RNA–Protein interactions for RNA: ENST00000364033.1

RNU1-42P-201, Transcript of RNA, U1 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU1-42P, Length 160 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-42P-201ENST00000364033 KRTAP10-5P60370 271 aa0.67□□□□□ -2.3
RNU1-42P-201ENST00000364033 SPRR2FQ96RM1 72 aa0.67□□□□□ -2.3
RNU1-42P-201ENST00000364033 C10orf95Q9H7T3 257 aa0.67□□□□□ -2.3
RNU1-42P-201ENST00000364033 DSTQ03001 7570 aaKnown RBP0.67□□□□□ -2.3
RNU1-42P-201ENST00000364033 KRTAP4-8A0A0G2JLE6 195 aa0.66□□□□□ -2.3
RNU1-42P-201ENST00000364033 KRTAP19-8Q3LI54 63 aa0.66□□□□□ -2.3
RNU1-42P-201ENST00000364033 KRTAP4-8Q9BYQ9 185 aa0.66□□□□□ -2.3
RNU1-42P-201ENST00000364033 AHNAK2Q8IVF2 5795 aa0.66□□□□□ -2.3
RNU1-42P-201ENST00000364033 KRTAP5-9P26371 169 aa0.65□□□□□ -2.31
RNU1-42P-201ENST00000364033 KRTAP8-1Q8IUC2 63 aa0.65□□□□□ -2.31
RNU1-42P-201ENST00000364033 SPRR2GQ9BYE4 73 aa0.65□□□□□ -2.31
RNU1-42P-201ENST00000364033 SPRR2DP22532 72 aa0.64□□□□□ -2.31
RNU1-42P-201ENST00000364033 LCE1AQ5T7P2 110 aa0.64□□□□□ -2.31
RNU1-42P-201ENST00000364033 KRTAP5-3Q6L8H2 238 aa0.64□□□□□ -2.31
RNU1-42P-201ENST00000364033 KRTAP10-7P60409 375 aaPredicted RBP0.63□□□□□ -2.31
RNU1-42P-201ENST00000364033 MT1XP80297 61 aa0.63□□□□□ -2.31
RNU1-42P-201ENST00000364033 LCE3BQ5TA77 95 aa0.63□□□□□ -2.31
RNU1-42P-201ENST00000364033 LCE1DQ5T752 114 aa0.62□□□□□ -2.31
RNU1-42P-201ENST00000364033 KRTAP4-2Q9BYR5 136 aa0.62□□□□□ -2.31
RNU1-42P-201ENST00000364033 PRO2289Q9P1D8 64 aa0.62□□□□□ -2.31
RNU1-42P-201ENST00000364033 KRTAP19-4Q3LI73 84 aa0.61□□□□□ -2.31
RNU1-42P-201ENST00000364033 KRTAP4-7Q9BYR0 210 aa0.61□□□□□ -2.31
RNU1-42P-201ENST00000364033 INE1O15225 51 aa0.6□□□□□ -2.31
RNU1-42P-201ENST00000364033 AHNAKQ09666 5890 aaKnown RBP0.59□□□□□ -2.31
RNU1-42P-201ENST00000364033 HMCN1Q96RW7 5635 aa0.59□□□□□ -2.31
RNU1-42P-201ENST00000364033 MT4P47944 62 aa0.59□□□□□ -2.31
RNU1-42P-201ENST00000364033 KRTAP10-12P60413 245 aa0.59□□□□□ -2.31
RNU1-42P-201ENST00000364033 KRTAP5-4Q6L8H1 288 aa0.59□□□□□ -2.31
RNU1-42P-201ENST00000364033 MUC5BQ9HC84 5762 aaPredicted RBP0.59□□□□□ -2.32
RNU1-42P-201ENST00000364033 MUC5ACP98088 5654 aa0.58□□□□□ -2.32
RNU1-42P-201ENST00000364033 KRTAP12-3P60328 96 aa0.58□□□□□ -2.32
RNU1-42P-201ENST00000364033 KRTAP4-3Q9BYR4 195 aa0.58□□□□□ -2.32
RNU1-42P-201ENST00000364033 KRTAP19-5Q3LI72 72 aa0.57□□□□□ -2.32
RNU1-42P-201ENST00000364033 KRTAP19-7Q3SYF9 63 aa0.57□□□□□ -2.32
RNU1-42P-201ENST00000364033 LCE3AQ5TA76 89 aa0.57□□□□□ -2.32
RNU1-42P-201ENST00000364033 LCE5AQ5TCM9 118 aa0.57□□□□□ -2.32
RNU1-42P-201ENST00000364033 KRTAP4-6Q9BYQ5 205 aa0.57□□□□□ -2.32
