RNA–Protein interactions for RNA: ENST00000354433.7

CDRT1-202, CMT1A duplicated region transcript 1, humanhuman

TSL 2 BASIC

Gene CDRT1, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-202ENST00000354433 SPRR2FQ96RM1 72 aa4.77□□□□□ -1.65
CDRT1-202ENST00000354433 C10orf95Q9H7T3 257 aa4.77□□□□□ -1.65
CDRT1-202ENST00000354433 KRTAP4-11Q9BYQ6 195 aa4.74□□□□□ -1.65
CDRT1-202ENST00000354433 KRTAP25-1Q3LHN0 102 aa4.74□□□□□ -1.65
CDRT1-202ENST00000354433 KRTAP8-1Q8IUC2 63 aa4.74□□□□□ -1.65
CDRT1-202ENST00000354433 SPRR2EP22531 72 aa4.7□□□□□ -1.66
CDRT1-202ENST00000354433 SPRR2BP35325 72 aa4.7□□□□□ -1.66
CDRT1-202ENST00000354433 SPRR2AP35326 72 aa4.7□□□□□ -1.66
CDRT1-202ENST00000354433 LCE5AQ5TCM9 118 aa4.69□□□□□ -1.66
CDRT1-202ENST00000354433 TNP1P09430 55 aa4.63□□□□□ -1.67
CDRT1-202ENST00000354433 KRTAP2-3P0C7H8 128 aa4.63□□□□□ -1.67
CDRT1-202ENST00000354433 KRTAP2-4Q9BYR9 128 aa4.63□□□□□ -1.67
CDRT1-202ENST00000354433 KRTAP10-7P60409 375 aaPredicted RBP4.61□□□□□ -1.67
CDRT1-202ENST00000354433 LCE1AQ5T7P2 110 aa4.59□□□□□ -1.67
CDRT1-202ENST00000354433 KRTAP23-1A1A580 65 aa4.58□□□□□ -1.68
CDRT1-202ENST00000354433 PP632Q6XCG6 107 aa4.58□□□□□ -1.68
CDRT1-202ENST00000354433 A0A0A0MQY5 61 aa4.55□□□□□ -1.68
CDRT1-202ENST00000354433 SPRR2DP22532 72 aa4.55□□□□□ -1.68
CDRT1-202ENST00000354433 KRTAP10-12P60413 245 aa4.55□□□□□ -1.68
CDRT1-202ENST00000354433 KRTAP2-2Q9BYT5 123 aa4.49□□□□□ -1.69
CDRT1-202ENST00000354433 KRTAP2-1Q9BYU5 128 aa4.49□□□□□ -1.69
CDRT1-202ENST00000354433 LCE3AQ5TA76 89 aa4.38□□□□□ -1.71
CDRT1-202ENST00000354433 KRTAP19-7Q3SYF9 63 aa4.29□□□□□ -1.72
CDRT1-202ENST00000354433 DSTQ03001 7570 aaKnown RBP4.28□□□□□ -1.72
CDRT1-202ENST00000354433 MT1EP04732 61 aa4.27□□□□□ -1.73
CDRT1-202ENST00000354433 KRTAP19-3Q7Z4W3 81 aa4.26□□□□□ -1.73
CDRT1-202ENST00000354433 KRTAP5-3Q6L8H2 238 aa4.25□□□□□ -1.73
CDRT1-202ENST00000354433 KRTAP12-3P60328 96 aa4.23□□□□□ -1.73
CDRT1-202ENST00000354433 KRTAP15-1Q3LI76 137 aa4.21□□□□□ -1.74
CDRT1-202ENST00000354433 KRTAP19-5Q3LI72 72 aa4.19□□□□□ -1.74
CDRT1-202ENST00000354433 MT1GP13640 62 aa4.14□□□□□ -1.75
CDRT1-202ENST00000354433 SPRR5A0A1B0GTR4 108 aa4.07□□□□□ -1.76
CDRT1-202ENST00000354433 MT1MQ8N339 61 aa4.07□□□□□ -1.76
CDRT1-202ENST00000354433 MT1LQ93083 61 aa4.07□□□□□ -1.76
CDRT1-202ENST00000354433 GPR98Q8WXG9 6306 aa4.02□□□□□ -1.77
CDRT1-202ENST00000354433 MT4P47944 62 aa4□□□□□ -1.77
CDRT1-202ENST00000354433 KRTAP4-3Q9BYR4 195 aa3.98□□□□□ -1.77
CDRT1-202ENST00000354433 LCE3CQ5T5A8 94 aa3.97□□□□□ -1.77
