RNA–Protein interactions for RNA: ENST00000334841.10

CMC1-201, Transcript of C-X9-C motif containing 1, humanhuman

TSL 3

Gene CMC1, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-201ENST00000334841 KRTAP19-5Q3LI72 72 aa5.64□□□□□ -1.51
CMC1-201ENST00000334841 KRTAP4-2Q9BYR5 136 aa5.64□□□□□ -1.51
CMC1-201ENST00000334841 LCE5AQ5TCM9 118 aa5.63□□□□□ -1.51
CMC1-201ENST00000334841 KRTAP4-11Q9BYQ6 195 aa5.62□□□□□ -1.51
CMC1-201ENST00000334841 PRO0628Q9UI54 55 aa5.61□□□□□ -1.51
CMC1-201ENST00000334841 MT1EP04732 61 aa5.59□□□□□ -1.51
CMC1-201ENST00000334841 PMAIP1Q13794 54 aa5.59□□□□□ -1.51
CMC1-201ENST00000334841 KRTAP23-1A1A580 65 aa5.58□□□□□ -1.52
CMC1-201ENST00000334841 MUC12Q9UKN1 5478 aa5.57□□□□□ -1.52
CMC1-201ENST00000334841 SPRR2EP22531 72 aa5.53□□□□□ -1.52
CMC1-201ENST00000334841 SPRR2BP35325 72 aa5.53□□□□□ -1.52
CMC1-201ENST00000334841 SPRR2AP35326 72 aa5.53□□□□□ -1.52
CMC1-201ENST00000334841 LCE1AQ5T7P2 110 aa5.53□□□□□ -1.52
CMC1-201ENST00000334841 NEBP20929 6669 aa5.51□□□□□ -1.53
CMC1-201ENST00000334841 KRTAP12-3P60328 96 aa5.51□□□□□ -1.53
CMC1-201ENST00000334841 PP632Q6XCG6 107 aa5.49□□□□□ -1.53
CMC1-201ENST00000334841 MDN1Q9NU22 5596 aa5.49□□□□□ -1.53
CMC1-201ENST00000334841 KRTAP19-3Q7Z4W3 81 aa5.43□□□□□ -1.54
CMC1-201ENST00000334841 MT1LQ93083 61 aa5.42□□□□□ -1.54
CMC1-201ENST00000334841 SPRR2DP22532 72 aa5.34□□□□□ -1.55
CMC1-201ENST00000334841 MT1GP13640 62 aa5.33□□□□□ -1.56
CMC1-201ENST00000334841 PRAC1Q96KF2 57 aa5.32□□□□□ -1.56
CMC1-201ENST00000334841 KRTAP15-1Q3LI76 137 aa5.29□□□□□ -1.56
CMC1-201ENST00000334841 MT1MQ8N339 61 aa5.29□□□□□ -1.56
CMC1-201ENST00000334841 KTN1-AS1Q86SY8 53 aa5.26□□□□□ -1.57
CMC1-201ENST00000334841 KRTAP20-1Q3LI63 56 aa5.19□□□□□ -1.58
CMC1-201ENST00000334841 KRTAP4-3Q9BYR4 195 aa5.17□□□□□ -1.58
CMC1-201ENST00000334841 KRTAP2-3P0C7H8 128 aa5.16□□□□□ -1.58
CMC1-201ENST00000334841 KRTAP2-4Q9BYR9 128 aa5.16□□□□□ -1.58
CMC1-201ENST00000334841 LCE3CQ5T5A8 94 aa5.12□□□□□ -1.59
CMC1-201ENST00000334841 KRTAP2-2Q9BYT5 123 aa5.02□□□□□ -1.61
CMC1-201ENST00000334841 KRTAP2-1Q9BYU5 128 aa5.02□□□□□ -1.61
CMC1-201ENST00000334841 DSTQ03001 7570 aaKnown RBP5.02□□□□□ -1.61
CMC1-201ENST00000334841 SVIPQ8NHG7 77 aa4.97□□□□□ -1.61
CMC1-201ENST00000334841 KRTAP5-3Q6L8H2 238 aa4.89□□□□□ -1.63
CMC1-201ENST00000334841 KRTAP9-6A8MVA2 160 aa4.87□□□□□ -1.63
CMC1-201ENST00000334841 KRTAP5-5Q701N2 237 aaPredicted RBP4.82□□□□□ -1.64
CMC1-201ENST00000334841 KRTAP5-4Q6L8H1 288 aa4.76□□□□□ -1.65
