RNA–Protein interactions for RNA: ENST00000373162.5

TRAPPC3-202, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-202ENST00000373162 MT1GP13640 62 aa6.49□□□□□ -1.37
TRAPPC3-202ENST00000373162 K7ERS5 55 aa6.46□□□□□ -1.38
TRAPPC3-202ENST00000373162 MT1LQ93083 61 aa6.43□□□□□ -1.38
TRAPPC3-202ENST00000373162 C10orf95Q9H7T3 257 aa6.42□□□□□ -1.38
TRAPPC3-202ENST00000373162 MT1MQ8N339 61 aa6.41□□□□□ -1.38
TRAPPC3-202ENST00000373162 CDC42SE1Q9NRR8 79 aa6.39□□□□□ -1.39
TRAPPC3-202ENST00000373162 LCE3AQ5TA76 89 aa6.38□□□□□ -1.39
TRAPPC3-202ENST00000373162 LCE1DQ5T752 114 aa6.36□□□□□ -1.39
TRAPPC3-202ENST00000373162 PP632Q6XCG6 107 aa6.36□□□□□ -1.39
TRAPPC3-202ENST00000373162 HMCN1Q96RW7 5635 aa6.32□□□□□ -1.4
TRAPPC3-202ENST00000373162 TNP1P09430 55 aa6.31□□□□□ -1.4
TRAPPC3-202ENST00000373162 AHNAK2Q8IVF2 5795 aa6.26□□□□□ -1.41
TRAPPC3-202ENST00000373162 LCE4AQ5TA78 99 aa6.25□□□□□ -1.41
TRAPPC3-202ENST00000373162 KRTAP4-3Q9BYR4 195 aa6.25□□□□□ -1.41
TRAPPC3-202ENST00000373162 KRTAP5-4Q6L8H1 288 aa6.22□□□□□ -1.41
TRAPPC3-202ENST00000373162 MT4P47944 62 aa6.19□□□□□ -1.42
TRAPPC3-202ENST00000373162 KRTAP25-1Q3LHN0 102 aa6.16□□□□□ -1.42
TRAPPC3-202ENST00000373162 KRTAP5-10Q6L8G5 202 aa6.15□□□□□ -1.42
TRAPPC3-202ENST00000373162 BRK1Q8WUW1 75 aa6.14□□□□□ -1.43
TRAPPC3-202ENST00000373162 KRTAP12-3P60328 96 aa6.11□□□□□ -1.43
TRAPPC3-202ENST00000373162 ROMO1P60602 79 aa6.1□□□□□ -1.43
TRAPPC3-202ENST00000373162 KRTAP4-7Q9BYR0 210 aa6.1□□□□□ -1.43
TRAPPC3-202ENST00000373162 KRTAP4-6Q9BYQ5 205 aa6.04□□□□□ -1.44
TRAPPC3-202ENST00000373162 KRTAP5-5Q701N2 237 aaPredicted RBP5.96□□□□□ -1.46
TRAPPC3-202ENST00000373162 KRTAP23-1A1A580 65 aa5.95□□□□□ -1.46
TRAPPC3-202ENST00000373162 KRTAP5-7Q6L8G8 165 aa5.94□□□□□ -1.46
TRAPPC3-202ENST00000373162 KRTAP5-3Q6L8H2 238 aa5.88□□□□□ -1.47
TRAPPC3-202ENST00000373162 KRTAP20-2Q3LI61 65 aa5.82□□□□□ -1.48
TRAPPC3-202ENST00000373162 PMAIP1Q13794 54 aa5.79□□□□□ -1.48
TRAPPC3-202ENST00000373162 KRTAP19-4Q3LI73 84 aa5.79□□□□□ -1.48
TRAPPC3-202ENST00000373162 SPRR5A0A1B0GTR4 108 aa5.78□□□□□ -1.48
TRAPPC3-202ENST00000373162 LOC100996750A0A140TA64 210 aa5.76□□□□□ -1.49
TRAPPC3-202ENST00000373162 PRO0628Q9UI54 55 aa5.74□□□□□ -1.49
TRAPPC3-202ENST00000373162 KRTAP15-1Q3LI76 137 aa5.69□□□□□ -1.5
TRAPPC3-202ENST00000373162 KRTAP12-4P60329 112 aa5.65□□□□□ -1.5
TRAPPC3-202ENST00000373162 SYNE1Q8NF91 8797 aaKnown RBP5.64□□□□□ -1.51
TRAPPC3-202ENST00000373162 LCE3CQ5T5A8 94 aa5.63□□□□□ -1.51
TRAPPC3-202ENST00000373162 PRAC1Q96KF2 57 aa5.48□□□□□ -1.53
