RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 SPRR2FQ96RM1 72 aa5.57□□□□□ -1.52
TPM4-202ENST00000344824 C10orf95Q9H7T3 257 aa5.55□□□□□ -1.52
TPM4-202ENST00000344824 KRTAP10-7P60409 375 aaPredicted RBP5.52□□□□□ -1.53
TPM4-202ENST00000344824 SPRR2EP22531 72 aa5.48□□□□□ -1.53
TPM4-202ENST00000344824 SPRR2BP35325 72 aa5.48□□□□□ -1.53
TPM4-202ENST00000344824 SPRR2AP35326 72 aa5.48□□□□□ -1.53
TPM4-202ENST00000344824 PRO0628Q9UI54 55 aa5.47□□□□□ -1.53
TPM4-202ENST00000344824 ROMO1P60602 79 aa5.45□□□□□ -1.54
TPM4-202ENST00000344824 KRTAP20-1Q3LI63 56 aa5.45□□□□□ -1.54
TPM4-202ENST00000344824 KRTAP10-12P60413 245 aa5.44□□□□□ -1.54
TPM4-202ENST00000344824 PMAIP1Q13794 54 aa5.42□□□□□ -1.54
TPM4-202ENST00000344824 TNP1P09430 55 aa5.41□□□□□ -1.54
TPM4-202ENST00000344824 KRTAP25-1Q3LHN0 102 aa5.34□□□□□ -1.55
TPM4-202ENST00000344824 LCE1AQ5T7P2 110 aa5.34□□□□□ -1.55
TPM4-202ENST00000344824 KRTAP2-3P0C7H8 128 aa5.29□□□□□ -1.56
TPM4-202ENST00000344824 SPRR2DP22532 72 aa5.29□□□□□ -1.56
TPM4-202ENST00000344824 KRTAP2-4Q9BYR9 128 aa5.29□□□□□ -1.56
TPM4-202ENST00000344824 LCE3AQ5TA76 89 aa5.25□□□□□ -1.57
TPM4-202ENST00000344824 A0A0A0MQY5 61 aa5.19□□□□□ -1.58
TPM4-202ENST00000344824 PRAC1Q96KF2 57 aa5.14□□□□□ -1.59
TPM4-202ENST00000344824 KRTAP19-7Q3SYF9 63 aa5.13□□□□□ -1.59
TPM4-202ENST00000344824 KRTAP2-2Q9BYT5 123 aa5.13□□□□□ -1.59
TPM4-202ENST00000344824 KRTAP2-1Q9BYU5 128 aa5.13□□□□□ -1.59
TPM4-202ENST00000344824 KTN1-AS1Q86SY8 53 aa5.11□□□□□ -1.59
TPM4-202ENST00000344824 MT1EP04732 61 aa5.1□□□□□ -1.59
TPM4-202ENST00000344824 KRTAP19-5Q3LI72 72 aa5.1□□□□□ -1.59
TPM4-202ENST00000344824 PP632Q6XCG6 107 aa5.09□□□□□ -1.59
TPM4-202ENST00000344824 KRTAP19-3Q7Z4W3 81 aa5.05□□□□□ -1.6
TPM4-202ENST00000344824 KRTAP12-3P60328 96 aa5.02□□□□□ -1.61
TPM4-202ENST00000344824 DSTQ03001 7570 aaKnown RBP4.92□□□□□ -1.62
TPM4-202ENST00000344824 MT1GP13640 62 aa4.91□□□□□ -1.62
TPM4-202ENST00000344824 MT1LQ93083 61 aa4.89□□□□□ -1.63
TPM4-202ENST00000344824 MT1MQ8N339 61 aa4.86□□□□□ -1.63
TPM4-202ENST00000344824 KRTAP4-3Q9BYR4 195 aa4.77□□□□□ -1.65
TPM4-202ENST00000344824 LCE3CQ5T5A8 94 aa4.66□□□□□ -1.66
TPM4-202ENST00000344824 MT4P47944 62 aa4.63□□□□□ -1.67
TPM4-202ENST00000344824 HMCN1Q96RW7 5635 aa4.61□□□□□ -1.67
TPM4-202ENST00000344824 GPR98Q8WXG9 6306 aa4.55□□□□□ -1.68
TPM4-202ENST00000344824 KRTAP5-11Q6L8G4 156 aa4.54□□□□□ -1.68
