RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 KRTAP25-1Q3LHN0 102 aa3.69□□□□□ -1.82
HMGB1P39-201ENST00000366304 C8orf17Q9NRJ1 99 aa3.69□□□□□ -1.82
HMGB1P39-201ENST00000366304 DMAC1Q96GE9 116 aa3.67□□□□□ -1.82
HMGB1P39-201ENST00000366304 MMP24-AS1A0A0U1RRL7 71 aa3.66□□□□□ -1.82
HMGB1P39-201ENST00000366304 KRTAP8-1Q8IUC2 63 aa3.65□□□□□ -1.83
HMGB1P39-201ENST00000366304 MRPL34Q9BQ48 92 aaKnown RBP3.64□□□□□ -1.83
HMGB1P39-201ENST00000366304 K7ERS5 55 aa3.61□□□□□ -1.83
HMGB1P39-201ENST00000366304 MT1XP80297 61 aa3.58□□□□□ -1.84
HMGB1P39-201ENST00000366304 DSTQ03001 7570 aaKnown RBP3.57□□□□□ -1.84
HMGB1P39-201ENST00000366304 Q5W150 140 aa3.55□□□□□ -1.84
HMGB1P39-201ENST00000366304 P0C880 135 aa3.53□□□□□ -1.84
HMGB1P39-201ENST00000366304 LCE1FQ5T754 118 aa3.53□□□□□ -1.84
HMGB1P39-201ENST00000366304 KRTAP12-2P59991 146 aa3.51□□□□□ -1.85
HMGB1P39-201ENST00000366304 HMCN1Q96RW7 5635 aa3.51□□□□□ -1.85
HMGB1P39-201ENST00000366304 KRTAP10-12P60413 245 aa3.49□□□□□ -1.85
HMGB1P39-201ENST00000366304 SPINT4Q6UDR6 99 aa3.48□□□□□ -1.85
HMGB1P39-201ENST00000366304 AHNAK2Q8IVF2 5795 aa3.47□□□□□ -1.85
HMGB1P39-201ENST00000366304 S4R3F8 94 aa3.47□□□□□ -1.85
HMGB1P39-201ENST00000366304 LUZP6Q538Z0 58 aa3.46□□□□□ -1.86
HMGB1P39-201ENST00000366304 PRO2289Q9P1D8 64 aa3.45□□□□□ -1.86
HMGB1P39-201ENST00000366304 NDUFAF8A1L188 74 aa3.44□□□□□ -1.86
HMGB1P39-201ENST00000366304 KRTAP5-10Q6L8G5 202 aa3.44□□□□□ -1.86
HMGB1P39-201ENST00000366304 A0A1B0GU33 70 aa3.43□□□□□ -1.86
HMGB1P39-201ENST00000366304 CRIPTQ9P021 101 aa3.42□□□□□ -1.86
HMGB1P39-201ENST00000366304 CAMK2N1Q7Z7J9 78 aa3.4□□□□□ -1.87
HMGB1P39-201ENST00000366304 KRTAP9-6A8MVA2 160 aa3.36□□□□□ -1.87
HMGB1P39-201ENST00000366304 H0YAA0 97 aa3.36□□□□□ -1.87
HMGB1P39-201ENST00000366304 MT4P47944 62 aa3.34□□□□□ -1.87
HMGB1P39-201ENST00000366304 LCE3CQ5T5A8 94 aa3.34□□□□□ -1.87
HMGB1P39-201ENST00000366304 KRTAP5-7Q6L8G8 165 aa3.34□□□□□ -1.87
HMGB1P39-201ENST00000366304 PLAC4Q8WY50 150 aa3.31□□□□□ -1.88
HMGB1P39-201ENST00000366304 KRTAP5-1Q6L8H4 278 aa3.28□□□□□ -1.88
HMGB1P39-201ENST00000366304 KRTAP19-7Q3SYF9 63 aa3.22□□□□□ -1.89
HMGB1P39-201ENST00000366304 KRTAP19-3Q7Z4W3 81 aa3.22□□□□□ -1.89
HMGB1P39-201ENST00000366304 SPRR5A0A1B0GTR4 108 aa3.21□□□□□ -1.9
HMGB1P39-201ENST00000366304 MT1EP04732 61 aa3.19□□□□□ -1.9
HMGB1P39-201ENST00000366304 KRTAP5-4Q6L8H1 288 aa3.19□□□□□ -1.9
HMGB1P39-201ENST00000366304 KRTAP4-4Q9BYR3 166 aa3.13□□□□□ -1.91
HMGB1P39-201ENST00000366304 R4GN34 69 aa3.13□□□□□ -1.91
