RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 M0QZ58 72 aa4.36□□□□□ -1.71
TPM3-207ENST00000341372 SYNE2Q8WXH0 6885 aaKnown RBP4.35□□□□□ -1.71
TPM3-207ENST00000341372 KRTAP6-3Q3LI67 103 aa4.33□□□□□ -1.72
TPM3-207ENST00000341372 PLAC4Q8WY50 150 aa4.31□□□□□ -1.72
TPM3-207ENST00000341372 MT1XP80297 61 aa4.3□□□□□ -1.72
TPM3-207ENST00000341372 A0A0D9SG42 100 aa4.28□□□□□ -1.73
TPM3-207ENST00000341372 KRTAP12-1P59990 96 aa4.24□□□□□ -1.73
TPM3-207ENST00000341372 KRTAP12-2P59991 146 aa4.24□□□□□ -1.73
TPM3-207ENST00000341372 LCE3EQ5T5B0 92 aa4.22□□□□□ -1.73
TPM3-207ENST00000341372 SPRR5A0A1B0GTR4 108 aa4.2□□□□□ -1.74
TPM3-207ENST00000341372 KRTAP5-9P26371 169 aa4.2□□□□□ -1.74
TPM3-207ENST00000341372 KRTAP5-3Q6L8H2 238 aa4.14□□□□□ -1.75
TPM3-207ENST00000341372 MUC12Q9UKN1 5478 aa4.14□□□□□ -1.75
TPM3-207ENST00000341372 NEBP20929 6669 aa4.13□□□□□ -1.75
TPM3-207ENST00000341372 KMT2DO14686 5537 aa4.13□□□□□ -1.75
TPM3-207ENST00000341372 INE1O15225 51 aa4.09□□□□□ -1.75
TPM3-207ENST00000341372 KRTAP10-7P60409 375 aaPredicted RBP4.09□□□□□ -1.76
TPM3-207ENST00000341372 KRTAP8-1Q8IUC2 63 aa4.07□□□□□ -1.76
TPM3-207ENST00000341372 MDN1Q9NU22 5596 aa4.05□□□□□ -1.76
TPM3-207ENST00000341372 SPRR2FQ96RM1 72 aa4.04□□□□□ -1.76
TPM3-207ENST00000341372 C10orf95Q9H7T3 257 aa4.03□□□□□ -1.76
TPM3-207ENST00000341372 SPRR2EP22531 72 aa3.96□□□□□ -1.78
TPM3-207ENST00000341372 SPRR2BP35325 72 aa3.96□□□□□ -1.78
TPM3-207ENST00000341372 SPRR2AP35326 72 aa3.96□□□□□ -1.78
TPM3-207ENST00000341372 LCE1EQ5T753 118 aa3.95□□□□□ -1.78
TPM3-207ENST00000341372 KRTAP20-1Q3LI63 56 aa3.93□□□□□ -1.78
TPM3-207ENST00000341372 KRTAP2-3P0C7H8 128 aa3.86□□□□□ -1.79
TPM3-207ENST00000341372 KRTAP2-4Q9BYR9 128 aa3.86□□□□□ -1.79
TPM3-207ENST00000341372 KRTAP19-7Q3SYF9 63 aa3.85□□□□□ -1.79
TPM3-207ENST00000341372 SPRR2DP22532 72 aa3.83□□□□□ -1.8
TPM3-207ENST00000341372 MT1EP04732 61 aa3.8□□□□□ -1.8
TPM3-207ENST00000341372 PP632Q6XCG6 107 aa3.79□□□□□ -1.8
TPM3-207ENST00000341372 LCE3DQ9BYE3 92 aa3.79□□□□□ -1.8
TPM3-207ENST00000341372 TNP1P09430 55 aa3.78□□□□□ -1.8
TPM3-207ENST00000341372 KRTAP19-5Q3LI72 72 aa3.75□□□□□ -1.81
TPM3-207ENST00000341372 KRTAP19-3Q7Z4W3 81 aa3.75□□□□□ -1.81
TPM3-207ENST00000341372 KRTAP2-1Q9BYU5 128 aa3.75□□□□□ -1.81
TPM3-207ENST00000341372 LCE3AQ5TA76 89 aa3.72□□□□□ -1.81
TPM3-207ENST00000341372 MT1GP13640 62 aa3.66□□□□□ -1.82
