RNA–Protein interactions for RNA: ENST00000372317.7

CALCOCO2-202, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 462 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-202ENST00000372317 KRTAP8-1Q8IUC2 63 aa4.41□□□□□ -1.7
CALCOCO2-202ENST00000372317 KMT2DO14686 5537 aa4.38□□□□□ -1.71
CALCOCO2-202ENST00000372317 SYNE2Q8WXH0 6885 aaKnown RBP4.38□□□□□ -1.71
CALCOCO2-202ENST00000372317 KRTAP5-3Q6L8H2 238 aa4.33□□□□□ -1.72
CALCOCO2-202ENST00000372317 PRAC1Q96KF2 57 aa4.32□□□□□ -1.72
CALCOCO2-202ENST00000372317 KRTAP6-3Q3LI67 103 aa4.31□□□□□ -1.72
CALCOCO2-202ENST00000372317 KRTAP19-5Q3LI72 72 aa4.31□□□□□ -1.72
CALCOCO2-202ENST00000372317 KRTAP5-9P26371 169 aa4.3□□□□□ -1.72
CALCOCO2-202ENST00000372317 KRTAP19-7Q3SYF9 63 aa4.3□□□□□ -1.72
CALCOCO2-202ENST00000372317 PP632Q6XCG6 107 aa4.3□□□□□ -1.72
CALCOCO2-202ENST00000372317 KTN1-AS1Q86SY8 53 aa4.3□□□□□ -1.72
CALCOCO2-202ENST00000372317 SPRR2FQ96RM1 72 aa4.3□□□□□ -1.72
CALCOCO2-202ENST00000372317 KRTAP12-3P60328 96 aa4.25□□□□□ -1.73
CALCOCO2-202ENST00000372317 MT1EP04732 61 aa4.24□□□□□ -1.73
CALCOCO2-202ENST00000372317 SPRR2EP22531 72 aa4.14□□□□□ -1.75
CALCOCO2-202ENST00000372317 SPRR2BP35325 72 aa4.14□□□□□ -1.75
CALCOCO2-202ENST00000372317 SPRR2AP35326 72 aa4.14□□□□□ -1.75
CALCOCO2-202ENST00000372317 LCE1AQ5T7P2 110 aa4.13□□□□□ -1.75
CALCOCO2-202ENST00000372317 MUC12Q9UKN1 5478 aa4.13□□□□□ -1.75
CALCOCO2-202ENST00000372317 MT1LQ93083 61 aa4.12□□□□□ -1.75
CALCOCO2-202ENST00000372317 NEBP20929 6669 aa4.11□□□□□ -1.75
CALCOCO2-202ENST00000372317 KRTAP19-3Q7Z4W3 81 aa4.11□□□□□ -1.75
CALCOCO2-202ENST00000372317 SVIPQ8NHG7 77 aa4.1□□□□□ -1.75
CALCOCO2-202ENST00000372317 MDN1Q9NU22 5596 aa4.05□□□□□ -1.76
CALCOCO2-202ENST00000372317 MT1GP13640 62 aa4.03□□□□□ -1.76
CALCOCO2-202ENST00000372317 MT1MQ8N339 61 aa4.01□□□□□ -1.77
CALCOCO2-202ENST00000372317 SPRR2DP22532 72 aa3.99□□□□□ -1.77
CALCOCO2-202ENST00000372317 LCE3CQ5T5A8 94 aa3.94□□□□□ -1.78
CALCOCO2-202ENST00000372317 KRTAP4-3Q9BYR4 195 aa3.92□□□□□ -1.78
CALCOCO2-202ENST00000372317 KRTAP20-1Q3LI63 56 aa3.81□□□□□ -1.8
CALCOCO2-202ENST00000372317 KRTAP2-3P0C7H8 128 aa3.79□□□□□ -1.8
CALCOCO2-202ENST00000372317 KRTAP2-4Q9BYR9 128 aa3.79□□□□□ -1.8
CALCOCO2-202ENST00000372317 SPRR5A0A1B0GTR4 108 aa3.75□□□□□ -1.81
CALCOCO2-202ENST00000372317 KRTAP9-6A8MVA2 160 aa3.74□□□□□ -1.81
CALCOCO2-202ENST00000372317 KRTAP2-2Q9BYT5 123 aa3.7□□□□□ -1.82
CALCOCO2-202ENST00000372317 DSTQ03001 7570 aaKnown RBP3.7□□□□□ -1.82
CALCOCO2-202ENST00000372317 A0A0A0MQY5 61 aa3.69□□□□□ -1.82
CALCOCO2-202ENST00000372317 KRTAP2-1Q9BYU5 128 aa3.69□□□□□ -1.82