TRAPPC3-202ENST00000373162 MT1AP04731 61 aa5.46□□□□□ -1.54
TRAPPC3-202ENST00000373162 KRTAP5-2Q701N4 177 aa5.46□□□□□ -1.54
TRAPPC3-202ENST00000373162 KRTAP6-1Q3LI64 71 aa5.44□□□□□ -1.54
TRAPPC3-202ENST00000373162 KRTAP9-6A8MVA2 160 aa5.41□□□□□ -1.54
TRAPPC3-202ENST00000373162 KTN1-AS1Q86SY8 53 aa5.4□□□□□ -1.54
TRAPPC3-202ENST00000373162 KRTAP4-11Q9BYQ6 195 aa5.35□□□□□ -1.55
TRAPPC3-202ENST00000373162 KRTAP9-4Q9BYQ2 154 aa5.27□□□□□ -1.57
TRAPPC3-202ENST00000373162 MUC5ACP98088 5654 aa5.23□□□□□ -1.57
TRAPPC3-202ENST00000373162 AHNAKQ09666 5890 aaKnown RBP5.23□□□□□ -1.57
TRAPPC3-202ENST00000373162 KRTAP5-8O75690 187 aa5.21□□□□□ -1.58
TRAPPC3-202ENST00000373162 MUC5BQ9HC84 5762 aaPredicted RBP5.2□□□□□ -1.58
TRAPPC3-202ENST00000373162 SVIPQ8NHG7 77 aa5.19□□□□□ -1.58
TRAPPC3-202ENST00000373162 KRTAP6-2Q3LI66 62 aa5.17□□□□□ -1.58
TRAPPC3-202ENST00000373162 OBSCNQ5VST9 7968 aa5.07□□□□□ -1.6
TRAPPC3-202ENST00000373162 MT3P25713 68 aa4.94□□□□□ -1.62
TRAPPC3-202ENST00000373162 KRTAP9-9Q9BYP9 154 aa4.91□□□□□ -1.62
TRAPPC3-202ENST00000373162 KRTAP5-1Q6L8H4 278 aa4.88□□□□□ -1.63
TRAPPC3-202ENST00000373162 KRTAP4-12Q9BQ66 201 aa4.81□□□□□ -1.64
TRAPPC3-202ENST00000373162 H3BS24 57 aa4.72□□□□□ -1.65
TRAPPC3-202ENST00000373162 LCE1EQ5T753 118 aa4.62□□□□□ -1.67
TRAPPC3-202ENST00000373162 LUZP6Q538Z0 58 aa4.58□□□□□ -1.68
TRAPPC3-202ENST00000373162 KRTAP4-2Q9BYR5 136 aa4.42□□□□□ -1.7
TRAPPC3-202ENST00000373162 LCE1CQ5T751 118 aa4.29□□□□□ -1.72
TRAPPC3-202ENST00000373162 LCE1BQ5T7P3 118 aa4.29□□□□□ -1.72
TRAPPC3-202ENST00000373162 NDUFAF8A1L188 74 aa4.08□□□□□ -1.76
TRAPPC3-202ENST00000373162 LCE3DQ9BYE3 92 aa4.03□□□□□ -1.76
TRAPPC3-202ENST00000373162 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.95□□□□□ -1.78
TRAPPC3-202ENST00000373162 KRTAP5-11Q6L8G4 156 aa3.92□□□□□ -1.78
TRAPPC3-202ENST00000373162 LCE3EQ5T5B0 92 aa3.87□□□□□ -1.79
TRAPPC3-202ENST00000373162 LCE1FQ5T754 118 aa3.78□□□□□ -1.8
TRAPPC3-202ENST00000373162 KRTAP21-2Q3LI59 83 aa3.62□□□□□ -1.83
TRAPPC3-202ENST00000373162 PHGR1C9JFL3 82 aa3.53□□□□□ -1.84
TRAPPC3-202ENST00000373162 A0A0A0MQY5 61 aa3.48□□□□□ -1.85
TRAPPC3-202ENST00000373162 INE1O15225 51 aa3.36□□□□□ -1.87
TRAPPC3-202ENST00000373162 KRTAP4-4Q9BYR3 166 aa3.24□□□□□ -1.89
TRAPPC3-202ENST00000373162 PRM1P04553 51 aa3.15□□□□□ -1.91
TRAPPC3-202ENST00000373162 MUC19Q7Z5P9 8384 aa3.15□□□□□ -1.91
TRAPPC3-202ENST00000373162 KRTAP21-1Q3LI58 79 aa2.68□□□□□ -1.98
TRAPPC3-202ENST00000373162 MUC16Q8WXI7 14507 aa2.24□□□□□ -2.05
Retrieved 77 of 20,778 RNA–protein pairs in 113.5 ms