TPM3-207ENST00000341372 MT1LQ93083 61 aa3.65□□□□□ -1.82
TPM3-207ENST00000341372 MT1MQ8N339 61 aa3.61□□□□□ -1.83
TPM3-207ENST00000341372 DSTQ03001 7570 aaKnown RBP3.6□□□□□ -1.83
TPM3-207ENST00000341372 KRTAP12-3P60328 96 aa3.58□□□□□ -1.84
TPM3-207ENST00000341372 KRTAP4-3Q9BYR4 195 aa3.49□□□□□ -1.85
TPM3-207ENST00000341372 KRTAP9-6A8MVA2 160 aa3.43□□□□□ -1.86
TPM3-207ENST00000341372 KRTAP5-4Q6L8H1 288 aa3.4□□□□□ -1.87
TPM3-207ENST00000341372 KRTAP5-5Q701N2 237 aaPredicted RBP3.33□□□□□ -1.88
TPM3-207ENST00000341372 HMCN1Q96RW7 5635 aa3.33□□□□□ -1.88
TPM3-207ENST00000341372 MT4P47944 62 aa3.32□□□□□ -1.88
TPM3-207ENST00000341372 KRTAP12-4P60329 112 aa3.32□□□□□ -1.88
TPM3-207ENST00000341372 GPR98Q8WXG9 6306 aa3.22□□□□□ -1.89
TPM3-207ENST00000341372 SYNE1Q8NF91 8797 aaKnown RBP3.18□□□□□ -1.9
TPM3-207ENST00000341372 KRTAP20-2Q3LI61 65 aa3.18□□□□□ -1.9
TPM3-207ENST00000341372 AHNAK2Q8IVF2 5795 aa3.17□□□□□ -1.9
TPM3-207ENST00000341372 MT1AP04731 61 aa3.12□□□□□ -1.91
TPM3-207ENST00000341372 KRTAP5-10Q6L8G5 202 aa3.1□□□□□ -1.91
TPM3-207ENST00000341372 KRTAP6-1Q3LI64 71 aa3.07□□□□□ -1.92
TPM3-207ENST00000341372 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.07□□□□□ -1.92
TPM3-207ENST00000341372 KRTAP5-11Q6L8G4 156 aa3.02□□□□□ -1.93
TPM3-207ENST00000341372 KRTAP5-2Q701N4 177 aa3.01□□□□□ -1.93
TPM3-207ENST00000341372 KRTAP5-7Q6L8G8 165 aa2.97□□□□□ -1.93
TPM3-207ENST00000341372 KRTAP6-2Q3LI66 62 aa2.9□□□□□ -1.94
TPM3-207ENST00000341372 KRTAP5-8O75690 187 aa2.78□□□□□ -1.96
TPM3-207ENST00000341372 OBSCNQ5VST9 7968 aa2.72□□□□□ -1.97
TPM3-207ENST00000341372 KRTAP5-1Q6L8H4 278 aa2.66□□□□□ -1.98
TPM3-207ENST00000341372 MUC5ACP98088 5654 aa2.63□□□□□ -1.99
TPM3-207ENST00000341372 MUC5BQ9HC84 5762 aaPredicted RBP2.59□□□□□ -1.99
TPM3-207ENST00000341372 AHNAKQ09666 5890 aaKnown RBP2.56□□□□□ -2
TPM3-207ENST00000341372 KRTAP4-4Q9BYR3 166 aa2.56□□□□□ -2
TPM3-207ENST00000341372 LCE1CQ5T751 118 aa2.46□□□□□ -2.02
TPM3-207ENST00000341372 LCE1BQ5T7P3 118 aa2.46□□□□□ -2.02
TPM3-207ENST00000341372 PRM1P04553 51 aa2.14□□□□□ -2.07
TPM3-207ENST00000341372 KRTAP21-2Q3LI59 83 aa2.04□□□□□ -2.08
TPM3-207ENST00000341372 MUC19Q7Z5P9 8384 aa1.98□□□□□ -2.09
TPM3-207ENST00000341372 PHGR1C9JFL3 82 aa1.87□□□□□ -2.11
TPM3-207ENST00000341372 KRTAP21-1Q3LI58 79 aa1.4□□□□□ -2.18
TPM3-207ENST00000341372 MUC16Q8WXI7 14507 aa1.24□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 335.6 ms