CALCOCO2-202ENST00000372317 KRTAP5-5Q701N2 237 aaPredicted RBP3.63□□□□□ -1.83
CALCOCO2-202ENST00000372317 KRTAP5-4Q6L8H1 288 aa3.55□□□□□ -1.84
CALCOCO2-202ENST00000372317 MT3P25713 68 aa3.54□□□□□ -1.84
CALCOCO2-202ENST00000372317 MT1AP04731 61 aa3.51□□□□□ -1.85
CALCOCO2-202ENST00000372317 LUZP6Q538Z0 58 aa3.5□□□□□ -1.85
CALCOCO2-202ENST00000372317 KRTAP6-1Q3LI64 71 aa3.48□□□□□ -1.85
CALCOCO2-202ENST00000372317 MT4P47944 62 aa3.46□□□□□ -1.86
CALCOCO2-202ENST00000372317 KRTAP12-4P60329 112 aa3.4□□□□□ -1.87
CALCOCO2-202ENST00000372317 KRTAP5-11Q6L8G4 156 aa3.4□□□□□ -1.87
CALCOCO2-202ENST00000372317 SYNE1Q8NF91 8797 aaKnown RBP3.39□□□□□ -1.87
CALCOCO2-202ENST00000372317 LCE1EQ5T753 118 aa3.37□□□□□ -1.87
CALCOCO2-202ENST00000372317 KRTAP20-2Q3LI61 65 aa3.34□□□□□ -1.87
CALCOCO2-202ENST00000372317 HMCN1Q96RW7 5635 aa3.34□□□□□ -1.87
CALCOCO2-202ENST00000372317 NDUFAF8A1L188 74 aa3.3□□□□□ -1.88
CALCOCO2-202ENST00000372317 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.3□□□□□ -1.88
CALCOCO2-202ENST00000372317 KRTAP6-2Q3LI66 62 aa3.23□□□□□ -1.89
CALCOCO2-202ENST00000372317 LCE1FQ5T754 118 aa3.21□□□□□ -1.9
CALCOCO2-202ENST00000372317 GPR98Q8WXG9 6306 aa3.2□□□□□ -1.9
CALCOCO2-202ENST00000372317 KRTAP5-2Q701N4 177 aa3.2□□□□□ -1.9
CALCOCO2-202ENST00000372317 AHNAK2Q8IVF2 5795 aa3.08□□□□□ -1.92
CALCOCO2-202ENST00000372317 KRTAP5-10Q6L8G5 202 aa2.96□□□□□ -1.94
CALCOCO2-202ENST00000372317 LCE3DQ9BYE3 92 aa2.92□□□□□ -1.94
CALCOCO2-202ENST00000372317 OBSCNQ5VST9 7968 aa2.9□□□□□ -1.95
CALCOCO2-202ENST00000372317 KRTAP5-1Q6L8H4 278 aa2.89□□□□□ -1.95
CALCOCO2-202ENST00000372317 KRTAP5-8O75690 187 aa2.82□□□□□ -1.96
CALCOCO2-202ENST00000372317 LCE3EQ5T5B0 92 aa2.82□□□□□ -1.96
CALCOCO2-202ENST00000372317 KRTAP5-7Q6L8G8 165 aa2.77□□□□□ -1.97
CALCOCO2-202ENST00000372317 KRTAP4-4Q9BYR3 166 aa2.76□□□□□ -1.97
CALCOCO2-202ENST00000372317 INE1O15225 51 aa2.69□□□□□ -1.98
CALCOCO2-202ENST00000372317 MUC5ACP98088 5654 aa2.68□□□□□ -1.98
CALCOCO2-202ENST00000372317 LCE1BQ5T7P3 118 aa2.64□□□□□ -1.99
CALCOCO2-202ENST00000372317 LCE1CQ5T751 118 aa2.59□□□□□ -1.99
CALCOCO2-202ENST00000372317 MUC5BQ9HC84 5762 aaPredicted RBP2.46□□□□□ -2.02
CALCOCO2-202ENST00000372317 AHNAKQ09666 5890 aaKnown RBP2.45□□□□□ -2.02
CALCOCO2-202ENST00000372317 PRM1P04553 51 aa2.4□□□□□ -2.03
CALCOCO2-202ENST00000372317 KRTAP21-2Q3LI59 83 aa2.27□□□□□ -2.05
CALCOCO2-202ENST00000372317 PHGR1C9JFL3 82 aa1.99□□□□□ -2.09
CALCOCO2-202ENST00000372317 MUC19Q7Z5P9 8384 aa1.75□□□□□ -2.13
CALCOCO2-202ENST00000372317 KRTAP21-1Q3LI58 79 aa1.41□□□□□ -2.18
CALCOCO2-202ENST00000372317 MUC16Q8WXI7 14507 aa1.3□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 5.8 ms