RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 KTN1-AS1Q86SY8 53 aa5.17□□□□□ -1.58
TNFRSF1A-202ENST00000366159 H7BZZ5 65 aa5.13□□□□□ -1.59
TNFRSF1A-202ENST00000366159 MT1EP04732 61 aa5.11□□□□□ -1.59
TNFRSF1A-202ENST00000366159 SPATA8Q6RVD6 105 aa5.09□□□□□ -1.59
TNFRSF1A-202ENST00000366159 A0A0D9SG42 100 aa5.08□□□□□ -1.6
TNFRSF1A-202ENST00000366159 KRTAP19-3Q7Z4W3 81 aa5.07□□□□□ -1.6
TNFRSF1A-202ENST00000366159 A0A1B0GU33 70 aa5.06□□□□□ -1.6
TNFRSF1A-202ENST00000366159 KRTAP12-1P59990 96 aa5.04□□□□□ -1.6
TNFRSF1A-202ENST00000366159 Q1T7F1 81 aa5.04□□□□□ -1.6
TNFRSF1A-202ENST00000366159 SPINT4Q6UDR6 99 aa5.01□□□□□ -1.61
TNFRSF1A-202ENST00000366159 KRTAP19-5Q3LI72 72 aa4.98□□□□□ -1.61
TNFRSF1A-202ENST00000366159 MT1GP13640 62 aa4.96□□□□□ -1.62
TNFRSF1A-202ENST00000366159 GPR98Q8WXG9 6306 aa4.92□□□□□ -1.62
TNFRSF1A-202ENST00000366159 A0A1B0GU69 56 aa4.9□□□□□ -1.63
TNFRSF1A-202ENST00000366159 A8MU10 97 aa4.88□□□□□ -1.63
TNFRSF1A-202ENST00000366159 MT1MQ8N339 61 aa4.87□□□□□ -1.63
TNFRSF1A-202ENST00000366159 MT1LQ93083 61 aa4.87□□□□□ -1.63
TNFRSF1A-202ENST00000366159 PP632Q6XCG6 107 aa4.86□□□□□ -1.63
TNFRSF1A-202ENST00000366159 PRAC1Q96KF2 57 aa4.86□□□□□ -1.63
TNFRSF1A-202ENST00000366159 C10orf95Q9H7T3 257 aa4.84□□□□□ -1.63
TNFRSF1A-202ENST00000366159 LCE3AQ5TA76 89 aa4.82□□□□□ -1.64
TNFRSF1A-202ENST00000366159 KRTAP5-3Q6L8H2 238 aa4.81□□□□□ -1.64
TNFRSF1A-202ENST00000366159 HMCN1Q96RW7 5635 aa4.81□□□□□ -1.64
TNFRSF1A-202ENST00000366159 CDC42SE1Q9NRR8 79 aa4.8□□□□□ -1.64
TNFRSF1A-202ENST00000366159 TNP1P09430 55 aa4.78□□□□□ -1.64
TNFRSF1A-202ENST00000366159 PSPHP1O15172 72 aa4.76□□□□□ -1.65
TNFRSF1A-202ENST00000366159 KRTAP4-3Q9BYR4 195 aa4.75□□□□□ -1.65
TNFRSF1A-202ENST00000366159 KRTAP5-4Q6L8H1 288 aa4.72□□□□□ -1.65
TNFRSF1A-202ENST00000366159 LINC01558Q9Y6Z2 57 aa4.72□□□□□ -1.65
TNFRSF1A-202ENST00000366159 MT4P47944 62 aa4.7□□□□□ -1.66
TNFRSF1A-202ENST00000366159 PRR15LQ9BU68 103 aa4.7□□□□□ -1.66
TNFRSF1A-202ENST00000366159 A6NED7 52 aa4.68□□□□□ -1.66
TNFRSF1A-202ENST00000366159 KRTAP12-3P60328 96 aa4.64□□□□□ -1.67
TNFRSF1A-202ENST00000366159 AHNAK2Q8IVF2 5795 aa4.62□□□□□ -1.67
TNFRSF1A-202ENST00000366159 UQCR11O14957 56 aa4.58□□□□□ -1.68
TNFRSF1A-202ENST00000366159 MT3P25713 68 aa4.57□□□□□ -1.68
TNFRSF1A-202ENST00000366159 NDUFAF8A1L188 74 aa4.53□□□□□ -1.68
TNFRSF1A-202ENST00000366159 KRTAP5-10Q6L8G5 202 aa4.52□□□□□ -1.69
TNFRSF1A-202ENST00000366159 KRTAP5-5Q701N2 237 aaPredicted RBP4.51□□□□□ -1.69
