RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 DCHS1Q96JQ0 3298 aa-2.33□□□□□ -2.78
ECHDC1-201ENST00000368287 AGLP35573 1532 aa-2.34□□□□□ -2.78
ECHDC1-201ENST00000368287 NRXN3Q9Y4C0 1643 aa-2.35□□□□□ -2.78
ECHDC1-201ENST00000368287 SMIM2Q9BVW6 85 aa-2.35□□□□□ -2.79
ECHDC1-201ENST00000368287 PLNP26678 52 aa-2.36□□□□□ -2.79
ECHDC1-201ENST00000368287 EFCAB5A4FU69 1503 aa-2.38□□□□□ -2.79
ECHDC1-201ENST00000368287 CPS1P31327 1500 aa-2.39□□□□□ -2.79
ECHDC1-201ENST00000368287 TRPM2O94759 1503 aa-2.41□□□□□ -2.79
ECHDC1-201ENST00000368287 DNAH14Q0VDD8 3507 aa-2.42□□□□□ -2.8
ECHDC1-201ENST00000368287 CLTCL1P53675 1640 aa-2.43□□□□□ -2.8
ECHDC1-201ENST00000368287 ABCA5Q8WWZ7 1642 aa-2.43□□□□□ -2.8
ECHDC1-201ENST00000368287 CFAP47Q6ZTR5 3102 aa-2.44□□□□□ -2.8
ECHDC1-201ENST00000368287 DEFB133Q30KQ1 61 aa-2.44□□□□□ -2.8
ECHDC1-201ENST00000368287 ABCA10Q8WWZ4 1543 aa-2.44□□□□□ -2.8
ECHDC1-201ENST00000368287 RHPN1-AS1Q9BWJ2 59 aa-2.45□□□□□ -2.8
ECHDC1-201ENST00000368287 MKI67P46013 3256 aaKnown RBP-2.46□□□□□ -2.8
ECHDC1-201ENST00000368287 DNAH12Q6ZR08 3092 aa-2.48□□□□□ -2.81
ECHDC1-201ENST00000368287 A0A087WWC5 75 aa-2.48□□□□□ -2.81
ECHDC1-201ENST00000368287 USP34Q70CQ2 3546 aa-2.48□□□□□ -2.81
ECHDC1-201ENST00000368287 DDX60Q8IY21 1712 aaKnown RBP-2.48□□□□□ -2.81
ECHDC1-201ENST00000368287 LINC01590Q5TEZ4 76 aa-2.5□□□□□ -2.81
ECHDC1-201ENST00000368287 TOMM7Q9P0U1 55 aa-2.51□□□□□ -2.81
ECHDC1-201ENST00000368287 PRXQ9BXM0 1461 aa-2.52□□□□□ -2.81
ECHDC1-201ENST00000368287 NDUFA1O15239 70 aa-2.52□□□□□ -2.81
ECHDC1-201ENST00000368287 CD52P31358 61 aa-2.52□□□□□ -2.81
ECHDC1-201ENST00000368287 UNC80Q8N2C7 3258 aa-2.52□□□□□ -2.81
ECHDC1-201ENST00000368287 NFAT5O94916 1531 aa-2.52□□□□□ -2.81
ECHDC1-201ENST00000368287 IQGAP1P46940 1657 aa-2.53□□□□□ -2.81
ECHDC1-201ENST00000368287 HTN1P15515 57 aa-2.54□□□□□ -2.82
ECHDC1-201ENST00000368287 KRTAP19-2Q3LHN2 52 aa-2.54□□□□□ -2.82
ECHDC1-201ENST00000368287 LOC400499M0QZD8 3231 aa-2.55□□□□□ -2.82
ECHDC1-201ENST00000368287 SMIM5Q71RC9 77 aa-2.55□□□□□ -2.82
ECHDC1-201ENST00000368287 XIRP2A4UGR9 3374 aa-2.56□□□□□ -2.82
ECHDC1-201ENST00000368287 A0A096LNI7 61 aa-2.58□□□□□ -2.82
ECHDC1-201ENST00000368287 ADCY10Q96PN6 1610 aa-2.6□□□□□ -2.83
ECHDC1-201ENST00000368287 CMC2Q9NRP2 79 aa-2.6□□□□□ -2.83
ECHDC1-201ENST00000368287 ABCC8Q09428 1581 aa-2.61□□□□□ -2.83
ECHDC1-201ENST00000368287 FANCD2Q9BXW9 1451 aa-2.61□□□□□ -2.83
ECHDC1-201ENST00000368287 ASPMQ8IZT6 3477 aa-2.66□□□□□ -2.84
