RNA–Protein interactions for RNA: ENST00000373163.5

TRAPPC3-203, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 951 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-203ENST00000373163 MT1EP04732 61 aa5.87□□□□□ -1.47
TRAPPC3-203ENST00000373163 A8MU10 97 aa5.84□□□□□ -1.47
TRAPPC3-203ENST00000373163 A0A1B0GU69 56 aa5.81□□□□□ -1.48
TRAPPC3-203ENST00000373163 KRTAP5-3Q6L8H2 238 aa5.79□□□□□ -1.48
TRAPPC3-203ENST00000373163 KRTAP4-6Q9BYQ5 205 aa5.79□□□□□ -1.48
TRAPPC3-203ENST00000373163 SPATA8Q6RVD6 105 aa5.78□□□□□ -1.48
TRAPPC3-203ENST00000373163 SPRR5A0A1B0GTR4 108 aa5.76□□□□□ -1.49
TRAPPC3-203ENST00000373163 UQCR11O14957 56 aa5.76□□□□□ -1.49
TRAPPC3-203ENST00000373163 KRTAP5-4Q6L8H1 288 aa5.75□□□□□ -1.49
TRAPPC3-203ENST00000373163 MT1GP13640 62 aa5.73□□□□□ -1.49
TRAPPC3-203ENST00000373163 MIR22HGQ0VDD5 57 aa5.72□□□□□ -1.49
TRAPPC3-203ENST00000373163 PP632Q6XCG6 107 aa5.7□□□□□ -1.5
TRAPPC3-203ENST00000373163 MT1MQ8N339 61 aa5.63□□□□□ -1.51
TRAPPC3-203ENST00000373163 KRTAP19-5Q3LI72 72 aa5.56□□□□□ -1.52
TRAPPC3-203ENST00000373163 KRTAP4-3Q9BYR4 195 aa5.54□□□□□ -1.52
TRAPPC3-203ENST00000373163 CAMK2N1Q7Z7J9 78 aa5.53□□□□□ -1.52
TRAPPC3-203ENST00000373163 PRAC1Q96KF2 57 aa5.53□□□□□ -1.52
TRAPPC3-203ENST00000373163 KRTAP20-2Q3LI61 65 aa5.49□□□□□ -1.53
TRAPPC3-203ENST00000373163 MT1LQ93083 61 aa5.49□□□□□ -1.53
TRAPPC3-203ENST00000373163 K7ERS5 55 aa5.47□□□□□ -1.53
TRAPPC3-203ENST00000373163 A0A0D9SG42 100 aa5.45□□□□□ -1.54
TRAPPC3-203ENST00000373163 A0A1B0GU33 70 aa5.43□□□□□ -1.54
TRAPPC3-203ENST00000373163 KRTAP25-1Q3LHN0 102 aa5.38□□□□□ -1.55
TRAPPC3-203ENST00000373163 KRTAP13-4Q3LI77 160 aa5.31□□□□□ -1.56
TRAPPC3-203ENST00000373163 KRTAP12-4P60329 112 aa5.27□□□□□ -1.57
TRAPPC3-203ENST00000373163 ROMO1P60602 79 aa5.25□□□□□ -1.57
TRAPPC3-203ENST00000373163 KRTAP5-5Q701N2 237 aaPredicted RBP5.23□□□□□ -1.57
TRAPPC3-203ENST00000373163 KRTAP4-7Q9BYR0 210 aa5.21□□□□□ -1.58
TRAPPC3-203ENST00000373163 H3BS24 57 aa5.19□□□□□ -1.58
TRAPPC3-203ENST00000373163 C10orf95Q9H7T3 257 aa5.19□□□□□ -1.58
TRAPPC3-203ENST00000373163 KRTAP4-11Q9BYQ6 195 aa5.18□□□□□ -1.58
TRAPPC3-203ENST00000373163 AHNAKQ09666 5890 aaKnown RBP5.15□□□□□ -1.58
TRAPPC3-203ENST00000373163 LOC100996750A0A140TA64 210 aa5.15□□□□□ -1.59
TRAPPC3-203ENST00000373163 MUC5ACP98088 5654 aa5.14□□□□□ -1.59
TRAPPC3-203ENST00000373163 LCE3AQ5TA76 89 aa5.11□□□□□ -1.59
TRAPPC3-203ENST00000373163 SPINT4Q6UDR6 99 aa5.06□□□□□ -1.6
TRAPPC3-203ENST00000373163 SYNE1Q8NF91 8797 aaKnown RBP5.06□□□□□ -1.6
TRAPPC3-203ENST00000373163 KRTAP5-8O75690 187 aa5.05□□□□□ -1.6