TNFRSF1A-202ENST00000366159 KRTAP25-1Q3LHN0 102 aa4.49□□□□□ -1.69
TNFRSF1A-202ENST00000366159 ROMO1P60602 79 aa4.48□□□□□ -1.69
TNFRSF1A-202ENST00000366159 MIR22HGQ0VDD5 57 aa4.46□□□□□ -1.69
TNFRSF1A-202ENST00000366159 KRTAP20-2Q3LI61 65 aa4.44□□□□□ -1.7
TNFRSF1A-202ENST00000366159 SYNE1Q8NF91 8797 aaKnown RBP4.41□□□□□ -1.7
TNFRSF1A-202ENST00000366159 SPRR5A0A1B0GTR4 108 aa4.41□□□□□ -1.7
TNFRSF1A-202ENST00000366159 KRTAP5-7Q6L8G8 165 aa4.36□□□□□ -1.71
TNFRSF1A-202ENST00000366159 K7ERS5 55 aa4.34□□□□□ -1.71
TNFRSF1A-202ENST00000366159 KRTAP12-4P60329 112 aa4.33□□□□□ -1.72
TNFRSF1A-202ENST00000366159 LCE3CQ5T5A8 94 aa4.27□□□□□ -1.73
TNFRSF1A-202ENST00000366159 LUZP6Q538Z0 58 aa4.21□□□□□ -1.73
TNFRSF1A-202ENST00000366159 LCE1FQ5T754 118 aa4.2□□□□□ -1.74
TNFRSF1A-202ENST00000366159 MT1AP04731 61 aa4.14□□□□□ -1.75
TNFRSF1A-202ENST00000366159 KRTAP6-1Q3LI64 71 aa4.13□□□□□ -1.75
TNFRSF1A-202ENST00000366159 KRTAP5-2Q701N4 177 aa4.13□□□□□ -1.75
TNFRSF1A-202ENST00000366159 KRTAP9-6A8MVA2 160 aa4.08□□□□□ -1.76
TNFRSF1A-202ENST00000366159 OBSCNQ5VST9 7968 aa3.98□□□□□ -1.77
TNFRSF1A-202ENST00000366159 KRTAP5-8O75690 187 aa3.95□□□□□ -1.78
TNFRSF1A-202ENST00000366159 KRTAP6-2Q3LI66 62 aa3.95□□□□□ -1.78
TNFRSF1A-202ENST00000366159 MUC5BQ9HC84 5762 aaPredicted RBP3.86□□□□□ -1.79
TNFRSF1A-202ENST00000366159 AHNAKQ09666 5890 aaKnown RBP3.82□□□□□ -1.8
TNFRSF1A-202ENST00000366159 MUC5ACP98088 5654 aa3.82□□□□□ -1.8
TNFRSF1A-202ENST00000366159 LCE1EQ5T753 118 aa3.81□□□□□ -1.8
TNFRSF1A-202ENST00000366159 KRTAP5-1Q6L8H4 278 aa3.71□□□□□ -1.81
TNFRSF1A-202ENST00000366159 KRTAP5-11Q6L8G4 156 aa3.62□□□□□ -1.83
TNFRSF1A-202ENST00000366159 LCE3EQ5T5B0 92 aa3.56□□□□□ -1.84
TNFRSF1A-202ENST00000366159 INE1O15225 51 aa3.55□□□□□ -1.84
TNFRSF1A-202ENST00000366159 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.55□□□□□ -1.84
TNFRSF1A-202ENST00000366159 LCE1CQ5T751 118 aa3.27□□□□□ -1.89
TNFRSF1A-202ENST00000366159 LCE1BQ5T7P3 118 aa3.27□□□□□ -1.89
TNFRSF1A-202ENST00000366159 LCE3DQ9BYE3 92 aa3.05□□□□□ -1.92
TNFRSF1A-202ENST00000366159 KRTAP4-4Q9BYR3 166 aa2.95□□□□□ -1.94
TNFRSF1A-202ENST00000366159 KRTAP21-2Q3LI59 83 aa2.74□□□□□ -1.97
TNFRSF1A-202ENST00000366159 PHGR1C9JFL3 82 aa2.6□□□□□ -1.99
TNFRSF1A-202ENST00000366159 MUC19Q7Z5P9 8384 aa2.44□□□□□ -2.02
TNFRSF1A-202ENST00000366159 PRM1P04553 51 aa2.08□□□□□ -2.08
TNFRSF1A-202ENST00000366159 KRTAP21-1Q3LI58 79 aa1.98□□□□□ -2.09
TNFRSF1A-202ENST00000366159 MUC16Q8WXI7 14507 aa1.75□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 10.9 ms