HMGB1P39-201ENST00000366304 M0QZ58 72 aa3.12□□□□□ -1.91
HMGB1P39-201ENST00000366304 KRTAP4-3Q9BYR4 195 aa3.08□□□□□ -1.92
HMGB1P39-201ENST00000366304 C10orf95Q9H7T3 257 aa3.08□□□□□ -1.92
HMGB1P39-201ENST00000366304 MT1GP13640 62 aa3.06□□□□□ -1.92
HMGB1P39-201ENST00000366304 PP632Q6XCG6 107 aa3.06□□□□□ -1.92
HMGB1P39-201ENST00000366304 MT1MQ8N339 61 aa3.06□□□□□ -1.92
HMGB1P39-201ENST00000366304 LCE3EQ5T5B0 92 aa3.05□□□□□ -1.92
HMGB1P39-201ENST00000366304 INE1O15225 51 aa3.04□□□□□ -1.92
HMGB1P39-201ENST00000366304 AHNAKQ09666 5890 aaKnown RBP3.04□□□□□ -1.92
HMGB1P39-201ENST00000366304 KRTAP20-2Q3LI61 65 aa3.03□□□□□ -1.92
HMGB1P39-201ENST00000366304 A0A0D9SG42 100 aa3□□□□□ -1.93
HMGB1P39-201ENST00000366304 KRTAP19-5Q3LI72 72 aa3□□□□□ -1.93
HMGB1P39-201ENST00000366304 MUC5ACP98088 5654 aa2.99□□□□□ -1.93
HMGB1P39-201ENST00000366304 KRTAP12-1P59990 96 aa2.97□□□□□ -1.93
HMGB1P39-201ENST00000366304 MT1LQ93083 61 aa2.97□□□□□ -1.93
HMGB1P39-201ENST00000366304 KRTAP13-4Q3LI77 160 aa2.95□□□□□ -1.94
HMGB1P39-201ENST00000366304 MUC5BQ9HC84 5762 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P39-201ENST00000366304 KRTAP5-5Q701N2 237 aaPredicted RBP2.88□□□□□ -1.95
HMGB1P39-201ENST00000366304 LCE3AQ5TA76 89 aa2.87□□□□□ -1.95
HMGB1P39-201ENST00000366304 OBSCNQ5VST9 7968 aa2.85□□□□□ -1.95
HMGB1P39-201ENST00000366304 KRTAP5-8O75690 187 aa2.82□□□□□ -1.96
HMGB1P39-201ENST00000366304 KRTAP12-4P60329 112 aa2.8□□□□□ -1.96
HMGB1P39-201ENST00000366304 SYNE1Q8NF91 8797 aaKnown RBP2.78□□□□□ -1.97
HMGB1P39-201ENST00000366304 KRTAP5-2Q701N4 177 aa2.72□□□□□ -1.97
HMGB1P39-201ENST00000366304 TNP1P09430 55 aa2.7□□□□□ -1.98
HMGB1P39-201ENST00000366304 KRTAP12-3P60328 96 aa2.56□□□□□ -2
HMGB1P39-201ENST00000366304 KRTAP6-1Q3LI64 71 aa2.56□□□□□ -2
HMGB1P39-201ENST00000366304 KRTAP6-2Q3LI66 62 aa2.51□□□□□ -2.01
HMGB1P39-201ENST00000366304 MT1AP04731 61 aa2.49□□□□□ -2.01
HMGB1P39-201ENST00000366304 LCE1CQ5T751 118 aa2.47□□□□□ -2.01
HMGB1P39-201ENST00000366304 LCE1BQ5T7P3 118 aa2.47□□□□□ -2.01
HMGB1P39-201ENST00000366304 LCE3DQ9BYE3 92 aa2.46□□□□□ -2.02
HMGB1P39-201ENST00000366304 MUC19Q7Z5P9 8384 aa2□□□□□ -2.09
HMGB1P39-201ENST00000366304 PHGR1C9JFL3 82 aa1.99□□□□□ -2.09
HMGB1P39-201ENST00000366304 KRTAP21-2Q3LI59 83 aa1.78□□□□□ -2.12
HMGB1P39-201ENST00000366304 PRM1P04553 51 aa1.76□□□□□ -2.13
HMGB1P39-201ENST00000366304 KRTAP21-1Q3LI58 79 aa1.49□□□□□ -2.17
HMGB1P39-201ENST00000366304 MUC16Q8WXI7 14507 aa1.22□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 128.9 ms