RNU1-42P-201ENST00000364033 MT1EP04732 61 aa0.56□□□□□ -2.32
RNU1-42P-201ENST00000364033 LCE3CQ5T5A8 94 aa0.56□□□□□ -2.32
RNU1-42P-201ENST00000364033 KRTAP19-3Q7Z4W3 81 aa0.56□□□□□ -2.32
RNU1-42P-201ENST00000364033 KRTAP9-9Q9BYP9 154 aa0.55□□□□□ -2.32
RNU1-42P-201ENST00000364033 LOC100996750A0A140TA64 210 aa0.54□□□□□ -2.32
RNU1-42P-201ENST00000364033 MT1GP13640 62 aa0.54□□□□□ -2.32
RNU1-42P-201ENST00000364033 LCE4AQ5TA78 99 aa0.54□□□□□ -2.32
RNU1-42P-201ENST00000364033 MT1MQ8N339 61 aa0.54□□□□□ -2.32
RNU1-42P-201ENST00000364033 MT1LQ93083 61 aa0.53□□□□□ -2.32
RNU1-42P-201ENST00000364033 KRTAP5-8O75690 187 aa0.52□□□□□ -2.33
RNU1-42P-201ENST00000364033 SYNE1Q8NF91 8797 aaKnown RBP0.52□□□□□ -2.33
RNU1-42P-201ENST00000364033 KRTAP20-2Q3LI61 65 aa0.51□□□□□ -2.33
RNU1-42P-201ENST00000364033 KRTAP4-11Q9BYQ6 195 aa0.5□□□□□ -2.33
RNU1-42P-201ENST00000364033 KRTAP12-4P60329 112 aa0.49□□□□□ -2.33
RNU1-42P-201ENST00000364033 OBSCNQ5VST9 7968 aa0.48□□□□□ -2.33
RNU1-42P-201ENST00000364033 KRTAP5-5Q701N2 237 aaPredicted RBP0.48□□□□□ -2.33
RNU1-42P-201ENST00000364033 KRTAP6-1Q3LI64 71 aa0.47□□□□□ -2.33
RNU1-42P-201ENST00000364033 KRTAP5-2Q701N4 177 aa0.47□□□□□ -2.33
RNU1-42P-201ENST00000364033 KRTAP9-6A8MVA2 160 aa0.46□□□□□ -2.34
RNU1-42P-201ENST00000364033 MT1AP04731 61 aa0.46□□□□□ -2.34
RNU1-42P-201ENST00000364033 KRTAP6-2Q3LI66 62 aa0.46□□□□□ -2.34
RNU1-42P-201ENST00000364033 PHGR1C9JFL3 82 aa0.45□□□□□ -2.34
RNU1-42P-201ENST00000364033 LCE3DQ9BYE3 92 aa0.45□□□□□ -2.34
RNU1-42P-201ENST00000364033 KRTAP9-4Q9BYQ2 154 aa0.45□□□□□ -2.34
RNU1-42P-201ENST00000364033 LCE3EQ5T5B0 92 aa0.44□□□□□ -2.34
RNU1-42P-201ENST00000364033 MT3P25713 68 aa0.42□□□□□ -2.34
RNU1-42P-201ENST00000364033 LCE1BQ5T7P3 118 aa0.41□□□□□ -2.34
RNU1-42P-201ENST00000364033 KRTAP5-1Q6L8H4 278 aa0.41□□□□□ -2.34
RNU1-42P-201ENST00000364033 KRTAP4-12Q9BQ66 201 aa0.41□□□□□ -2.34
RNU1-42P-201ENST00000364033 PRM1P04553 51 aa0.38□□□□□ -2.35
RNU1-42P-201ENST00000364033 KRTAP4-4Q9BYR3 166 aa0.37□□□□□ -2.35
RNU1-42P-201ENST00000364033 LCE1EQ5T753 118 aa0.36□□□□□ -2.35
RNU1-42P-201ENST00000364033 KRTAP21-1Q3LI58 79 aa0.34□□□□□ -2.36
RNU1-42P-201ENST00000364033 LCE1CQ5T751 118 aa0.34□□□□□ -2.36
RNU1-42P-201ENST00000364033 LCE1FQ5T754 118 aa0.34□□□□□ -2.36
RNU1-42P-201ENST00000364033 KRTAP5-11Q6L8G4 156 aa0.33□□□□□ -2.36
RNU1-42P-201ENST00000364033 KRTAP21-2Q3LI59 83 aa0.29□□□□□ -2.36
RNU1-42P-201ENST00000364033 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.29□□□□□ -2.36
RNU1-42P-201ENST00000364033 MUC19Q7Z5P9 8384 aa0.28□□□□□ -2.37
RNU1-42P-201ENST00000364033 MUC16Q8WXI7 14507 aa0.22□□□□□ -2.37
Retrieved 77 of 20,778 RNA–protein pairs in 47.6 ms