RNA–Protein interactions for RNA: ENST00000367893.4

LMX1A-203, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1A, Length 1,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-203ENST00000367893 SPRR2DP22532 72 aa4.85□□□□□ -1.63
LMX1A-203ENST00000367893 PMAIP1Q13794 54 aa4.84□□□□□ -1.63
LMX1A-203ENST00000367893 LCE3AQ5TA76 89 aa4.82□□□□□ -1.64
LMX1A-203ENST00000367893 KRTAP23-1A1A580 65 aa4.81□□□□□ -1.64
LMX1A-203ENST00000367893 KRTAP19-7Q3SYF9 63 aa4.74□□□□□ -1.65
LMX1A-203ENST00000367893 LCE3BQ5TA77 95 aa4.73□□□□□ -1.65
LMX1A-203ENST00000367893 PP632Q6XCG6 107 aa4.72□□□□□ -1.65
LMX1A-203ENST00000367893 KRTAP19-5Q3LI72 72 aa4.71□□□□□ -1.66
LMX1A-203ENST00000367893 MT1EP04732 61 aa4.67□□□□□ -1.66
LMX1A-203ENST00000367893 KRTAP12-3P60328 96 aa4.64□□□□□ -1.67
LMX1A-203ENST00000367893 LCE5AQ5TCM9 118 aa4.58□□□□□ -1.68
LMX1A-203ENST00000367893 KTN1-AS1Q86SY8 53 aa4.57□□□□□ -1.68
LMX1A-203ENST00000367893 PRAC1Q96KF2 57 aa4.55□□□□□ -1.68
LMX1A-203ENST00000367893 KRTAP19-3Q7Z4W3 81 aa4.54□□□□□ -1.68
LMX1A-203ENST00000367893 MT1LQ93083 61 aa4.54□□□□□ -1.68
LMX1A-203ENST00000367893 DSTQ03001 7570 aaKnown RBP4.52□□□□□ -1.69
LMX1A-203ENST00000367893 KRTAP15-1Q3LI76 137 aa4.49□□□□□ -1.69
LMX1A-203ENST00000367893 GPR98Q8WXG9 6306 aa4.49□□□□□ -1.69
LMX1A-203ENST00000367893 MT1GP13640 62 aa4.48□□□□□ -1.69
LMX1A-203ENST00000367893 KRTAP19-4Q3LI73 84 aa4.46□□□□□ -1.7
LMX1A-203ENST00000367893 KRTAP4-9Q9BYQ8 210 aa4.46□□□□□ -1.7
LMX1A-203ENST00000367893 MT1MQ8N339 61 aa4.41□□□□□ -1.7
LMX1A-203ENST00000367893 LCE1DQ5T752 114 aa4.35□□□□□ -1.71
LMX1A-203ENST00000367893 HMCN1Q96RW7 5635 aa4.34□□□□□ -1.72
LMX1A-203ENST00000367893 LCE3CQ5T5A8 94 aa4.33□□□□□ -1.72
LMX1A-203ENST00000367893 KRTAP4-7Q9BYR0 210 aa4.32□□□□□ -1.72
LMX1A-203ENST00000367893 LCE4AQ5TA78 99 aa4.29□□□□□ -1.72
LMX1A-203ENST00000367893 SVIPQ8NHG7 77 aa4.27□□□□□ -1.73
LMX1A-203ENST00000367893 KRTAP4-3Q9BYR4 195 aa4.27□□□□□ -1.73
LMX1A-203ENST00000367893 MT4P47944 62 aa4.25□□□□□ -1.73
LMX1A-203ENST00000367893 KRTAP5-4Q6L8H1 288 aa4.23□□□□□ -1.73
LMX1A-203ENST00000367893 AHNAK2Q8IVF2 5795 aa4.21□□□□□ -1.74
LMX1A-203ENST00000367893 KRTAP4-12Q9BQ66 201 aa4.21□□□□□ -1.74
LMX1A-203ENST00000367893 KRTAP9-9Q9BYP9 154 aa4.17□□□□□ -1.74
LMX1A-203ENST00000367893 KRTAP9-4Q9BYQ2 154 aa4.17□□□□□ -1.74
LMX1A-203ENST00000367893 KRTAP5-10Q6L8G5 202 aa4.14□□□□□ -1.75
LMX1A-203ENST00000367893 SPRR5A0A1B0GTR4 108 aa4.1□□□□□ -1.75
LMX1A-203ENST00000367893 KRTAP9-6A8MVA2 160 aa4.09□□□□□ -1.75
