RNA–Protein interactions for RNA: ENST00000339569.9

MSL1-201, Transcript of male specific lethal 1 homolog, humanhuman

TSL 2

Gene MSL1, Length 3,424 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL1-201ENST00000339569 M0R2T5 61 aa2.1□□□□□ -2.07
MSL1-201ENST00000339569 KRTAP5-3Q6L8H2 238 aa2.1□□□□□ -2.07
MSL1-201ENST00000339569 PP632Q6XCG6 107 aa2.1□□□□□ -2.07
MSL1-201ENST00000339569 PLAC4Q8WY50 150 aa2.1□□□□□ -2.07
MSL1-201ENST00000339569 LCE3EQ5T5B0 92 aa2.09□□□□□ -2.08
MSL1-201ENST00000339569 KRTAP12-2P59991 146 aa2.07□□□□□ -2.08
MSL1-201ENST00000339569 C10orf95Q9H7T3 257 aa2.07□□□□□ -2.08
MSL1-201ENST00000339569 MT1FP04733 61 aa2.06□□□□□ -2.08
MSL1-201ENST00000339569 KMT2DO14686 5537 aa2.06□□□□□ -2.08
MSL1-201ENST00000339569 SYNE2Q8WXH0 6885 aaKnown RBP2.06□□□□□ -2.08
MSL1-201ENST00000339569 MT1BP07438 61 aa2.04□□□□□ -2.08
MSL1-201ENST00000339569 OBSCNQ5VST9 7968 aa2.03□□□□□ -2.08
MSL1-201ENST00000339569 FCGBPQ9Y6R7 5405 aaPredicted RBP2.02□□□□□ -2.09
MSL1-201ENST00000339569 KRTAP19-6Q3LI70 58 aa2.01□□□□□ -2.09
MSL1-201ENST00000339569 MACF1Q9UPN3 7388 aaKnown RBP2.01□□□□□ -2.09
MSL1-201ENST00000339569 KRTAP5-9P26371 169 aa2□□□□□ -2.09
MSL1-201ENST00000339569 KRTAP10-5P60370 271 aa2□□□□□ -2.09
MSL1-201ENST00000339569 GPR98Q8WXG9 6306 aa1.99□□□□□ -2.09
MSL1-201ENST00000339569 KRTAP10-12P60413 245 aa1.99□□□□□ -2.09
MSL1-201ENST00000339569 KRTAP2-1Q9BYU5 128 aa1.98□□□□□ -2.09
MSL1-201ENST00000339569 KRTAP10-10P60014 251 aa1.98□□□□□ -2.09
MSL1-201ENST00000339569 MUC5BQ9HC84 5762 aaPredicted RBP1.98□□□□□ -2.09
MSL1-201ENST00000339569 KRTAP5-7Q6L8G8 165 aa1.97□□□□□ -2.09
MSL1-201ENST00000339569 TNP1P09430 55 aa1.96□□□□□ -2.1
MSL1-201ENST00000339569 MT1XP80297 61 aa1.96□□□□□ -2.1
MSL1-201ENST00000339569 KRTAP8-1Q8IUC2 63 aa1.95□□□□□ -2.1
MSL1-201ENST00000339569 MUC12Q9UKN1 5478 aa1.94□□□□□ -2.1
MSL1-201ENST00000339569 LCE3DQ9BYE3 92 aa1.92□□□□□ -2.1
MSL1-201ENST00000339569 MDN1Q9NU22 5596 aa1.91□□□□□ -2.1
MSL1-201ENST00000339569 SPRR5A0A1B0GTR4 108 aa1.91□□□□□ -2.1
MSL1-201ENST00000339569 DSTQ03001 7570 aaKnown RBP1.9□□□□□ -2.11
MSL1-201ENST00000339569 AHNAKQ09666 5890 aaKnown RBP1.88□□□□□ -2.11
MSL1-201ENST00000339569 MT3P25713 68 aa1.87□□□□□ -2.11
MSL1-201ENST00000339569 A0A0D9SG42 100 aa1.86□□□□□ -2.11
MSL1-201ENST00000339569 KRTAP10-7P60409 375 aaPredicted RBP1.85□□□□□ -2.11
MSL1-201ENST00000339569 KRTAP5-10Q6L8G5 202 aa1.85□□□□□ -2.11
MSL1-201ENST00000339569 AHNAK2Q8IVF2 5795 aa1.81□□□□□ -2.12
MSL1-201ENST00000339569 MT1EP04732 61 aa1.77□□□□□ -2.13