ECHDC1-201ENST00000368287 DEFB124Q8NES8 71 aa-2.67□□□□□ -2.84
ECHDC1-201ENST00000368287 VCANP13611 3396 aa-2.7□□□□□ -2.84
ECHDC1-201ENST00000368287 DUOX1Q9NRD9 1551 aa-2.72□□□□□ -2.84
ECHDC1-201ENST00000368287 CENPFP49454 3210 aa-2.72□□□□□ -2.85
ECHDC1-201ENST00000368287 BRCA2P51587 3418 aa-2.73□□□□□ -2.85
ECHDC1-201ENST00000368287 ERICH3Q5RHP9 1530 aa-2.75□□□□□ -2.85
ECHDC1-201ENST00000368287 SAMD9LQ8IVG5 1584 aa-2.78□□□□□ -2.85
ECHDC1-201ENST00000368287 CDH23Q9H251 3354 aa-2.78□□□□□ -2.85
ECHDC1-201ENST00000368287 RPL39P62891 51 aaKnown RBP-2.79□□□□□ -2.86
ECHDC1-201ENST00000368287 TOP2AP11388 1531 aaKnown RBP-2.81□□□□□ -2.86
ECHDC1-201ENST00000368287 VPS13AQ96RL7 3174 aa-2.87□□□□□ -2.87
ECHDC1-201ENST00000368287 LINC01556Q5JQF7 62 aa-2.87□□□□□ -2.87
ECHDC1-201ENST00000368287 RPL39LQ96EH5 51 aaKnown RBP-2.88□□□□□ -2.87
ECHDC1-201ENST00000368287 ATP7AQ04656 1500 aa-2.91□□□□□ -2.88
ECHDC1-201ENST00000368287 H3BUX3 64 aa-2.94□□□□□ -2.88
ECHDC1-201ENST00000368287 DEFB104AQ8WTQ1 72 aa-2.95□□□□□ -2.88
ECHDC1-201ENST00000368287 MROH2BQ7Z745 1585 aa-2.95□□□□□ -2.88
ECHDC1-201ENST00000368287 SMIM31A0A1B0GVY4 71 aa-2.97□□□□□ -2.88
ECHDC1-201ENST00000368287 SNRPGP15A8MWD9 76 aa-3□□□□□ -2.89
ECHDC1-201ENST00000368287 IQGAP2Q13576 1575 aa-3.11□□□□□ -2.91
ECHDC1-201ENST00000368287 UTRNP46939 3433 aa-3.13□□□□□ -2.91
ECHDC1-201ENST00000368287 K7EIM0 57 aa-3.16□□□□□ -2.92
ECHDC1-201ENST00000368287 TOMM5Q8N4H5 51 aa-3.16□□□□□ -2.92
ECHDC1-201ENST00000368287 APELAP0DMC3 54 aa-3.18□□□□□ -2.92
ECHDC1-201ENST00000368287 A0A096LPF7 62 aa-3.21□□□□□ -2.92
ECHDC1-201ENST00000368287 ARHGAP5-AS1Q96IT6 56 aa-3.26□□□□□ -2.93
ECHDC1-201ENST00000368287 PRCDQ00LT1 54 aa-3.28□□□□□ -2.93
ECHDC1-201ENST00000368287 TMEM167AQ8TBQ9 72 aa-3.34□□□□□ -2.94
ECHDC1-201ENST00000368287 HTN3P15516 51 aa-3.36□□□□□ -2.95
ECHDC1-201ENST00000368287 Q9Y3F1 56 aa-3.51□□□□□ -2.97
ECHDC1-201ENST00000368287 SNRPGP62308 76 aaKnown RBP-3.53□□□□□ -2.97
ECHDC1-201ENST00000368287 GOLGB1Q14789 3259 aaKnown RBP-3.54□□□□□ -2.98
ECHDC1-201ENST00000368287 GCC2Q8IWJ2 1684 aa-3.56□□□□□ -2.98
ECHDC1-201ENST00000368287 RPL39P5Q59GN2 51 aa-3.6□□□□□ -2.99
ECHDC1-201ENST00000368287 DEFB108AA8MXU0 73 aa-3.65□□□□□ -2.99
ECHDC1-201ENST00000368287 H3BSH0 61 aa-3.65□□□□□ -2.99
ECHDC1-201ENST00000368287 COX14Q96I36 57 aa-3.74□□□□□ -3.01
ECHDC1-201ENST00000368287 DEFB108BQ8NET1 73 aa-3.92□□□□□ -3.04
ECHDC1-201ENST00000368287 STATHP02808 62 aa-4.32□□□□□ -3.1
Retrieved 78 of 20,778 RNA–protein pairs in 80.7 ms