TRAPPC3-203ENST00000373163 MUC5BQ9HC84 5762 aaPredicted RBP5.02□□□□□ -1.61
TRAPPC3-203ENST00000373163 KRTAP12-1P59990 96 aa4.94□□□□□ -1.62
TRAPPC3-203ENST00000373163 KRTAP5-2Q701N4 177 aa4.93□□□□□ -1.62
TRAPPC3-203ENST00000373163 TNP1P09430 55 aa4.9□□□□□ -1.63
TRAPPC3-203ENST00000373163 KRTAP12-3P60328 96 aa4.9□□□□□ -1.63
TRAPPC3-203ENST00000373163 KRTAP15-1Q3LI76 137 aa4.89□□□□□ -1.63
TRAPPC3-203ENST00000373163 KRTAP9-9Q9BYP9 154 aa4.88□□□□□ -1.63
TRAPPC3-203ENST00000373163 NDUFAF8A1L188 74 aa4.76□□□□□ -1.65
TRAPPC3-203ENST00000373163 OBSCNQ5VST9 7968 aa4.68□□□□□ -1.66
TRAPPC3-203ENST00000373163 KRTAP6-1Q3LI64 71 aa4.68□□□□□ -1.66
TRAPPC3-203ENST00000373163 MT1AP04731 61 aa4.66□□□□□ -1.66
TRAPPC3-203ENST00000373163 KRTAP6-2Q3LI66 62 aa4.61□□□□□ -1.67
TRAPPC3-203ENST00000373163 KRTAP23-1A1A580 65 aa4.6□□□□□ -1.67
TRAPPC3-203ENST00000373163 LUZP6Q538Z0 58 aa4.58□□□□□ -1.68
TRAPPC3-203ENST00000373163 KRTAP9-4Q9BYQ2 154 aa4.58□□□□□ -1.68
TRAPPC3-203ENST00000373163 KRTAP4-12Q9BQ66 201 aa4.56□□□□□ -1.68
TRAPPC3-203ENST00000373163 KRTAP19-4Q3LI73 84 aa4.55□□□□□ -1.68
TRAPPC3-203ENST00000373163 KRTAP5-1Q6L8H4 278 aa4.54□□□□□ -1.68
TRAPPC3-203ENST00000373163 A0A0A0MQY5 61 aa4.48□□□□□ -1.69
TRAPPC3-203ENST00000373163 LCE3CQ5T5A8 94 aa4.44□□□□□ -1.7
TRAPPC3-203ENST00000373163 MT3P25713 68 aa4.3□□□□□ -1.72
TRAPPC3-203ENST00000373163 KRTAP9-6A8MVA2 160 aa4.21□□□□□ -1.74
TRAPPC3-203ENST00000373163 INE1O15225 51 aa4.1□□□□□ -1.75
TRAPPC3-203ENST00000373163 LCE1EQ5T753 118 aa4.1□□□□□ -1.75
TRAPPC3-203ENST00000373163 KRTAP4-2Q9BYR5 136 aa4.01□□□□□ -1.77
TRAPPC3-203ENST00000373163 LCE1BQ5T7P3 118 aa3.94□□□□□ -1.78
TRAPPC3-203ENST00000373163 LCE1CQ5T751 118 aa3.81□□□□□ -1.8
TRAPPC3-203ENST00000373163 KRTAP5-11Q6L8G4 156 aa3.64□□□□□ -1.83
TRAPPC3-203ENST00000373163 PHGR1C9JFL3 82 aa3.59□□□□□ -1.83
TRAPPC3-203ENST00000373163 LCE1FQ5T754 118 aa3.57□□□□□ -1.84
TRAPPC3-203ENST00000373163 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.37□□□□□ -1.87
TRAPPC3-203ENST00000373163 KRTAP21-2Q3LI59 83 aa3.09□□□□□ -1.91
TRAPPC3-203ENST00000373163 LCE3DQ9BYE3 92 aa3.06□□□□□ -1.92
TRAPPC3-203ENST00000373163 KRTAP4-4Q9BYR3 166 aa2.95□□□□□ -1.94
TRAPPC3-203ENST00000373163 MUC19Q7Z5P9 8384 aa2.92□□□□□ -1.94
TRAPPC3-203ENST00000373163 LCE3EQ5T5B0 92 aa2.89□□□□□ -1.95
TRAPPC3-203ENST00000373163 KRTAP21-1Q3LI58 79 aa2.73□□□□□ -1.97
TRAPPC3-203ENST00000373163 PRM1P04553 51 aa2.72□□□□□ -1.97
TRAPPC3-203ENST00000373163 MUC16Q8WXI7 14507 aa2.09□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 57 ms