CDRT1-202ENST00000354433 LUZP6Q538Z0 58 aa3.96□□□□□ -1.78
CDRT1-202ENST00000354433 HMCN1Q96RW7 5635 aa3.92□□□□□ -1.78
CDRT1-202ENST00000354433 NDUFAF8A1L188 74 aa3.87□□□□□ -1.79
CDRT1-202ENST00000354433 KRTAP5-4Q6L8H1 288 aa3.87□□□□□ -1.79
CDRT1-202ENST00000354433 AHNAK2Q8IVF2 5795 aa3.76□□□□□ -1.81
CDRT1-202ENST00000354433 KRTAP5-10Q6L8G5 202 aa3.72□□□□□ -1.81
CDRT1-202ENST00000354433 KRTAP9-6A8MVA2 160 aa3.71□□□□□ -1.82
CDRT1-202ENST00000354433 KRTAP5-5Q701N2 237 aaPredicted RBP3.71□□□□□ -1.82
CDRT1-202ENST00000354433 KRTAP20-2Q3LI61 65 aa3.69□□□□□ -1.82
CDRT1-202ENST00000354433 SYNE1Q8NF91 8797 aaKnown RBP3.69□□□□□ -1.82
CDRT1-202ENST00000354433 KRTAP12-4P60329 112 aa3.68□□□□□ -1.82
CDRT1-202ENST00000354433 KRTAP5-7Q6L8G8 165 aa3.57□□□□□ -1.84
CDRT1-202ENST00000354433 MT1AP04731 61 aa3.46□□□□□ -1.85
CDRT1-202ENST00000354433 KRTAP6-1Q3LI64 71 aa3.45□□□□□ -1.86
CDRT1-202ENST00000354433 KRTAP5-2Q701N4 177 aa3.38□□□□□ -1.87
CDRT1-202ENST00000354433 KRTAP6-2Q3LI66 62 aa3.31□□□□□ -1.88
CDRT1-202ENST00000354433 OBSCNQ5VST9 7968 aa3.31□□□□□ -1.88
CDRT1-202ENST00000354433 INE1O15225 51 aa3.27□□□□□ -1.89
CDRT1-202ENST00000354433 KRTAP5-8O75690 187 aa3.25□□□□□ -1.89
CDRT1-202ENST00000354433 KRTAP5-11Q6L8G4 156 aa3.22□□□□□ -1.89
CDRT1-202ENST00000354433 MT3P25713 68 aa3.18□□□□□ -1.9
CDRT1-202ENST00000354433 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.17□□□□□ -1.9
CDRT1-202ENST00000354433 MUC5BQ9HC84 5762 aaPredicted RBP3.13□□□□□ -1.91
CDRT1-202ENST00000354433 MUC5ACP98088 5654 aa3.12□□□□□ -1.91
CDRT1-202ENST00000354433 AHNAKQ09666 5890 aaKnown RBP3.09□□□□□ -1.91
CDRT1-202ENST00000354433 LCE1EQ5T753 118 aa3.05□□□□□ -1.92
CDRT1-202ENST00000354433 KRTAP5-1Q6L8H4 278 aa3.04□□□□□ -1.92
CDRT1-202ENST00000354433 LCE3DQ9BYE3 92 aa2.99□□□□□ -1.93
CDRT1-202ENST00000354433 LCE3EQ5T5B0 92 aa2.92□□□□□ -1.94
CDRT1-202ENST00000354433 LCE1BQ5T7P3 118 aa2.8□□□□□ -1.96
CDRT1-202ENST00000354433 LCE1FQ5T754 118 aa2.74□□□□□ -1.97
CDRT1-202ENST00000354433 LCE1CQ5T751 118 aa2.7□□□□□ -1.98
CDRT1-202ENST00000354433 KRTAP4-4Q9BYR3 166 aa2.69□□□□□ -1.98
CDRT1-202ENST00000354433 PRM1P04553 51 aa2.55□□□□□ -2
CDRT1-202ENST00000354433 KRTAP21-2Q3LI59 83 aa2.25□□□□□ -2.05
CDRT1-202ENST00000354433 PHGR1C9JFL3 82 aa2.22□□□□□ -2.05
CDRT1-202ENST00000354433 MUC19Q7Z5P9 8384 aa2.05□□□□□ -2.08
CDRT1-202ENST00000354433 KRTAP21-1Q3LI58 79 aa1.66□□□□□ -2.14
CDRT1-202ENST00000354433 MUC16Q8WXI7 14507 aa1.42□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 63.6 ms