TPM4-202ENST00000344824 KRTAP5-4Q6L8H1 288 aa4.52□□□□□ -1.69
TPM4-202ENST00000344824 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.5□□□□□ -1.69
TPM4-202ENST00000344824 AHNAK2Q8IVF2 5795 aa4.42□□□□□ -1.7
TPM4-202ENST00000344824 KRTAP9-6A8MVA2 160 aa4.41□□□□□ -1.7
TPM4-202ENST00000344824 SPRR5A0A1B0GTR4 108 aa4.4□□□□□ -1.7
TPM4-202ENST00000344824 KRTAP5-5Q701N2 237 aaPredicted RBP4.39□□□□□ -1.71
TPM4-202ENST00000344824 LCE1EQ5T753 118 aa4.37□□□□□ -1.71
TPM4-202ENST00000344824 KRTAP12-4P60329 112 aa4.3□□□□□ -1.72
TPM4-202ENST00000344824 KRTAP20-2Q3LI61 65 aa4.3□□□□□ -1.72
TPM4-202ENST00000344824 SYNE1Q8NF91 8797 aaKnown RBP4.3□□□□□ -1.72
TPM4-202ENST00000344824 MT3P25713 68 aa4.29□□□□□ -1.72
TPM4-202ENST00000344824 KRTAP5-10Q6L8G5 202 aa4.21□□□□□ -1.73
TPM4-202ENST00000344824 LUZP6Q538Z0 58 aa4.2□□□□□ -1.74
TPM4-202ENST00000344824 MT1AP04731 61 aa4.16□□□□□ -1.74
TPM4-202ENST00000344824 KRTAP6-1Q3LI64 71 aa4.14□□□□□ -1.75
TPM4-202ENST00000344824 KRTAP5-7Q6L8G8 165 aa4.02□□□□□ -1.77
TPM4-202ENST00000344824 KRTAP5-2Q701N4 177 aa3.97□□□□□ -1.77
TPM4-202ENST00000344824 NDUFAF8A1L188 74 aa3.96□□□□□ -1.77
TPM4-202ENST00000344824 KRTAP6-2Q3LI66 62 aa3.95□□□□□ -1.78
TPM4-202ENST00000344824 KRTAP5-1Q6L8H4 278 aa3.94□□□□□ -1.78
TPM4-202ENST00000344824 LCE1FQ5T754 118 aa3.88□□□□□ -1.79
TPM4-202ENST00000344824 OBSCNQ5VST9 7968 aa3.8□□□□□ -1.8
TPM4-202ENST00000344824 KRTAP4-4Q9BYR3 166 aa3.78□□□□□ -1.8
TPM4-202ENST00000344824 KRTAP5-8O75690 187 aa3.75□□□□□ -1.81
TPM4-202ENST00000344824 MUC5BQ9HC84 5762 aaPredicted RBP3.65□□□□□ -1.83
TPM4-202ENST00000344824 AHNAKQ09666 5890 aaKnown RBP3.61□□□□□ -1.83
TPM4-202ENST00000344824 MUC5ACP98088 5654 aa3.6□□□□□ -1.83
TPM4-202ENST00000344824 LCE3DQ9BYE3 92 aa3.47□□□□□ -1.85
TPM4-202ENST00000344824 LCE3EQ5T5B0 92 aa3.37□□□□□ -1.87
TPM4-202ENST00000344824 LCE1BQ5T7P3 118 aa3.32□□□□□ -1.88
TPM4-202ENST00000344824 INE1O15225 51 aa3.28□□□□□ -1.88
TPM4-202ENST00000344824 LCE1CQ5T751 118 aa3.18□□□□□ -1.9
TPM4-202ENST00000344824 PRM1P04553 51 aa2.85□□□□□ -1.95
TPM4-202ENST00000344824 KRTAP21-2Q3LI59 83 aa2.69□□□□□ -1.98
TPM4-202ENST00000344824 PHGR1C9JFL3 82 aa2.5□□□□□ -2.01
TPM4-202ENST00000344824 MUC19Q7Z5P9 8384 aa2.32□□□□□ -2.04
TPM4-202ENST00000344824 KRTAP21-1Q3LI58 79 aa1.86□□□□□ -2.11
TPM4-202ENST00000344824 MUC16Q8WXI7 14507 aa1.64□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 21.7 ms