LMX1A-203ENST00000367893 KRTAP5-5Q701N2 237 aaPredicted RBP4.04□□□□□ -1.76
LMX1A-203ENST00000367893 KRTAP20-2Q3LI61 65 aa3.99□□□□□ -1.77
LMX1A-203ENST00000367893 KRTAP5-3Q6L8H2 238 aa3.99□□□□□ -1.77
LMX1A-203ENST00000367893 KRTAP5-7Q6L8G8 165 aa3.98□□□□□ -1.77
LMX1A-203ENST00000367893 KRTAP12-4P60329 112 aa3.88□□□□□ -1.79
LMX1A-203ENST00000367893 SYNE1Q8NF91 8797 aaKnown RBP3.87□□□□□ -1.79
LMX1A-203ENST00000367893 MT1AP04731 61 aa3.87□□□□□ -1.79
LMX1A-203ENST00000367893 KRTAP4-2Q9BYR5 136 aa3.83□□□□□ -1.8
LMX1A-203ENST00000367893 KRTAP6-1Q3LI64 71 aa3.82□□□□□ -1.8
LMX1A-203ENST00000367893 LUZP6Q538Z0 58 aa3.74□□□□□ -1.81
LMX1A-203ENST00000367893 KRTAP4-11Q9BYQ6 195 aa3.7□□□□□ -1.82
LMX1A-203ENST00000367893 KRTAP5-2Q701N4 177 aa3.7□□□□□ -1.82
LMX1A-203ENST00000367893 H3BS24 57 aa3.64□□□□□ -1.83
LMX1A-203ENST00000367893 KRTAP5-8O75690 187 aa3.57□□□□□ -1.84
LMX1A-203ENST00000367893 KRTAP6-2Q3LI66 62 aa3.55□□□□□ -1.84
LMX1A-203ENST00000367893 MUC5BQ9HC84 5762 aaPredicted RBP3.51□□□□□ -1.85
LMX1A-203ENST00000367893 MT3P25713 68 aa3.5□□□□□ -1.85
LMX1A-203ENST00000367893 MUC5ACP98088 5654 aa3.49□□□□□ -1.85
LMX1A-203ENST00000367893 AHNAKQ09666 5890 aaKnown RBP3.49□□□□□ -1.85
LMX1A-203ENST00000367893 NDUFAF8A1L188 74 aa3.46□□□□□ -1.85
LMX1A-203ENST00000367893 OBSCNQ5VST9 7968 aa3.43□□□□□ -1.86
LMX1A-203ENST00000367893 KRTAP5-1Q6L8H4 278 aa3.35□□□□□ -1.87
LMX1A-203ENST00000367893 A0A0A0MQY5 61 aa3.28□□□□□ -1.88
LMX1A-203ENST00000367893 LCE3DQ9BYE3 92 aa3.19□□□□□ -1.9
LMX1A-203ENST00000367893 LCE1EQ5T753 118 aa3.15□□□□□ -1.91
LMX1A-203ENST00000367893 LCE3EQ5T5B0 92 aa3.09□□□□□ -1.91
LMX1A-203ENST00000367893 LCE1CQ5T751 118 aa2.92□□□□□ -1.94
LMX1A-203ENST00000367893 LCE1BQ5T7P3 118 aa2.92□□□□□ -1.94
LMX1A-203ENST00000367893 INE1O15225 51 aa2.9□□□□□ -1.95
LMX1A-203ENST00000367893 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.73□□□□□ -1.97
LMX1A-203ENST00000367893 KRTAP5-11Q6L8G4 156 aa2.65□□□□□ -1.99
LMX1A-203ENST00000367893 LCE1FQ5T754 118 aa2.59□□□□□ -2
LMX1A-203ENST00000367893 PRM1P04553 51 aa2.56□□□□□ -2
LMX1A-203ENST00000367893 KRTAP21-2Q3LI59 83 aa2.52□□□□□ -2.01
LMX1A-203ENST00000367893 PHGR1C9JFL3 82 aa2.38□□□□□ -2.03
LMX1A-203ENST00000367893 KRTAP4-4Q9BYR3 166 aa2.22□□□□□ -2.05
LMX1A-203ENST00000367893 MUC19Q7Z5P9 8384 aa2.15□□□□□ -2.07
LMX1A-203ENST00000367893 KRTAP21-1Q3LI58 79 aa1.81□□□□□ -2.12
LMX1A-203ENST00000367893 MUC16Q8WXI7 14507 aa1.55□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 35.8 ms