RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 A0A0A0MQY5 61 aa6.55□□□□□ -1.36
RAB5C-201ENST00000346213 PRO2289Q9P1D8 64 aa6.55□□□□□ -1.36
RAB5C-201ENST00000346213 KRTAP10-7P60409 375 aaPredicted RBP6.52□□□□□ -1.37
RAB5C-201ENST00000346213 SPRR2FQ96RM1 72 aa6.49□□□□□ -1.37
RAB5C-201ENST00000346213 KRTAP4-11Q9BYQ6 195 aa6.49□□□□□ -1.37
RAB5C-201ENST00000346213 KRTAP8-1Q8IUC2 63 aa6.44□□□□□ -1.38
RAB5C-201ENST00000346213 LUZP6Q538Z0 58 aa6.43□□□□□ -1.38
RAB5C-201ENST00000346213 KRTAP10-12P60413 245 aa6.41□□□□□ -1.38
RAB5C-201ENST00000346213 KRTAP20-1Q3LI63 56 aa6.41□□□□□ -1.38
RAB5C-201ENST00000346213 SPRR2EP22531 72 aa6.38□□□□□ -1.39
RAB5C-201ENST00000346213 SPRR2BP35325 72 aa6.38□□□□□ -1.39
RAB5C-201ENST00000346213 SPRR2AP35326 72 aa6.38□□□□□ -1.39
RAB5C-201ENST00000346213 LCE1AQ5T7P2 110 aa6.37□□□□□ -1.39
RAB5C-201ENST00000346213 TNP1P09430 55 aa6.34□□□□□ -1.39
RAB5C-201ENST00000346213 LCE4AQ5TA78 99 aa6.33□□□□□ -1.4
RAB5C-201ENST00000346213 PP632Q6XCG6 107 aa6.27□□□□□ -1.41
RAB5C-201ENST00000346213 KRTAP5-3Q6L8H2 238 aa6.24□□□□□ -1.41
RAB5C-201ENST00000346213 KRTAP23-1A1A580 65 aa6.23□□□□□ -1.41
RAB5C-201ENST00000346213 KRTAP2-3P0C7H8 128 aa6.23□□□□□ -1.41
RAB5C-201ENST00000346213 KRTAP2-4Q9BYR9 128 aa6.23□□□□□ -1.41
RAB5C-201ENST00000346213 SPRR2DP22532 72 aa6.15□□□□□ -1.42
RAB5C-201ENST00000346213 LCE5AQ5TCM9 118 aa6.12□□□□□ -1.43
RAB5C-201ENST00000346213 KRTAP19-7Q3SYF9 63 aa6.1□□□□□ -1.43
RAB5C-201ENST00000346213 KRTAP2-2Q9BYT5 123 aa6.04□□□□□ -1.44
RAB5C-201ENST00000346213 KRTAP2-1Q9BYU5 128 aa6.04□□□□□ -1.44
RAB5C-201ENST00000346213 LCE3AQ5TA76 89 aa6.03□□□□□ -1.44
RAB5C-201ENST00000346213 MT1EP04732 61 aa6.01□□□□□ -1.45
RAB5C-201ENST00000346213 GPR98Q8WXG9 6306 aa5.93□□□□□ -1.46
RAB5C-201ENST00000346213 SPRR5A0A1B0GTR4 108 aa5.92□□□□□ -1.46
RAB5C-201ENST00000346213 KRTAP19-5Q3LI72 72 aa5.91□□□□□ -1.46
RAB5C-201ENST00000346213 KRTAP19-3Q7Z4W3 81 aa5.89□□□□□ -1.47
RAB5C-201ENST00000346213 DSTQ03001 7570 aaKnown RBP5.84□□□□□ -1.48
RAB5C-201ENST00000346213 KRTAP12-3P60328 96 aa5.79□□□□□ -1.48
RAB5C-201ENST00000346213 KRTAP19-4Q3LI73 84 aa5.76□□□□□ -1.49
RAB5C-201ENST00000346213 INE1O15225 51 aa5.75□□□□□ -1.49
RAB5C-201ENST00000346213 MT1LQ93083 61 aa5.75□□□□□ -1.49
RAB5C-201ENST00000346213 MT1MQ8N339 61 aa5.71□□□□□ -1.5
RAB5C-201ENST00000346213 MT1GP13640 62 aa5.7□□□□□ -1.5
RAB5C-201ENST00000346213 KRTAP4-3Q9BYR4 195 aa5.69□□□□□ -1.5
