□ -1.39
H2AFX-201ENST00000375167 AHNAKQ09666 5890 aaKnown RBP6.38□□□□□ -1.39
H2AFX-201ENST00000375167 SVIPQ8NHG7 77 aa6.37□□□□□ -1.39
H2AFX-201ENST00000375167 TNP1P09430 55 aa6.28□□□□□ -1.4
H2AFX-201ENST00000375167 KRTAP20-2Q3LI61 65 aa6.27□□□□□ -1.41
H2AFX-201ENST00000375167 MT1MQ8N339 61 aa6.27□□□□□ -1.41
H2AFX-201ENST00000375167 MUC5ACP98088 5654 aa6.21□□□□□ -1.42
H2AFX-201ENST00000375167 KTN1-AS1Q86SY8 53 aa6.19□□□□□ -1.42
H2AFX-201ENST00000375167 C10orf95Q9H7T3 257 aa6.19□□□□□ -1.42
H2AFX-201ENST00000375167 KRTAP25-1Q3LHN0 102 aa6.14□□□□□ -1.43
H2AFX-201ENST00000375167 KRTAP4-3Q9BYR4 195 aa6.14□□□□□ -1.43
H2AFX-201ENST00000375167 ROMO1P60602 79 aa6.09□□□□□ -1.43
H2AFX-201ENST00000375167 KRTAP19-5Q3LI72 72 aa6.07□□□□□ -1.44
H2AFX-201ENST00000375167 MUC5BQ9HC84 5762 aaPredicted RBP6.06□□□□□ -1.44
H2AFX-201ENST00000375167 MT1LQ93083 61 aa6.04□□□□□ -1.44
H2AFX-201ENST00000375167 KRTAP12-4P60329 112 aa5.98□□□□□ -1.45
H2AFX-201ENST00000375167 LCE3AQ5TA76 89 aa5.97□□□□□ -1.45
H2AFX-201ENST00000375167 PRAC1Q96KF2 57 aa5.97□□□□□ -1.45
H2AFX-201ENST00000375167 KRTAP4-11Q9BYQ6 195 aa5.97□□□□□ -1.45
H2AFX-201ENST00000375167 KRTAP23-1A1A580 65 aa5.95□□□□□ -1.46
H2AFX-201ENST00000375167 LOC100996750A0A140TA64 210 aa5.92□□□□□ -1.46
H2AFX-201ENST00000375167 KRTAP4-7Q9BYR0 210 aa5.91□□□□□ -1.46
H2AFX-201ENST00000375167 KRTAP5-8O75690 187 aa5.86□□□□□ -1.47
H2AFX-201ENST00000375167 KRTAP5-5Q701N2 237 aaPredicted RBP5.81□□□□□ -1.48
H2AFX-201ENST00000375167 KRTAP12-3P60328 96 aa5.8□□□□□ -1.48
H2AFX-201ENST00000375167 SYNE1Q8NF91 8797 aaKnown RBP5.74□□□□□ -1.49
H2AFX-201ENST00000375167 KRTAP9-9Q9BYP9 154 aa5.71□□□□□ -1.5
H2AFX-201ENST00000375167 KRTAP19-4Q3LI73 84 aa5.66□□□□□ -1.5
H2AFX-201ENST00000375167 KRTAP15-1Q3LI76 137 aa5.56□□□□□ -1.52
H2AFX-201ENST00000375167 KRTAP5-2Q701N4 177 aa5.55□□□□□ -1.52
H2AFX-201ENST00000375167 OBSCNQ5VST9 7968 aa5.48□□□□□ -1.53
H2AFX-201ENST00000375167 LCE3CQ5T5A8 94 aa5.36□□□□□ -1.55
H2AFX-201ENST00000375167 KRTAP9-4Q9BYQ2 154 aa5.18□□□□□ -1.58
H2AFX-201ENST00000375167 KRTAP5-1Q6L8H4 278 aa5.16□□□□□ -1.58
H2AFX-201ENST00000375167 KRTAP6-1Q3LI64 71 aa5.15□□□□□ -1.59
H2AFX-201ENST00000375167 KRTAP6-2Q3LI66 62 aa5.14□□□□□ -1.59
H2AFX-201ENST00000375167 MT1AP04731 61 aa5.13□□□□□ -1.59
H2AFX-201ENST00000375167 KRTAP9-6A8MVA2 160 aa5.01□□□□□ -1.61
H2AFX-201ENST00000375167 KRTAP4-12Q9BQ66 201 aa5.01□□□□□ -1.61
H2AFX-201ENST00000375167 LUZP6Q538Z0 58 aa4.83□□□□□ -1.64
H2AFX-201ENST00000375167 NDUFAF8A1L188 74 aa4.78□□□□□ -1.64
H2AFX-201ENST00000375167 MT3P25713 68 aa4.75□□□□□ -1.65
H2AFX-201ENST00000375167 LCE1EQ5T753 118 aa4.59□□□□□ -1.67
H2AFX-201ENST00000375167 KRTAP4-2Q9BYR5 136 aa4.58□□□□□ -1.68
H2AFX-201ENST00000375167 H3BS24 57 aa4.45□□□□□ -1.7
H2AFX-201ENST00000375167 LCE1BQ5T7P3 118 aa4.43□□□□□ -1.7
H2AFX-201ENST00000375167 PHGR1C9JFL3 82 aa4.26□□□□□ -1.73
H2AFX-201ENST00000375167 LCE1CQ5T751 118 aa4.26□□□□□ -1.73
H2AFX-201ENST00000375167 A0A0A0MQY5 61 aa4.22□□□□□ -1.73
H2AFX-201ENST00000375167 KRTAP5-11Q6L8G4 156 aa4.19□□□□□ -1.74
H2AFX-201ENST00000375167 LCE1FQ5T754 118 aa4.1□□□□□ -1.75
H2AFX-201ENST00000375167 INE1O15225 51 aa4□□□□□ -1.77
H2AFX-201ENST00000375167 LCE3DQ9BYE3 92 aa3.99□□□□□ -1.77
H2AFX-201ENST00000375167 LCE3EQ5T5B0 92 aa3.83□□□□□ -1.8
H2AFX-201ENST00000375167 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.74□□□□□ -1.81
H2AFX-201ENST00000375167 MUC19Q7Z5P9 8384 aa3.46□□□□□ -1.85
H2AFX-201ENST00000375167 KRTAP21-2Q3LI59 83 aa3.38□□□□□ -1.87
H2AFX-201ENST00000375167 KRTAP4-4Q9BYR3 166 aa3.28□□□□□ -1.88
H2AFX-201ENST00000375167 KRTAP21-1Q3LI58 79 aa3.25□□□□□ -1.89
H2AFX-201ENST00000375167 PRM1P04553 51 aa3.16□□□□□ -1.9
H2AFX-201ENST00000375167 MUC16Q8WXI7 14507 aa2.37□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 7.6 ms