CMC1-201ENST00000334841 SPRR5A0A1B0GTR4 108 aa4.75□□□□□ -1.65
CMC1-201ENST00000334841 MT4P47944 62 aa4.64□□□□□ -1.67
CMC1-201ENST00000334841 MT1AP04731 61 aa4.61□□□□□ -1.67
CMC1-201ENST00000334841 KRTAP6-1Q3LI64 71 aa4.57□□□□□ -1.68
CMC1-201ENST00000334841 SYNE1Q8NF91 8797 aaKnown RBP4.51□□□□□ -1.69
CMC1-201ENST00000334841 KRTAP12-4P60329 112 aa4.51□□□□□ -1.69
CMC1-201ENST00000334841 HMCN1Q96RW7 5635 aa4.5□□□□□ -1.69
CMC1-201ENST00000334841 KRTAP20-2Q3LI61 65 aa4.46□□□□□ -1.7
CMC1-201ENST00000334841 GPR98Q8WXG9 6306 aa4.36□□□□□ -1.71
CMC1-201ENST00000334841 LUZP6Q538Z0 58 aa4.33□□□□□ -1.72
CMC1-201ENST00000334841 KRTAP6-2Q3LI66 62 aa4.27□□□□□ -1.73
CMC1-201ENST00000334841 KRTAP5-2Q701N4 177 aa4.26□□□□□ -1.73
CMC1-201ENST00000334841 AHNAK2Q8IVF2 5795 aa4.2□□□□□ -1.74
CMC1-201ENST00000334841 MT3P25713 68 aa4.17□□□□□ -1.74
CMC1-201ENST00000334841 KRTAP5-10Q6L8G5 202 aa4.06□□□□□ -1.76
CMC1-201ENST00000334841 NDUFAF8A1L188 74 aa4□□□□□ -1.77
CMC1-201ENST00000334841 KRTAP5-7Q6L8G8 165 aa3.84□□□□□ -1.79
CMC1-201ENST00000334841 KRTAP5-8O75690 187 aa3.82□□□□□ -1.8
CMC1-201ENST00000334841 OBSCNQ5VST9 7968 aa3.81□□□□□ -1.8
CMC1-201ENST00000334841 KRTAP5-11Q6L8G4 156 aa3.79□□□□□ -1.8
CMC1-201ENST00000334841 LCE3DQ9BYE3 92 aa3.77□□□□□ -1.81
CMC1-201ENST00000334841 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.73□□□□□ -1.81
CMC1-201ENST00000334841 KRTAP5-1Q6L8H4 278 aa3.73□□□□□ -1.81
CMC1-201ENST00000334841 A0A0A0MQY5 61 aa3.72□□□□□ -1.81
CMC1-201ENST00000334841 LCE1EQ5T753 118 aa3.71□□□□□ -1.82
CMC1-201ENST00000334841 LCE3EQ5T5B0 92 aa3.62□□□□□ -1.83
CMC1-201ENST00000334841 MUC5ACP98088 5654 aa3.56□□□□□ -1.84
CMC1-201ENST00000334841 LCE1BQ5T7P3 118 aa3.47□□□□□ -1.85
CMC1-201ENST00000334841 MUC5BQ9HC84 5762 aaPredicted RBP3.45□□□□□ -1.86
CMC1-201ENST00000334841 LCE1CQ5T751 118 aa3.45□□□□□ -1.86
CMC1-201ENST00000334841 LCE1FQ5T754 118 aa3.44□□□□□ -1.86
CMC1-201ENST00000334841 AHNAKQ09666 5890 aaKnown RBP3.43□□□□□ -1.86
CMC1-201ENST00000334841 INE1O15225 51 aa3.26□□□□□ -1.89
CMC1-201ENST00000334841 KRTAP4-4Q9BYR3 166 aa3.11□□□□□ -1.91
CMC1-201ENST00000334841 PRM1P04553 51 aa3.01□□□□□ -1.93
CMC1-201ENST00000334841 KRTAP21-2Q3LI59 83 aa3.01□□□□□ -1.93
CMC1-201ENST00000334841 PHGR1C9JFL3 82 aa2.66□□□□□ -1.98
CMC1-201ENST00000334841 MUC19Q7Z5P9 8384 aa2.33□□□□□ -2.04
CMC1-201ENST00000334841 KRTAP21-1Q3LI58 79 aa1.77□□□□□ -2.13
CMC1-201ENST00000334841 MUC16Q8WXI7 14507 aa1.67□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 127.7 ms