RAB5C-201ENST00000346213 HMCN1Q96RW7 5635 aa5.46□□□□□ -1.53
RAB5C-201ENST00000346213 LCE3CQ5T5A8 94 aa5.43□□□□□ -1.54
RAB5C-201ENST00000346213 MT4P47944 62 aa5.42□□□□□ -1.54
RAB5C-201ENST00000346213 KRTAP5-4Q6L8H1 288 aa5.42□□□□□ -1.54
RAB5C-201ENST00000346213 KRTAP5-5Q701N2 237 aaPredicted RBP5.28□□□□□ -1.56
RAB5C-201ENST00000346213 AHNAK2Q8IVF2 5795 aa5.23□□□□□ -1.57
RAB5C-201ENST00000346213 KRTAP9-6A8MVA2 160 aa5.14□□□□□ -1.59
RAB5C-201ENST00000346213 KRTAP20-2Q3LI61 65 aa5.11□□□□□ -1.59
RAB5C-201ENST00000346213 KRTAP5-10Q6L8G5 202 aa5.1□□□□□ -1.59
RAB5C-201ENST00000346213 SYNE1Q8NF91 8797 aaKnown RBP5.07□□□□□ -1.6
RAB5C-201ENST00000346213 KRTAP12-4P60329 112 aa4.92□□□□□ -1.62
RAB5C-201ENST00000346213 KRTAP6-1Q3LI64 71 aa4.89□□□□□ -1.63
RAB5C-201ENST00000346213 MT1AP04731 61 aa4.85□□□□□ -1.63
RAB5C-201ENST00000346213 KRTAP5-7Q6L8G8 165 aa4.84□□□□□ -1.63
RAB5C-201ENST00000346213 KRTAP5-2Q701N4 177 aa4.77□□□□□ -1.65
RAB5C-201ENST00000346213 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.64□□□□□ -1.67
RAB5C-201ENST00000346213 KRTAP6-2Q3LI66 62 aa4.63□□□□□ -1.67
RAB5C-201ENST00000346213 AHNAKQ09666 5890 aaKnown RBP4.54□□□□□ -1.68
RAB5C-201ENST00000346213 KRTAP5-8O75690 187 aa4.51□□□□□ -1.69
RAB5C-201ENST00000346213 OBSCNQ5VST9 7968 aa4.46□□□□□ -1.7
RAB5C-201ENST00000346213 KRTAP5-11Q6L8G4 156 aa4.39□□□□□ -1.71
RAB5C-201ENST00000346213 MUC5BQ9HC84 5762 aaPredicted RBP4.38□□□□□ -1.71
RAB5C-201ENST00000346213 MT3P25713 68 aa4.36□□□□□ -1.71
RAB5C-201ENST00000346213 KRTAP5-1Q6L8H4 278 aa4.29□□□□□ -1.72
RAB5C-201ENST00000346213 MUC5ACP98088 5654 aa4.27□□□□□ -1.73
RAB5C-201ENST00000346213 LCE3DQ9BYE3 92 aa4.1□□□□□ -1.75
RAB5C-201ENST00000346213 LCE3EQ5T5B0 92 aa4□□□□□ -1.77
RAB5C-201ENST00000346213 LCE1EQ5T753 118 aa4□□□□□ -1.77
RAB5C-201ENST00000346213 KRTAP4-4Q9BYR3 166 aa3.85□□□□□ -1.79
RAB5C-201ENST00000346213 LCE1BQ5T7P3 118 aa3.81□□□□□ -1.8
RAB5C-201ENST00000346213 LCE1CQ5T751 118 aa3.74□□□□□ -1.81
RAB5C-201ENST00000346213 PRM1P04553 51 aa3.71□□□□□ -1.81
RAB5C-201ENST00000346213 KRTAP21-2Q3LI59 83 aa3.23□□□□□ -1.89
RAB5C-201ENST00000346213 LCE1FQ5T754 118 aa3.2□□□□□ -1.9
RAB5C-201ENST00000346213 PHGR1C9JFL3 82 aa2.95□□□□□ -1.94
RAB5C-201ENST00000346213 MUC19Q7Z5P9 8384 aa2.73□□□□□ -1.97
RAB5C-201ENST00000346213 KRTAP21-1Q3LI58 79 aa2.5□□□□□ -2.01
RAB5C-201ENST00000346213 MUC16Q8WXI7 14507 aa1.93□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 28.4 ms