MSL1-201ENST00000339569 LCE3AQ5TA76 89 aa1.77□□□□□ -2.13
MSL1-201ENST00000339569 KRTAP5-11Q6L8G4 156 aa1.77□□□□□ -2.13
MSL1-201ENST00000339569 KRTAP19-7Q3SYF9 63 aa1.76□□□□□ -2.13
MSL1-201ENST00000339569 KRTAP12-3P60328 96 aa1.75□□□□□ -2.13
MSL1-201ENST00000339569 HMCN1Q96RW7 5635 aa1.74□□□□□ -2.13
MSL1-201ENST00000339569 KRTAP12-4P60329 112 aa1.73□□□□□ -2.13
MSL1-201ENST00000339569 MT1GP13640 62 aa1.71□□□□□ -2.14
MSL1-201ENST00000339569 MT1LQ93083 61 aa1.71□□□□□ -2.14
MSL1-201ENST00000339569 KRTAP19-5Q3LI72 72 aa1.69□□□□□ -2.14
MSL1-201ENST00000339569 KRTAP19-3Q7Z4W3 81 aa1.68□□□□□ -2.14
MSL1-201ENST00000339569 SYNE1Q8NF91 8797 aaKnown RBP1.66□□□□□ -2.14
MSL1-201ENST00000339569 SPRR2FQ96RM1 72 aa1.65□□□□□ -2.14
MSL1-201ENST00000339569 MT1MQ8N339 61 aa1.64□□□□□ -2.15
MSL1-201ENST00000339569 SPRR2EP22531 72 aa1.61□□□□□ -2.15
MSL1-201ENST00000339569 SPRR2BP35325 72 aa1.61□□□□□ -2.15
MSL1-201ENST00000339569 SPRR2AP35326 72 aa1.61□□□□□ -2.15
MSL1-201ENST00000339569 KRTAP5-5Q701N2 237 aaPredicted RBP1.61□□□□□ -2.15
MSL1-201ENST00000339569 SPRR2DP22532 72 aa1.6□□□□□ -2.15
MSL1-201ENST00000339569 KRTAP4-3Q9BYR4 195 aa1.57□□□□□ -2.16
MSL1-201ENST00000339569 KRTAP5-4Q6L8H1 288 aa1.57□□□□□ -2.16
MSL1-201ENST00000339569 KRTAP9-6A8MVA2 160 aa1.56□□□□□ -2.16
MSL1-201ENST00000339569 MUC5ACP98088 5654 aa1.55□□□□□ -2.16
MSL1-201ENST00000339569 MT1AP04731 61 aa1.53□□□□□ -2.16
MSL1-201ENST00000339569 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.52□□□□□ -2.17
MSL1-201ENST00000339569 KRTAP5-1Q6L8H4 278 aa1.51□□□□□ -2.17
MSL1-201ENST00000339569 MUC19Q7Z5P9 8384 aa1.48□□□□□ -2.17
MSL1-201ENST00000339569 KRTAP5-2Q701N4 177 aa1.44□□□□□ -2.18
MSL1-201ENST00000339569 MT4P47944 62 aa1.41□□□□□ -2.18
MSL1-201ENST00000339569 KRTAP4-4Q9BYR3 166 aa1.4□□□□□ -2.19
MSL1-201ENST00000339569 KRTAP6-1Q3LI64 71 aa1.35□□□□□ -2.19
MSL1-201ENST00000339569 LCE1CQ5T751 118 aa1.34□□□□□ -2.19
MSL1-201ENST00000339569 LCE1BQ5T7P3 118 aa1.34□□□□□ -2.19
MSL1-201ENST00000339569 KRTAP5-8O75690 187 aa1.32□□□□□ -2.2
MSL1-201ENST00000339569 KRTAP20-2Q3LI61 65 aa1.31□□□□□ -2.2
MSL1-201ENST00000339569 KRTAP6-2Q3LI66 62 aa1.21□□□□□ -2.22
MSL1-201ENST00000339569 PRM1P04553 51 aa1.19□□□□□ -2.22
MSL1-201ENST00000339569 KRTAP21-2Q3LI59 83 aa0.98□□□□□ -2.25
MSL1-201ENST00000339569 PHGR1C9JFL3 82 aa0.94□□□□□ -2.26
MSL1-201ENST00000339569 KRTAP21-1Q3LI58 79 aa0.92□□□□□ -2.26
MSL1-201ENST00000339569 MUC16Q8WXI7 14507 aa0.65□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 5.5 ms